| base64enc::base64 |
| Encode/decode data into/from base64 encoding |
| base64enc::checkUTF8 |
| Check the validity of a byte stream ot be interpreted as UTF8. |
| base64enc::dataURI |
| Create a data URI string |
| BH::BH-package |
| Boost C++ Header Files |
| bitops::bitAnd |
| Bitwise And, Or and Xor Operations |
| bitops::bitFlip |
| Binary Flip (Not) Operator |
| bitops::bitShiftL |
| Bitwise Shift Operator (to the Left or Right) |
| bitops::cksum |
| Compute Check Sum |
| brew::brew |
| Report Brewing For Text and R Output |
| brew::brewCache |
| Caching Brew Templates |
| bslib::accordion |
| Create a vertically collapsing accordion |
| bslib::bootswatch_themes |
| Obtain a list of all available bootswatch themes. |
| bslib::bs_add_variables |
| Add low-level theming customizations |
| bslib::bs_current_theme |
| Obtain the currently active theme at render time |
| bslib::bs_dependency |
| Themeable HTML components |
| bslib::bs_get_variables |
| Retrieve Sass variable values from the current theme |
| bslib::bs_global_theme |
| Global theming |
| bslib::bs_remove |
| Remove or retrieve Sass code from a theme |
| bslib::bs_theme |
| Create a Bootstrap theme |
| bslib::bs_theme_dependencies |
| Compile Bootstrap Sass with (optional) theming |
| bslib::bs_theme_preview |
| Preview a Bootstrap theme |
| bslib::builtin_themes |
| Obtain a list of all available built-in 'bslib' themes. |
| bslib::card |
| A Bootstrap card component |
| bslib::input_dark_mode |
| Dark mode input control |
| bslib::input_switch |
| Switch input control |
| bslib::layout_column_wrap |
| Column-first uniform grid layouts |
| bslib::layout_columns |
| Responsive 12-column grid layouts |
| bslib::nav-items |
| Navigation items |
| bslib::nav_select |
| Dynamically update nav containers |
| bslib::navset |
| Navigation containers |
| bslib::page_fillable |
| A screen-filling page layout |
| bslib::page_navbar |
| Multi-page app with a top navigation bar |
| bslib::page_sidebar |
| A sidebar page (i.e., dashboard) |
| bslib::popover |
| Add a popover to a UI element |
| bslib::theme_bootswatch |
| Obtain a theme's Bootswatch theme name |
| bslib::theme_version |
| Obtain a theme's Bootstrap version |
| bslib::tooltip |
| Add a tooltip to a UI element |
| bslib::value_box |
| Value box |
| bslib::versions |
| Available Bootstrap versions |
| Cairo::Cairo |
| Create a new Cairo-based graphics device |
| Cairo::Cairo.capabilities |
| Reports which output types are supported by this Cairo build |
| Cairo::Cairo.capture |
| Capture contents of an image backend or a display list snapshot. |
| Cairo::Cairo.onSave |
| Cairo callbacks |
| Cairo::Cairo.serial |
| Check for changes in the graphics state of Cairo devices. |
| Cairo::CairoFontMatch |
| Find installed fonts with a fontconfig pattern |
| Cairo::CairoFonts |
| Set the fonts used for all Cairo graphics devices. |
| cli::ansi-styles |
| ANSI colored text |
| cli::ansi_align |
| Align an ANSI colored string |
| cli::ansi_columns |
| Format a character vector in multiple columns |
| cli::ansi_has_any |
| Check if a string has some ANSI styling |
| cli::ansi_hide_cursor |
| Hide/show cursor in a terminal |
| cli::ansi_html |
| Convert ANSI styled text to HTML |
| cli::ansi_html_style |
| CSS styles for the output of 'ansi_html()' |
| cli::ansi_nchar |
| Count number of characters in an ANSI colored string |
| cli::truecolor |
| ANSI colors palettes |
| cli::ansi_regex |
| Perl compatible regular expression that matches ANSI escape sequences |
| cli::ansi_string |
| Labels a character vector as containing ANSI control codes. |
| cli::ansi_strip |
| Remove ANSI escape sequences from a string |
| cli::ansi_strsplit |
| Split an ANSI colored string |
| cli::ansi_strtrim |
| Truncate an ANSI string |
| cli::ansi_strwrap |
| Wrap an ANSI styled string to a certain width |
| cli::ansi_substr |
| Substring(s) of an ANSI colored string |
| cli::ansi_substring |
| Substring(s) of an ANSI colored string |
| cli::ansi_toupper |
| ANSI character translation and case folding |
| cli::ansi_trimws |
| Remove leading and/or trailing whitespace from an ANSI string |
| cli::cli_abort |
| Signal an error, warning or message with a cli formatted message |
| cli::cli_alert |
| CLI alerts |
| cli::cli_blockquote |
| CLI block quote |
| cli::cli_bullets |
| List of items |
| cli::cli_bullets_raw |
| List of verbatim items |
| cli::cli_dl |
| Definition list |
| cli::cli_h1 |
| CLI headings |
| cli::cli_li |
| CLI list item(s) |
| cli::cli_ol |
| Ordered CLI list |
| cli::cli_process_start |
| Indicate the start and termination of some computation in the status bar (superseded) |
| cli::cli_progress_along |
| Add a progress bar to a mapping function or for loop |
| cli::cli_progress_bar |
| cli progress bars |
| cli::cli_progress_builtin_handlers |
| cli progress handlers |
| cli::cli_progress_message |
| Simplified cli progress messages |
| cli::cli_progress_output |
| Add text output to a progress bar |
| cli::cli_progress_step |
| Simplified cli progress messages, with styling |
| cli::cli_progress_styles |
| List of built-in cli progress styles |
| cli::cli_rule |
| CLI horizontal rule |
| cli::cli_status |
| Update the status bar (superseded) |
| cli::cli_status_clear |
| Clear the status bar (superseded) |
| cli::cli_status_update |
| Update the status bar (superseded) |
| cli::cli_text |
| CLI text |
| cli::cli_ul |
| Unordered CLI list |
| cli::code_highlight |
| Syntax highlight R code |
| cli::code_theme_list |
| Syntax highlighting themes |
| cli::combine_ansi_styles |
| Combine two or more ANSI styles |
| cli::demo_spinners |
| Show a demo of some (by default all) spinners |
| cli::diff_chr |
| Compare two character vectors elementwise |
| cli::diff_str |
| Compare two character strings, character by character |
| cli::format_error |
| Format an error, warning or diagnostic message |
| cli::format_inline |
| Format and returns a line of text |
| cli::get_spinner |
| Character vector to put a spinner on the screen |
| cli::has_keypress_support |
| Check if the current platform/terminal supports reading single keys. |
| cli::hash_animal |
| Adjective-animal hash |
| cli::hash_emoji |
| Emoji hash |
| cli::hash_md5 |
| MD5 hash |
| cli::hash_sha1 |
| SHA-1 hash |
| cli::hash_sha256 |
| SHA-256 hash |
| cli::is_ansi_tty |
| Detect if a stream support ANSI escape characters |
| cli::is_dynamic_tty |
| Detect whether a stream supports \\r (Carriage return) |
| cli::keypress |
| Read a single keypress at the terminal |
| cli::list_spinners |
| List all available spinners |
| cli::make_ansi_style |
| Create a new ANSI style |
| cli::make_spinner |
| Create a spinner |
| cli::num_ansi_colors |
| Detect the number of ANSI colors to use |
| cli::no |
| Pluralization helper functions |
| cli::pluralization |
| About cli pluralization |
| cli::pluralize |
| String templating with pluralization |
| cli::cli_progress_num |
| Progress bar utility functions. |
| cli::progress-variables |
| Progress bar variables |
| cli::utf8_graphemes |
| Break an UTF-8 character vector into grapheme clusters |
| cli::utf8_nchar |
| Count the number of characters in a character vector |
| cli::utf8_substr |
| Substring of an UTF-8 string |
| curl::handle |
| Create and configure a curl handle |
| curl::handle_cookies |
| Extract cookies from a handle |
| digest::digest |
| Create hash function digests for arbitrary R objects or files |
| digest::digest2int |
| hash arbitrary string to integer |
| digest::hmac |
| compute a hash-based message authentication code |
| digest::getVDigest |
| Set a vectorised function for creating hash function digests |
| FastRWeb::FastRWeb |
| FastRWeb - infratructure to serve web pages with R scripts efficiently |
| FastRWeb::WebPlot |
| Graphics device for inclusion of plots in FastRWeb results. |
| FastRWeb::WebResult |
| Result object of a FastRWeb script |
| FastRWeb::add.header |
| Add HTML headers to FastRWeb response. |
| FastRWeb::done |
| FastRWeb interface functions |
| FastRWeb::oselection |
| Functions aiding in creating HTML form elements. |
| FastRWeb::out |
| FastRWeb HTML output functions |
| FastRWeb::parse.multipart |
| Parsing of POST request multi-part body. |
| FastRWeb::arequest |
| FastRWeb asynchronous (AJAX) requests |
| fastshp::as.shp |
| Coerce objects to shapefiles |
| fastshp::centr |
| Compute shape centroids and areas. |
| fastshp::inside |
| Finds shapes that contain given points |
| fastshp::merge.tiles |
| Merges adjacent tiles (polygons) where possible |
| fastshp::plot.shp |
| Plot shape files |
| fastshp::read.shp |
| Read ESRI shapefile |
| fastshp::thin |
| Thin out polyline/polygon by removing unneeded points. |
| fasttime::fastPOSIXct |
| Fast version of 'as.POSIXct.character' for GMT fixed format. |
| github::github |
| github-package: use the Github API from R |
| hmapred::.default.formatter |
| Default formatter for hmr |
| hmapred::hadoop |
| Experimental Hadoop chunk-processing code |
| httr::BROWSE |
| Open specified url in browser. |
| httr::DELETE |
| Send a DELETE request. |
| httr::GET |
| GET a url. |
| httr::HEAD |
| Get url HEADers. |
| httr::PATCH |
| Send PATCH request to a server. |
| httr::POST |
| POST file to a server. |
| httr::PUT |
| Send PUT request to server. |
| httr::VERB |
| VERB a url. |
| httr::add_headers |
| Add additional headers to a request. |
| httr::authenticate |
| Use http authentication. |
| httr::config |
| Set curl options. |
| httr::content |
| Extract content from a request. |
| httr::http_error |
| Check for an http error. |
| httr::http_status |
| Give information on the status of a request. |
| httr::oauth1.0_token |
| Generate an oauth1.0 token. |
| httr::oauth2.0_token |
| Generate an oauth2.0 token. |
| httr::oauth_app |
| Create an OAuth application. |
| httr::oauth_endpoint |
| Describe an OAuth endpoint. |
| httr::oauth_service_token |
| Generate OAuth token for service accounts. |
| httr::response |
| The response object. |
| httr::set_config |
| Set (and reset) global httr configuration. |
| httr::set_cookies |
| Set cookies. |
| httr::stop_for_status |
| Take action on http error. |
| httr::timeout |
| Set maximum request time. |
| httr::use_proxy |
| Use a proxy to connect to the internet. |
| httr::user_agent |
| Set user agent. |
| httr::verbose |
| Give verbose output. |
| httr::with_config |
| Execute code with configuration set. |
| iotools::as.output |
| Character Output |
| iotools::chunk |
| Functions for very fast chunk-wise processing |
| iotools::chunk.apply |
| Process input by applying a function to each chunk |
| iotools::chunk.map |
| Map a function over a file by chunks |
| iotools::ctapply |
| Fast tapply() replacement functions |
| iotools::.default.formatter |
| Default formatter, coorisponding to the as.output functions |
| iotools::dstrfw |
| Split fixed width input into a dataframe |
| iotools::dstrsplit |
| Split binary or character input into a dataframe |
| iotools::fdrbind |
| Fast row-binding of lists and data frames |
| iotools::idstrsplit |
| Create an iterator for splitting binary or character input into a dataframe |
| iotools::imstrsplit |
| Create an iterator for splitting binary or character input into a matrix |
| iotools::input.file |
| Load a file on the disk |
| iotools::line.merge |
| Merge multiple sources |
| iotools::mstrsplit |
| Split binary or character input into a matrix |
| iotools::output.file |
| Write an R object to a file as a character string |
| iotools::read.csv.raw |
| Fast data frame input |
| iotools::which.min.key |
| Determine the next key in bytewise order |
| iotools::write.csv.raw |
| Fast data output to disk |
| knitr::all_patterns |
| All built-in patterns |
| knitr::cache_engines |
| Cache engines of other languages |
| knitr::knit_code |
| The code manager to manage code in all chunks |
| knitr::knit_engines |
| Engines of other languages |
| knitr::knit_hooks |
| Hooks for R code chunks, inline R code and output |
| knitr::knit_patterns |
| Patterns to match and extract R code in a document |
| knitr::knit_theme |
| Syntax highlighting themes |
| knitr::opts_chunk |
| Default and current chunk options |
| knitr::opts_hooks |
| Hooks for code chunk options |
| knitr::opts_knit |
| Options for the knitr package |
| knitr::opts_template |
| Template for creating reusable chunk options |
| knitr::rand_seed |
| An unevaluated expression to return .Random.seed if exists |
| mime::mimemap |
| Tables for mapping filename extensions to MIME types |
| PKI::ASN1 |
| Functions for handling ASN.1 format (typically DER) |
| PKI::BIGNUMint |
| Functions for BIGNUM representation of arbitrarily precise integers |
| PKI::PKI.crypt |
| PKI encryption/decryption functions |
| PKI::PKI.digest |
| Compute digest sum based on SHA1, SHA256 or MD5 hash functions |
| PKI::PKI.genpass |
| Generate cryptographically strong pseudo-random password. |
| PKI::PKI.info |
| Retrieve PKI back-end information |
| PKI::PKI.random |
| Generate cryptographically strong pseudo-random bytes. |
| PKI::PKI.sign |
| PKI: sign content or verify a signature |
| PKI::PKI.sign.tar |
| Functions for signing and verification of tar files |
| PKI::RSA |
| PKI functions handling RSA keys |
| PKI::X509 |
| Public Key Instraftructure (X509) functions |
| PKI::oid |
| OBJECT IDENTIFIER Functions |
| PKI::raw2hex |
| Convert raw vector to string hex representation |
| png::readPNG |
| Read a bitmap image stored in the PNG format |
| png::writePNG |
| Write a bitmap image in PNG format |
| rcleaflet::lmap |
| Create an interactive map |
| rcleaflet::lpoints |
| Add objects to an interactive Leaflet map |
| rcloud.support::RCloudDevice |
| Creates an RCloud graphics devices |
| rcloud.support::dev.resize |
| Resize device |
| rcloud.support::rcloud.call.notebook |
| Execute code contained in a notebook |
| rcloud.support::rcloud.download.file |
| Cause the browser to download a file |
| rcloud.support::rcloud.encrypt |
| Encrypt/decrypt objects |
| rcloud.support::rcloud.get.asset |
| Access and execute notebook assets |
| rcloud.support::rcloud.home |
| Get path in user's RCloud home directory |
| rcloud.support::rcloud.html.out |
| Direct output functions in RCloud |
| rcloud.support::rcloud.install.js.module |
| Create a JavaScript module |
| rcloud.support::rcloud.read.pem |
| Read and write encrypted content in PEM format |
| rcloud.support::rcloud.session.info |
| Get information about an RCloud session |
| rcloud.support::rcloud.session.log |
| Send a string to the session pane. |
| rcloud.support::rcloud.session.notebook |
| Access notebook currently loaded in the session |
| rcloud.support::rcloud.upload.path |
| Get file upload location. |
| rcloud.support::start.rcloud |
| Functions to setup RCloud sessions |
| rcloud.web::rcw.collect |
| Collect a FastRWeb result so it can be set as a content. |
| rcloud.web::rcw.result |
| Create an RCloudWeb result for display |
| rcloud.web::rcw.append |
| DOM element manipulation functions |
| rcloud.web::rcw.url |
| Retrieve properties from the current document |
| Rcpp::C++Class-class |
| Reflection information for an internal c++ class |
| Rcpp::C++Constructor-class |
| Class "C++Constructor" |
| Rcpp::C++Field-class |
| Class "C++Field" |
| Rcpp::C++Function-class |
| Class "C++Function" |
| Rcpp::C++Object-class |
| c++ internal objects |
| Rcpp::C++OverloadedMethods-class |
| Class "C++OverloadedMethods" |
| Rcpp::.DollarNames-methods |
| completion |
| Rcpp::Module-class |
| Rcpp modules |
| Rcpp::Module |
| Retrieves an Rcpp module |
| Rcpp::Rcpp-deprecated |
| Deprecated Functions in the Rcpp Package |
| Rcpp::Rcpp-internal |
| Rcpp internal functions |
| Rcpp::Rcpp-package |
| R / C++ interface |
| Rcpp::Rcpp.package.skeleton |
| Create a skeleton for a new package depending on Rcpp |
| Rcpp::Rcpp.plugin.maker |
| Facilitating making package plugins |
| Rcpp::LdFlags |
| Deprecated Rcpp Linker Flags |
| Rcpp::RcppUnitTests |
| Rcpp : unit tests results |
| Rcpp::demangle |
| c++ type information |
| Rcpp::exposeClass |
| Create an Rcpp Module to Expose a C++ Class in R |
| Rcpp::formals<--methods |
| Set the formal arguments of a C++ function |
| Rcpp::loadModule |
| Load an Rcpp Module into a Package |
| Rcpp::loadRcppModules |
| Loads Rcpp modules on package startup |
| Rcpp::populate |
| Populates a namespace or an environment with the content of a module |
| Rcpp::setRcppClass |
| Create a Class Extending a C++ Class |
| RcppTOML::RcppTOML-package |
| R Access to Parser for TOML (Tom's Obvious Markup Language) |
| RCurl::AUTH_ANY |
| Constants for identifying Authentication Schemes |
| RCurl::CFILE |
| Create a C-level handle for a file |
| RCurl::CURLHandle-class |
| Class "CURLHandle" for synchronous HTTP requests |
| RCurl::CurlFeatureBits |
| Constants for libcurl |
| RCurl::HTTP_VERSION_1_0 |
| Symbolic constants for specifying HTTP and SSL versions in libcurl |
| RCurl::MultiCURLHandle-class |
| Class "MultiCURLHandle" for asynchronous, concurrent HTTP requests |
| RCurl::coerce,numeric,NetrcEnum-method |
| Internal functions |
| RCurl::base64 |
| Encode/Decode base64 content |
| RCurl::basicHeaderGatherer |
| Functions for processing the response header of a libcurl request |
| RCurl::basicTextGatherer |
| Cumulate text across callbacks (from an HTTP response) |
| RCurl::binaryBuffer |
| Create internal C-level data structure for collecting binary data |
| RCurl::chunkToLineReader |
| Utility that collects data from the HTTP reply into lines and calls user-provided function. |
| RCurl::clone |
| Clone/duplicate an object |
| RCurl::complete |
| Complete an asynchronous HTTP request |
| RCurl::curlError |
| Raise a warning or error about a CURL problem |
| RCurl::curlEscape |
| Handle characters in URL that need to be escaped |
| RCurl::curlGlobalInit |
| Start and stop the Curl library |
| RCurl::curlOptions |
| Constructor and accessors for CURLOptions objects |
| RCurl::curlPerform |
| Perform the HTTP query |
| RCurl::curlSetOpt |
| Set values for the CURL options |
| RCurl::curlVersion |
| Information describing the Curl library |
| RCurl::dynCurlReader |
| Dynamically determine content-type of body from HTTP header and set body reader |
| RCurl::|,BitwiseValue,BitwiseValue-method |
| Classes and coercion methods for enumerations in libcurl |
| RCurl::fileUpload |
| Specify information about a file to upload in an HTTP request |
| RCurl::findHTTPHeaderEncoding |
| Find the encoding of the HTTP response from the HTTP header |
| RCurl::ftpUpload |
| Upload content via FTP |
| RCurl::getBinaryURL |
| Download binary content |
| RCurl::getBitIndicators |
| Operate on bit fields |
| RCurl::getCurlErrorClassNames |
| Retrieve names of all curl error classes |
| RCurl::getCurlHandle |
| Create libcurl handles |
| RCurl::getCurlInfo |
| Access information about a CURL request |
| RCurl::getFormParams |
| Extract parameters from a form query string |
| RCurl::getURIAsynchronous |
| Download multiple URIs concurrently, with inter-leaved downloads |
| RCurl::getURL |
| Download a URI |
| RCurl::guessMIMEType |
| Infer the MIME type from a file name |
| RCurl::httpPUT |
| Simple high-level functions for HTTP PUT and DELETE |
| RCurl::merge.list |
| Method for merging two lists by name |
| RCurl::mimeTypeExtensions |
| Mapping from extension to MIME type |
| RCurl::postForm |
| Submit an HTML form |
| RCurl::reset |
| Generic function for resetting an object |
| RCurl::scp |
| Retrieve contents of a file from a remote host via SCP (Secure Copy) |
| rediscc::redis.auth |
| Authenticate redis connection |
| rediscc::redis.connect |
| Manage connections to a Redis database |
| rediscc::redis.expire |
| Set key lifetime |
| rediscc::redis.get |
| Get/set/query database content |
| rediscc::redis.pop |
| Redis queues |
| rediscc::redis.zero |
| Counter key operations |
| reticulate::install_miniconda |
| Install Miniconda |
| reticulate::miniconda_path |
| Path to Miniconda |
| reticulate::miniconda_uninstall |
| Remove Miniconda |
| reticulate::miniconda_update |
| Update Miniconda |
| reticulate::py |
| Interact with the Python Main Module |
| reticulate::py_get_item |
| Get/Set/Delete an item from a Python object |
| rjson::fromJSON |
| Convert JSON To R |
| rjson::newJSONParser |
| Convert buffered JSON objects To R |
| rjson::rjson |
| JSON for R |
| rjson::toJSON |
| Convert R To JSON |
| rlang::check_dots_empty |
| Check that dots are empty |
| rlang::check_dots_unnamed |
| Check that all dots are unnamed |
| rlang::check_dots_used |
| Check that all dots have been used |
| rlang::dot-data |
| '.data' and '.env' pronouns |
| rlang::local_options |
| Change global options |
| rlang::missing |
| Missing values |
| rlang::new_weakref |
| Create a weak reference |
| rmarkdown::metadata |
| The YAML metadata of the current R Markdown document |
| Rook::App-class |
| Class 'App' |
| Rook::Brewery-class |
| Class 'Brewery' |
| Rook::Builder-class |
| Class 'Builder' |
| Rook::File-class |
| Class 'File' |
| Rook::Middleware-class |
| Class 'Middleware' |
| Rook::Mime-class |
| Class 'Mime' and object 'Mime' |
| Rook::Multipart-class |
| Class 'Multipart' and object 'Multipart' |
| Rook::Redirect-class |
| Class 'Redirect' |
| Rook::Request-class |
| Class 'Request' |
| Rook::Response-class |
| Class 'Response' |
| Rook::Rhttpd-class |
| Class 'Rhttpd' |
| Rook::RhttpdApp-class |
| Class 'RhttpdApp' |
| Rook::RhttpdErrorStream-class |
| Class 'RhttpdErrorStream' |
| Rook::RhttpdInputStream-class |
| Class 'RhttpdInputStream' |
| Rook::Rook-package |
| Rook: A web server interface and package for R |
| Rook::Server |
| Rook Server Object |
| Rook::Static-class |
| Class 'Static' |
| Rook::URLMap-class |
| Class 'URLMap' |
| Rook::Utils-class |
| Class 'Utils' |
| Rook::is_rookable |
| Test for Rookable applications |
| Rook::suspend_console |
| Suspend the R console |
| rprojroot::criteria |
| Prespecified criteria |
| RSclient::RC-methods |
| Methods for the RserveConnection class |
| RSclient::RCC |
| Functions to talk to an Rserve instance (new version) |
| RSclient::Rclient |
| Functions to talk to an Rserve |
| Rserve::Rserve |
| Server providing R functionality to applications via TCP/IP or local unix sockets |
| Rserve::Rserve.eval |
| Evaluate expressions in a REPL-like fashion |
| Rserve::ocap |
| Object Capability (OCAP) Functions |
| Rserve::run.Rserve |
| Start Rserve within the current R process. |
| Rserve::self.ctrlEval |
| Functions usable for R code run inside Rserve |
| Rserve::ulog |
| Micro Logging |
| sendmailR::sendmail |
| Send mail from within R |
| snippets::add.layout |
| Functions designed to create non-overlaping layout of rectangles or labels. |
| snippets::cloud |
| Word cloud (aka tag cloud) plot |
| snippets::col.base |
| Flexible quantitative color schemes |
| snippets::fd |
| Fluctuation diagram |
| snippets::gpx |
| Create a GPX (GPS Exchange Format) output. |
| snippets::mfrow |
| Recursive grid layout functions for graphics |
| snippets::osm.xy2ll |
| Tools converting from lat/lon coordinates to OSM tiles and back. |
| snippets::osmap |
| Draw tiles from OpenStreetMap or any other compatible tile source. |
| snippets::rfBin |
| Read binary file |
| snippets::scheme |
| Scheme hanlding functions |
| snippets::screen2data |
| Functions converting between pixel and data coordinates. |
| snippets::setup.figure |
| Method defining a layout scheme |
| stringi::about_arguments |
| Passing Arguments to Functions in 'stringi' |
| stringi::about_encoding |
| Character Encodings and 'stringi' |
| stringi::about_locale |
| Locales and 'stringi' |
| stringi::about_search |
| String Searching |
| stringi::about_search_boundaries |
| Text Boundary Analysis in 'stringi' |
| stringi::about_search_charclass |
| Character Classes in 'stringi' |
| stringi::about_search_coll |
| Locale-Sensitive Text Searching in 'stringi' |
| stringi::about_search_fixed |
| Locale-Insensitive Fixed Pattern Matching in 'stringi' |
| stringi::about_search_regex |
| Regular Expressions in 'stringi' |
| stringi::about_stringi |
| Fast and Portable Character String Processing in R |
| stringi::%s+% |
| Concatenate Two Character Vectors |
| stringi::%s<% |
| Compare Strings with or without Collation |
| stringi::%s$% |
| C-Style Formatting with 'stri_sprintf' as a Binary Operator |
| stringi::stri_compare |
| Compare Strings with or without Collation |
| stringi::stri_count |
| Count the Number of Pattern Occurrences |
| stringi::stri_count_boundaries |
| Count the Number of Text Boundaries |
| stringi::stri_datetime_add |
| Date and Time Arithmetic |
| stringi::stri_datetime_create |
| Create a Date-Time Object |
| stringi::stri_datetime_fields |
| Get Values for Date and Time Fields |
| stringi::stri_datetime_format |
| Date and Time Formatting and Parsing |
| stringi::stri_datetime_fstr |
| Convert 'strptime'-Style Format Strings |
| stringi::stri_datetime_now |
| Get Current Date and Time |
| stringi::stri_datetime_symbols |
| List Localizable Date-Time Formatting Data |
| stringi::stri_detect |
| Detect Pattern Occurrences |
| stringi::stri_dup |
| Duplicate Strings |
| stringi::stri_duplicated |
| Determine Duplicated Elements |
| stringi::stri_enc_detect |
| Detect Character Set and Language |
| stringi::stri_enc_detect2 |
| [DEPRECATED] Detect Locale-Sensitive Character Encoding |
| stringi::stri_enc_fromutf32 |
| Convert From UTF-32 |
| stringi::stri_enc_info |
| Query a Character Encoding |
| stringi::stri_enc_isascii |
| Check If a Data Stream Is Possibly in ASCII |
| stringi::stri_enc_isutf16be |
| Check If a Data Stream Is Possibly in UTF-16 or UTF-32 |
| stringi::stri_enc_isutf8 |
| Check If a Data Stream Is Possibly in UTF-8 |
| stringi::stri_enc_list |
| List Known Character Encodings |
| stringi::stri_enc_mark |
| Get Declared Encodings of Each String |
| stringi::stri_enc_set |
| Set or Get Default Character Encoding in 'stringi' |
| stringi::stri_enc_toascii |
| Convert To ASCII |
| stringi::stri_enc_tonative |
| Convert Strings To Native Encoding |
| stringi::stri_enc_toutf32 |
| Convert Strings To UTF-32 |
| stringi::stri_enc_toutf8 |
| Convert Strings To UTF-8 |
| stringi::stri_encode |
| Convert Strings Between Given Encodings |
| stringi::stri_escape_unicode |
| Escape Unicode Code Points |
| stringi::stri_extract_all |
| Extract Pattern Occurrences |
| stringi::stri_extract_all_boundaries |
| Extract Data Between Text Boundaries |
| stringi::stri_flatten |
| Flatten a String |
| stringi::stri_info |
| Query Default Settings for 'stringi' |
| stringi::stri_isempty |
| Determine if a String is of Length Zero |
| stringi::stri_join |
| Concatenate Character Vectors |
| stringi::stri_join_list |
| Concatenate Strings in a List |
| stringi::stri_length |
| Count the Number of Code Points |
| stringi::stri_list2matrix |
| Convert a List to a Character Matrix |
| stringi::stri_locale_info |
| Query Given Locale |
| stringi::stri_locale_list |
| List Available Locales |
| stringi::stri_locale_set |
| Set or Get Default Locale in 'stringi' |
| stringi::stri_locate_all |
| Locate Pattern Occurrences |
| stringi::stri_locate_all_boundaries |
| Locate Text Boundaries |
| stringi::stri_match_all |
| Extract Regex Pattern Matches, Together with Capture Groups |
| stringi::stri_na2empty |
| Replace NAs with Empty Strings |
| stringi::stri_numbytes |
| Count the Number of Bytes |
| stringi::stri_opts_brkiter |
| Generate a List with BreakIterator Settings |
| stringi::stri_opts_collator |
| Generate a List with Collator Settings |
| stringi::stri_opts_fixed |
| Generate a List with Fixed Pattern Search Engine's Settings |
| stringi::stri_opts_regex |
| Generate a List with Regex Matcher Settings |
| stringi::stri_order |
| Ordering Permutation |
| stringi::stri_pad_both |
| Pad (Center/Left/Right Align) a String |
| stringi::stri_rand_lipsum |
| A Lorem Ipsum Generator |
| stringi::stri_rand_shuffle |
| Randomly Shuffle Code Points in Each String |
| stringi::stri_rand_strings |
| Generate Random Strings |
| stringi::stri_rank |
| Ranking |
| stringi::stri_read_lines |
| Read Text Lines from a Text File |
| stringi::stri_read_raw |
| Read Text File as Raw |
| stringi::stri_remove_empty |
| Remove All Empty Strings from a Character Vector |
| stringi::stri_replace_all |
| Replace Pattern Occurrences |
| stringi::stri_replace_na |
| Replace Missing Values in a Character Vector |
| stringi::stri_replace_rstr |
| Convert gsub-Style Replacement Strings |
| stringi::stri_sort |
| String Sorting |
| stringi::stri_sort_key |
| Sort Keys |
| stringi::stri_split |
| Split a String By Pattern Matches |
| stringi::stri_split_boundaries |
| Split a String at Text Boundaries |
| stringi::stri_split_lines |
| Split a String Into Text Lines |
| stringi::stri_sprintf |
| Format Strings |
| stringi::stri_startswith |
| Determine if the Start or End of a String Matches a Pattern |
| stringi::stri_stats_general |
| General Statistics for a Character Vector |
| stringi::stri_stats_latex |
| Statistics for a Character Vector Containing LaTeX Commands |
| stringi::stri_sub |
| Extract a Substring From or Replace a Substring In a Character Vector |
| stringi::stri_sub_all |
| Extract or Replace Multiple Substrings |
| stringi::stri_subset |
| Select Elements that Match a Given Pattern |
| stringi::stri_timezone_info |
| Query a Given Time Zone |
| stringi::stri_timezone_list |
| List Available Time Zone Identifiers |
| stringi::stri_timezone_get |
| Set or Get Default Time Zone in 'stringi' |
| stringi::stri_trans_tolower |
| Transform Strings with Case Mapping or Folding |
| stringi::stri_trans_char |
| Translate Characters |
| stringi::stri_trans_general |
| General Text Transforms, Including Transliteration |
| stringi::stri_trans_list |
| List Available Text Transforms and Transliterators |
| stringi::stri_trans_nfc |
| Perform or Check For Unicode Normalization |
| stringi::stri_trim_both |
| Trim Characters from the Left and/or Right Side of a String |
| stringi::stri_unescape_unicode |
| Un-escape All Escape Sequences |
| stringi::stri_unique |
| Extract Unique Elements |
| stringi::stri_width |
| Determine the Width of Code Points |
| stringi::stri_wrap |
| Word Wrap Text to Format Paragraphs |
| stringi::stri_write_lines |
| Write Text Lines to a Text File |
| stringr::stringr-data |
| Sample character vectors for practicing string manipulations |
| sys::exec |
| Running System Commands |
| sys::exec_r |
| Execute R from R |
| ulog::ulog |
| System logging functions |
| unixtools::chown |
| Change the ownership of files or other file system objects. |
| unixtools::set.tempdir |
| Change R's temporary directory |
| unixtools::set.user |
| Switch user for the current process |
| unixtools::stack.info |
| Get C stack usage information |
| unixtools::user.info |
| Get unix user information |
| uuid::UUID |
| UUID Data Type |
| uuid::UUIDgenerate |
| UUID Functions |
| withr::defer |
| Defer Evaluation of an Expression |
| withr::with_libpaths |
| Library paths |
| withr::with_temp_libpaths |
| Library paths |
| xfun::download_cache |
| Download a file from a URL and cache it on disk |
| xfun::proj_root |
| Return the (possible) root directory of a project |
| yaml::as.yaml |
| Convert an R object into a YAML string |
| yaml::read_yaml |
| Read a YAML file |
| yaml::verbatim_logical |
| Alternative logical handler |
| yaml::write_yaml |
| Write a YAML file |
| yaml::yaml.load |
| Convert a YAML string into R objects |
| abind::abind |
| Combine multi-dimensional arrays |
| abind::acorn |
| Return a corner of an array object (like head) |
| abind::adrop |
| Drop dimensions of an array object |
| abind::afill |
| Fill an array with subarrays |
| abind::asub |
| Arbitrary subsetting of array-like objects at specified indices |
| beeswarm::beeswarm |
| Bee swarm plot |
| beeswarm::breast |
| Lymph-node-negative primary breast tumors |
| beeswarm::bxplot |
| Plot quantile lines |
| beeswarm::swarmx |
| Adjust 1-d data to separate coincident points |
| bit::CoercionToStandard |
| Coercion from bit, bitwhich, which and ri to logical, integer, double |
| bit::Extract |
| Extract or replace part of an boolean vector |
| bit::Metadata |
| Generics related to cache access |
| bit::physical.default |
| Physical and virtual attributes |
| bit::Sorting |
| Generics for in-RAM sorting and ordering |
| bit::Summaries |
| Summaries of boolean vectors |
| bit::as.bit.NULL |
| Coercing to bit |
| bit::as.bitwhich.NULL |
| Coercing to bitwhich |
| bit::as.ri.ri |
| Coerce to ri |
| bit::as.which.which |
| Coercion to (positive) integer positions |
| bit::bbatch |
| Balanced Batch sizes |
| bit::bit |
| Create empty bit vector |
| bit::.BITS |
| Initializing bit masks |
| bit::booltypes |
| Boolean types |
| bit::c.booltype |
| Concatenating booltype vectors |
| bit::chunk |
| Methods for chunked range index |
| bit::chunks |
| Function for chunked range index |
| bit::clone |
| Cloning ff and ram objects |
| bit::getsetattr |
| Attribute setting by reference |
| bit::intrle |
| Hybrid Index, C-coded utilities |
| bit::length.bit |
| Getting and setting length of bit, bitwhich and ri objects |
| bit::rep.booltype |
| Replicating bit and bitwhich vectors |
| bit::repeat.time |
| Adaptive timer |
| bit::repfromto |
| Virtual recycling |
| bit::rev.booltype |
| Reversing bit and bitwhich vectors |
| bit::ri |
| Range index |
| bit::rlepack |
| Hybrid Index, rle-pack utilities |
| bit::unattr |
| Attribute removal |
| bit::vecseq |
| Vectorized Sequences |
| bit::xor.default |
| Boolean operators and functions |
| bit64::as.character.integer64 |
| Coerce from integer64 |
| bit64::as.data.frame.integer64 |
| integer64: Coercing to data.frame column |
| bit64::as.integer64 |
| Coerce to integer64 |
| bit64::benchmark64.data |
| Results of performance measurement on a Core i7 Lenovo T410 8 GB RAM under Windows 7 64bit |
| bit64::benchmark64 |
| Function for measuring algorithmic performance of high-level and low-level integer64 functions |
| bit64::bit64-package |
| A S3 class for vectors of 64bit integers |
| bit64::bit64S3 |
| Turning base R functions into S3 generics for bit64 |
| bit64::c.integer64 |
| Concatenating integer64 vectors |
| bit64::cache |
| Atomic Caching |
| bit64::cummin.integer64 |
| Cumulative Sums, Products, Extremes and lagged differences |
| bit64::duplicated.integer64 |
| Determine Duplicate Elements of integer64 |
| bit64::[.integer64 |
| Extract or Replace Parts of an integer64 vector |
| bit64::format.integer64 |
| Unary operators and functions for integer64 vectors |
| bit64::hashcache |
| Big caching of hashing, sorting, ordering |
| bit64::hashfun |
| Hashing for 64bit integers |
| bit64::identical.integer64 |
| Identity function for class 'integer64' |
| bit64::is.sorted.integer64 |
| Small cache access methods |
| bit64::keypos |
| Extract Positions in redundant dimension table |
| bit64::match.integer64 |
| 64-bit integer matching |
| bit64::optimizer64.data |
| Results of performance measurement on a Core i7 Lenovo T410 8 GB RAM under Windows 7 64bit |
| bit64::plusclass |
| integer64: Maintaining S3 class attribute |
| bit64::prank |
| (P)ercent (Rank)s |
| bit64::qtile |
| (Q)uan(Tile)s |
| bit64::ramsort.integer64 |
| Low-level intger64 methods for in-RAM sorting and ordering |
| bit64::rank.integer64 |
| Sample Ranks from integer64 |
| bit64::rep.integer64 |
| Replicate elements of integer64 vectors |
| bit64::runif64 |
| integer64: random numbers |
| bit64::seq.integer64 |
| integer64: Sequence Generation |
| bit64::sort.integer64 |
| High-level intger64 methods for sorting and ordering |
| bit64::sortnut |
| Searching and other uses of sorting for 64bit integers |
| bit64::all.integer64 |
| Summary functions for integer64 vectors |
| bit64::table.integer64 |
| Cross Tabulation and Table Creation for integer64 |
| bit64::tiepos |
| Extract Positions of Tied Elements |
| bit64::unipos |
| Extract Positions of Unique Elements |
| bit64::unique.integer64 |
| Extract Unique Elements from integer64 |
| bit64::&.integer64 |
| Binary operators for integer64 vectors |
| broom::augment.Mclust |
| Augment data with information from a(n) Mclust object |
| broom::augment.betamfx |
| Augment data with information from a(n) betamfx object |
| broom::augment.clm |
| Augment data with information from a(n) clm object |
| broom::augment.coxph |
| Augment data with information from a(n) coxph object |
| broom::augment.decomposed.ts |
| Augment data with information from a(n) decomposed.ts object |
| broom::augment.drc |
| Augment data with information from a(n) drc object |
| broom::augment.factanal |
| Augment data with information from a(n) factanal object |
| broom::augment.felm |
| Augment data with information from a(n) felm object |
| broom::augment.fixest |
| Augment data with information from a(n) fixest object |
| broom::augment.glm |
| Augment data with information from a(n) glm object |
| broom::augment.htest |
| Augment data with information from a(n) htest object |
| broom::augment.ivreg |
| Augment data with information from a(n) ivreg object |
| broom::augment.kmeans |
| Augment data with information from a(n) kmeans object |
| broom::augment.lm |
| Augment data with information from a(n) lm object |
| broom::augment.lmRob |
| Augment data with information from a(n) lmRob object |
| broom::augment.mfx |
| Augment data with information from a(n) mfx object |
| broom::augment.mlogit |
| Augment data with information from a(n) mlogit object |
| broom::augment.nlrq |
| Tidy a(n) nlrq object |
| broom::augment.nls |
| Augment data with information from a(n) nls object |
| broom::augment.pam |
| Augment data with information from a(n) pam object |
| broom::augment.plm |
| Augment data with information from a(n) plm object |
| broom::augment.poLCA |
| Augment data with information from a(n) poLCA object |
| broom::augment.polr |
| Augment data with information from a(n) polr object |
| broom::augment.prcomp |
| Augment data with information from a(n) prcomp object |
| broom::augment.rlm |
| Augment data with information from a(n) rlm object |
| broom::augment.glmrob |
| Augment data with information from a(n) glmrob object |
| broom::augment.lmrob |
| Augment data with information from a(n) lmrob object |
| broom::augment.rq |
| Augment data with information from a(n) rq object |
| broom::augment.rqs |
| Augment data with information from a(n) rqs object |
| broom::augment.sarlm |
| Augment data with information from a(n) spatialreg object |
| broom::augment.smooth.spline |
| Tidy a(n) smooth.spline object |
| broom::augment.speedlm |
| Augment data with information from a(n) speedlm object |
| broom::augment.stl |
| Augment data with information from a(n) stl object |
| broom::augment.survreg |
| Augment data with information from a(n) survreg object |
| broom::bootstrap |
| Set up bootstrap replicates of a dplyr operation |
| broom::confint_tidy |
| (Deprecated) Calculate confidence interval as a tidy data frame |
| broom::data.frame_tidiers |
| Tidiers for data.frame objects |
| broom::durbinWatsonTest_tidiers |
| Tidy/glance a(n) durbinWatsonTest object |
| broom::finish_glance |
| (Deprecated) Add logLik, AIC, BIC, and other common measurements to a glance of a prediction |
| broom::fix_data_frame |
| Ensure an object is a data frame, with rownames moved into a column |
| broom::glance.Arima |
| Glance at a(n) Arima object |
| broom::glance.aareg |
| Glance at a(n) aareg object |
| broom::glance.aov |
| Glance at a(n) lm object |
| broom::glance.betamfx |
| Glance at a(n) betamfx object |
| broom::glance.biglm |
| Glance at a(n) biglm object |
| broom::glance.binDesign |
| Glance at a(n) binDesign object |
| broom::glance.cch |
| Glance at a(n) cch object |
| broom::glance.clm |
| Glance at a(n) clm object |
| broom::glance.clmm |
| Glance at a(n) clmm object |
| broom::glance.coeftest |
| Glance at a(n) coeftest object |
| broom::glance.coxph |
| Glance at a(n) coxph object |
| broom::glance.crr |
| Glance at a(n) crr object |
| broom::glance.cv.glmnet |
| Glance at a(n) cv.glmnet object |
| broom::glance.drc |
| Glance at a(n) drc object |
| broom::glance.ergm |
| Glance at a(n) ergm object |
| broom::glance.factanal |
| Glance at a(n) factanal object |
| broom::glance.fitdistr |
| Glance at a(n) fitdistr object |
| broom::glance.gam |
| Glance at a(n) gam object |
| broom::glance.garch |
| Tidy a(n) garch object |
| broom::glance.geeglm |
| Glance at a(n) geeglm object |
| broom::glance.glm |
| Glance at a(n) glm object |
| broom::glance.glmRob |
| Glance at a(n) glmRob object |
| broom::glance.glmnet |
| Glance at a(n) glmnet object |
| broom::glance.gmm |
| Glance at a(n) gmm object |
| broom::glance.ivreg |
| Glance at a(n) ivreg object |
| broom::glance.kmeans |
| Glance at a(n) kmeans object |
| broom::glance.lavaan |
| Glance at a(n) lavaan object |
| broom::glance.lm |
| Glance at a(n) lm object |
| broom::glance.lmRob |
| Glance at a(n) lmRob object |
| broom::glance.lmodel2 |
| Glance at a(n) lmodel2 object |
| broom::glance.mfx |
| Glance at a(n) mfx object |
| broom::glance.mjoint |
| Glance at a(n) mjoint object |
| broom::glance.mlogit |
| Glance at a(n) mlogit object |
| broom::glance.muhaz |
| Glance at a(n) muhaz object |
| broom::glance.multinom |
| Glance at a(n) multinom object |
| broom::glance.negbin |
| Glance at a(n) negbin object |
| broom::glance.nlrq |
| Glance at a(n) nlrq object |
| broom::glance.nls |
| Glance at a(n) nls object |
| broom::glance.orcutt |
| Glance at a(n) orcutt object |
| broom::glance.pam |
| Glance at a(n) pam object |
| broom::glance.plm |
| Glance at a(n) plm object |
| broom::glance.poLCA |
| Glance at a(n) poLCA object |
| broom::glance.polr |
| Glance at a(n) polr object |
| broom::glance.pyears |
| Glance at a(n) pyears object |
| broom::glance.ridgelm |
| Glance at a(n) ridgelm object |
| broom::glance.rlm |
| Glance at a(n) rlm object |
| broom::glance.lmrob |
| Glance at a(n) lmrob object |
| broom::glance.rq |
| Glance at a(n) rq object |
| broom::glance.sarlm |
| Glance at a(n) spatialreg object |
| broom::glance.smooth.spline |
| Tidy a(n) smooth.spine object |
| broom::glance.speedglm |
| Glance at a(n) speedglm object |
| broom::glance.speedlm |
| Glance at a(n) speedlm object |
| broom::glance.summary.lm |
| Glance at a(n) summary.lm object |
| broom::glance.survdiff |
| Glance at a(n) survdiff object |
| broom::glance.survexp |
| Glance at a(n) survexp object |
| broom::glance.survfit |
| Glance at a(n) survfit object |
| broom::glance.survreg |
| Glance at a(n) survreg object |
| broom::glance.svyglm |
| Glance at a(n) svyglm object |
| broom::glance.svyolr |
| Glance at a(n) svyolr object |
| broom::glance.Gam |
| Glance at a(n) Gam object |
| broom::glance_optim |
| Tidy a(n) optim object masquerading as list |
| broom::leveneTest_tidiers |
| Tidy/glance a(n) leveneTest object |
| broom::list_tidiers |
| Tidying methods for lists / returned values that are not S3 objects |
| broom::summary_tidiers |
| (Deprecated) Tidy summaryDefault objects |
| broom::tidy.Arima |
| Tidy a(n) Arima object |
| broom::tidy.Mclust |
| Tidy a(n) Mclust object |
| broom::tidy.TukeyHSD |
| Tidy a(n) TukeyHSD object |
| broom::tidy.aareg |
| Tidy a(n) aareg object |
| broom::tidy.acf |
| Tidy a(n) acf object |
| broom::tidy.anova |
| Tidy a(n) anova object |
| broom::tidy.aov |
| Tidy a(n) aov object |
| broom::tidy.aovlist |
| Tidy a(n) aovlist object |
| broom::tidy.betamfx |
| Tidy a(n) betamfx object |
| broom::tidy.betareg |
| Tidy a(n) betareg object |
| broom::tidy.biglm |
| Tidy a(n) biglm object |
| broom::tidy.binDesign |
| Tidy a(n) binDesign object |
| broom::tidy.binWidth |
| Tidy a(n) binWidth object |
| broom::tidy.cch |
| Tidy a(n) cch object |
| broom::tidy.cld |
| Tidy a(n) cld object |
| broom::tidy.clm |
| Tidy a(n) clm object |
| broom::tidy.clmm |
| Tidy a(n) clmm object |
| broom::tidy.coeftest |
| Tidy a(n) coeftest object |
| broom::tidy.confint.glht |
| Tidy a(n) confint.glht object |
| broom::tidy.coxph |
| Tidy a(n) coxph object |
| broom::tidy.crr |
| Tidy a(n) cmprsk object |
| broom::tidy.cv.glmnet |
| Tidy a(n) cv.glmnet object |
| broom::tidy.density |
| (Deprecated) Tidy density objects |
| broom::tidy.dist |
| (Deprecated) Tidy dist objects |
| broom::tidy.drc |
| Tidy a(n) drc object |
| broom::tidy.emmGrid |
| Tidy a(n) emmGrid object |
| broom::tidy.epi.2by2 |
| Tidy a(n) epi.2by2 object |
| broom::tidy.ergm |
| Tidy a(n) ergm object |
| broom::tidy.factanal |
| Tidy a(n) factanal object |
| broom::tidy.felm |
| Tidy a(n) felm object |
| broom::tidy.fitdistr |
| Tidy a(n) fitdistr object |
| broom::tidy.fixest |
| Tidy a(n) fixest object |
| broom::tidy.ftable |
| (Deprecated) Tidy ftable objects |
| broom::tidy.gam |
| Tidy a(n) gam object |
| broom::tidy.garch |
| Tidy a(n) garch object |
| broom::tidy.glht |
| Tidy a(n) glht object |
| broom::tidy.glm |
| Tidy a(n) glm object |
| broom::tidy.glmRob |
| Tidy a(n) glmRob object |
| broom::tidy.glmnet |
| Tidy a(n) glmnet object |
| broom::tidy.gmm |
| Tidy a(n) gmm object |
| broom::tidy.htest |
| Tidy/glance a(n) htest object |
| broom::tidy.ivreg |
| Tidy a(n) ivreg object |
| broom::tidy.kmeans |
| Tidy a(n) kmeans object |
| broom::tidy.lavaan |
| Tidy a(n) lavaan object |
| broom::tidy.lm |
| Tidy a(n) lm object |
| broom::tidy.lm.beta |
| Tidy a(n) lm.beta object |
| broom::tidy.lmRob |
| Tidy a(n) lmRob object |
| broom::tidy.lmodel2 |
| Tidy a(n) lmodel2 object |
| broom::tidy.lsmobj |
| Tidy a(n) lsmobj object |
| broom::tidy.manova |
| Tidy a(n) manova object |
| broom::tidy.margins |
| Tidy a(n) margins object |
| broom::tidy.mediate |
| Tidy a(n) mediate object |
| broom::tidy.mfx |
| Tidy a(n) mfx object |
| broom::tidy.mjoint |
| Tidy a(n) mjoint object |
| broom::tidy.mlm |
| Tidy a(n) mlm object |
| broom::tidy.mlogit |
| Tidying methods for logit models |
| broom::tidy.muhaz |
| Tidy a(n) muhaz object |
| broom::tidy.multinom |
| Tidying methods for multinomial logistic regression models |
| broom::tidy.negbin |
| Tidy a(n) negbin object |
| broom::tidy.nlrq |
| Tidy a(n) nlrq object |
| broom::tidy.nls |
| Tidy a(n) nls object |
| broom::tidy.orcutt |
| Tidy a(n) orcutt object |
| broom::tidy.pairwise.htest |
| Tidy a(n) pairwise.htest object |
| broom::tidy.pam |
| Tidy a(n) pam object |
| broom::tidy.plm |
| Tidy a(n) plm object |
| broom::tidy.poLCA |
| Tidy a(n) poLCA object |
| broom::tidy.polr |
| Tidy a(n) polr object |
| broom::tidy.power.htest |
| Tidy a(n) power.htest object |
| broom::tidy.prcomp |
| Tidy a(n) prcomp object |
| broom::tidy.pyears |
| Tidy a(n) pyears object |
| broom::tidy.ref.grid |
| Tidy a(n) ref.grid object |
| broom::tidy.ridgelm |
| Tidy a(n) ridgelm object |
| broom::tidy.rlm |
| Tidy a(n) rlm object |
| broom::tidy.glmrob |
| Tidy a(n) glmrob object |
| broom::tidy.lmrob |
| Tidy a(n) lmrob object |
| broom::tidy.rq |
| Tidy a(n) rq object |
| broom::tidy.rqs |
| Tidy a(n) rqs object |
| broom::tidy.sarlm |
| Tidying methods for spatially autoregressive models |
| broom::tidy.spec |
| Tidy a(n) spec object |
| broom::tidy.speedglm |
| Tidy a(n) speedglm object |
| broom::tidy.speedlm |
| Tidy a(n) speedlm object |
| broom::tidy.summary.glht |
| Tidy a(n) summary.glht object |
| broom::tidy.summary.lm |
| Tidy a(n) summary.lm object |
| broom::tidy.summary_emm |
| Tidy a(n) summary_emm object |
| broom::tidy.survdiff |
| Tidy a(n) survdiff object |
| broom::tidy.survexp |
| Tidy a(n) survexp object |
| broom::tidy.survfit |
| Tidy a(n) survfit object |
| broom::tidy.survreg |
| Tidy a(n) survreg object |
| broom::tidy.svyglm |
| Tidy a(n) svyglm object |
| broom::tidy.svyolr |
| Tidy a(n) svyolr object |
| broom::tidy.systemfit |
| Tidy a(n) systemfit object |
| broom::tidy.ts |
| Tidy a(n) ts object |
| broom::tidy.varest |
| Tidy a(n) varest object |
| broom::tidy.zoo |
| Tidy a(n) zoo object |
| broom::tidy.Gam |
| Tidy a(n) Gam object |
| broom::tidy_irlba |
| Tidy a(n) irlba object masquerading as list |
| broom::tidy_optim |
| Tidy a(n) optim object masquerading as list |
| broom::tidy_svd |
| Tidy a(n) svd object masquerading as list |
| broom::tidy_xyz |
| Tidy a(n) xyz object masquerading as list |
| broom::tidy.numeric |
| Tidy atomic vectors |
| callr::r |
| Evaluate an expression in another R session |
| callr::r_copycat |
| Run an R process that mimics the current R process |
| callr::r_vanilla |
| Run an R child process, with no configuration |
| callr::rcmd |
| Run an R CMD command |
| callr::rcmd_bg |
| Run an R CMD command in the background |
| callr::rcmd_copycat |
| Call and R CMD command, while mimicking the current R session |
| car::Anova |
| Anova Tables for Various Statistical Models |
| car::Boot |
| Bootstrapping for regression models |
| car::Boxplot |
| Boxplots With Point Identification |
| car::Contrasts |
| Functions to Construct Contrasts |
| car::ellipse |
| Ellipses, Data Ellipses, and Confidence Ellipses |
| car::Export |
| Export a data frame to disk in one of many formats |
| car::Import |
| Import data from many file formats |
| car::Predict |
| Model Predictions |
| car::S |
| Modified Functions for Summarizing Linear, Generalized Linear, and Some Other Models |
| car::ScatterplotSmoothers |
| Smoothers to Draw Lines on Scatterplots |
| car::Tapply |
| Apply a Function to a Variable Within Factor Levels |
| car::basicPowerAxis |
| Axes for Transformed Variables |
| car::avPlots |
| Added-Variable Plots |
| car::bcPower |
| Box-Cox, Box-Cox with Negatives Allowed, Yeo-Johnson and Basic Power Transformations |
| car::boxCox |
| Graph the profile log-likelihood for Box-Cox transformations in 1D, or in 2D with the bcnPower family. |
| car::boxCoxVariable |
| Constructed Variable for Box-Cox Transformation |
| car::boxTidwell |
| Box-Tidwell Transformations |
| car::brief |
| Print Abbreviated Ouput |
| car::car-deprecated |
| Deprecated Functions in the car Package |
| car::car-internal.Rd |
| Internal Objects for the 'car' package |
| car::carHexsticker |
| View the Official Hex Sticker for the car Package |
| car::carPalette |
| Set or Retrieve 'car' Package Color Palette |
| car::carWeb |
| Access to the R Companion to Applied Regression Website |
| car::ceresPlots |
| Ceres Plots |
| car::compareCoefs |
| Print estimated coefficients and their standard errors in a table for several regression models. |
| car::crPlots.default |
| Component+Residual (Partial Residual) Plots |
| car::deltaMethod |
| Estimate and Standard Error of a Nonlinear Function of Estimated Regression Coefficients |
| car::densityPlot |
| Nonparametric Density Estimates |
| car::dfbetaPlots |
| dfbeta and dfbetas Index Plots |
| car::durbinWatsonTest |
| Durbin-Watson Test for Autocorrelated Errors |
| car::hccm |
| Heteroscedasticity-Corrected Covariance Matrices |
| car::hist.boot |
| Methods Functions to Support 'boot' Objects |
| car::infIndexPlot |
| Influence Index Plot |
| car::influence.mixed.models |
| Influence Diagnostics for Mixed-Effects Models |
| car::influencePlot |
| Regression Influence Plot |
| car::invResPlot |
| Inverse Response Plots to Transform the Response |
| car::invTranPlot |
| Choose a Predictor Transformation Visually or Numerically |
| car::leveneTest |
| Levene's Test |
| car::leveragePlots |
| Regression Leverage Plots |
| car::linearHypothesis |
| Test Linear Hypothesis |
| car::logit |
| Logit Transformation |
| car::mmps |
| Marginal Model Plotting |
| car::mcPlots |
| Draw Linear Model Marginal and Conditional Plots in Parallel or Overlaid |
| car::ncvTest |
| Score Test for Non-Constant Error Variance |
| car::outlierTest |
| Bonferroni Outlier Test |
| car::panel.car |
| Panel Function for Coplots |
| car::poTest |
| Test for Proportional Odds in the Proportional-Odds Logistic-Regression Model |
| car::powerTransform |
| Finding Univariate or Multivariate Power Transformations |
| car::qqPlot |
| Quantile-Comparison Plot |
| car::recode |
| Recode a Variable |
| car::regLine |
| Plot Regression Line |
| car::residualPlots |
| Residual Plots for Linear and Generalized Linear Models |
| car::scatter3d |
| Three-Dimensional Scatterplots and Point Identification |
| car::scatterplot |
| Enhanced Scatterplots with Marginal Boxplots, Point Marking, Smoothers, and More |
| car::scatterplotMatrix |
| Scatterplot Matrices |
| car::showLabels |
| Functions to Identify and Mark Extreme Points in a 2D Plot. |
| car::sigmaHat |
| Return the scale estimate for a regression model |
| car::some |
| Sample a Few Elements of an Object |
| car::spreadLevelPlot |
| Spread-Level Plots |
| car::strings2factors |
| Convert Character-String Variables in a Data Frame to Factors |
| car::subsets |
| Plot Output from regsubsets Function in leaps package |
| car::symbox |
| Boxplots for transformations to symmetry |
| car::testTransform |
| Likelihood-Ratio Tests for Univariate or Multivariate Power Transformations to Normality |
| car::vif |
| Variance Inflation Factors |
| car::wcrossprod |
| Weighted Matrix Crossproduct |
| car::which.names |
| Position of Row Names |
| carData::AMSsurvey |
| American Math Society Survey Data |
| carData::Adler |
| Experimenter Expectations |
| carData::Angell |
| Moral Integration of American Cities |
| carData::Anscombe |
| U. S. State Public-School Expenditures |
| carData::Arrests |
| Arrests for Marijuana Possession |
| carData::BEPS |
| British Election Panel Study |
| carData::Baumann |
| Methods of Teaching Reading Comprehension |
| carData::Bfox |
| Canadian Women's Labour-Force Participation |
| carData::Blackmore |
| Exercise Histories of Eating-Disordered and Control Subjects |
| carData::Burt |
| Fraudulent Data on IQs of Twins Raised Apart |
| carData::CES11 |
| 2011 Canadian National Election Study, With Attitude Toward Abortion |
| carData::CanPop |
| Canadian Population Data |
| carData::Chile |
| Voting Intentions in the 1988 Chilean Plebiscite |
| carData::Chirot |
| The 1907 Romanian Peasant Rebellion |
| carData::Cowles |
| Cowles and Davis's Data on Volunteering |
| carData::Davis |
| Self-Reports of Height and Weight |
| carData::DavisThin |
| Davis's Data on Drive for Thinness |
| carData::Depredations |
| Minnesota Wolf Depredation Data |
| carData::Duncan |
| Duncan's Occupational Prestige Data |
| carData::Ericksen |
| The 1980 U.S. Census Undercount |
| carData::Florida |
| Florida County Voting |
| carData::Freedman |
| Crowding and Crime in U. S. Metropolitan Areas |
| carData::Friendly |
| Format Effects on Recall |
| carData::GSSvocab |
| Data from the General Social Survey (GSS) from the National Opinion Research Center of the University of Chicago. |
| carData::Ginzberg |
| Data on Depression |
| carData::Greene |
| Refugee Appeals |
| carData::Guyer |
| Anonymity and Cooperation |
| carData::Hartnagel |
| Canadian Crime-Rates Time Series |
| carData::Highway1 |
| Highway Accidents |
| carData::KosteckiDillon |
| Treatment of Migraine Headaches |
| carData::Leinhardt |
| Data on Infant-Mortality |
| carData::LoBD |
| Cancer drug data use to provide an example of the use of the skew power distributions. |
| carData::Mandel |
| Contrived Collinear Data |
| carData::Migration |
| Canadian Interprovincial Migration Data |
| carData::Moore |
| Status, Authoritarianism, and Conformity |
| carData::MplsStops |
| Minneapolis Police Department 2017 Stop Data |
| carData::MplsDemo |
| Minneapolis Demographic Data 2015, by Neighborhood |
| carData::Mroz |
| U.S. Women's Labor-Force Participation |
| carData::OBrienKaiser |
| O'Brien and Kaiser's Repeated-Measures Data |
| carData::OBrienKaiserLong |
| O'Brien and Kaiser's Repeated-Measures Data in "Long" Format |
| carData::Ornstein |
| Interlocking Directorates Among Major Canadian Firms |
| carData::Pottery |
| Chemical Composition of Pottery |
| carData::Prestige |
| Prestige of Canadian Occupations |
| carData::Quartet |
| Four Regression Datasets |
| carData::Robey |
| Fertility and Contraception |
| carData::Rossi |
| Rossi et al.'s Criminal Recidivism Data |
| carData::SLID |
| Survey of Labour and Income Dynamics |
| carData::Sahlins |
| Agricultural Production in Mazulu Village |
| carData::Salaries |
| Salaries for Professors |
| carData::Soils |
| Soil Compositions of Physical and Chemical Characteristics |
| carData::States |
| Education and Related Statistics for the U.S. States |
| carData::TitanicSurvival |
| Survival of Passengers on the Titanic |
| carData::Transact |
| Transaction data |
| carData::UN |
| National Statistics from the United Nations, Mostly From 2009-2011 |
| carData::UN98 |
| United Nations Social Indicators Data 1998] |
| carData::USPop |
| Population of the United States |
| carData::Vocab |
| Vocabulary and Education |
| carData::WVS |
| World Values Surveys |
| carData::WeightLoss |
| Weight Loss Data |
| carData::Wells |
| Well Switching in Bangladesh |
| carData::Womenlf |
| Canadian Women's Labour-Force Participation |
| carData::Wong |
| Post-Coma Recovery of IQ |
| carData::Wool |
| Wool data |
| checkmate::checkAccess |
| Check file system access rights |
| checkmate::checkArray |
| Check if an argument is an array |
| checkmate::checkAtomic |
| Check that an argument is an atomic vector |
| checkmate::checkAtomicVector |
| Check that an argument is an atomic vector |
| checkmate::checkCharacter |
| Check if an argument is a vector of type character |
| checkmate::checkChoice |
| Check if an object is an element of a given set |
| checkmate::checkClass |
| Check the class membership of an argument |
| checkmate::checkComplex |
| Check if an argument is a vector of type complex |
| checkmate::checkCount |
| Check if an argument is a count |
| checkmate::checkDataFrame |
| Check if an argument is a data frame |
| checkmate::checkDataTable |
| Check if an argument is a data table |
| checkmate::checkDate |
| Check that an argument is a Date |
| checkmate::checkDirectoryExists |
| Check for existence and access rights of directories |
| checkmate::checkDisjunct |
| Check if an argument is disjunct from a given set |
| checkmate::checkDouble |
| Check that an argument is a vector of type double |
| checkmate::checkEnvironment |
| Check if an argument is an environment |
| checkmate::checkFactor |
| Check if an argument is a factor |
| checkmate::checkFileExists |
| Check existence and access rights of files |
| checkmate::checkFlag |
| Check if an argument is a flag |
| checkmate::checkFormula |
| Check if an argument is a formula |
| checkmate::checkFunction |
| Check if an argument is a function |
| checkmate::checkInt |
| Check if an argument is a single integerish value |
| checkmate::checkInteger |
| Check if an argument is vector of type integer |
| checkmate::checkIntegerish |
| Check if an object is an integerish vector |
| checkmate::checkList |
| Check if an argument is a list |
| checkmate::checkLogical |
| Check if an argument is a vector of type logical |
| checkmate::checkMatrix |
| Check if an argument is a matrix |
| checkmate::checkMultiClass |
| Check the class membership of an argument |
| checkmate::checkNamed |
| Check if an argument is named |
| checkmate::checkNames |
| Check names to comply to specific rules |
| checkmate::checkNull |
| Check if an argument is NULL |
| checkmate::checkNumber |
| Check if an argument is a single numeric value |
| checkmate::checkNumeric |
| Check that an argument is a vector of type numeric |
| checkmate::checkPOSIXct |
| Check that an argument is a date/time object in POSIXct format |
| checkmate::checkPathForOutput |
| Check if a path is suited for creating an output file |
| checkmate::checkPermutation |
| Check if the arguments are permutations of each other. |
| checkmate::checkR6 |
| Check if an argument is an R6 class |
| checkmate::checkRaw |
| Check if an argument is a raw vector |
| checkmate::checkScalar |
| Check if an argument is a single atomic value |
| checkmate::checkScalarNA |
| Check if an argument is a single missing value |
| checkmate::checkSetEqual |
| Check if an argument is equal to a given set |
| checkmate::checkString |
| Check if an argument is a string |
| checkmate::checkSubset |
| Check if an argument is a subset of a given set |
| checkmate::checkTibble |
| Check if an argument is a tibble |
| checkmate::checkVector |
| Check if an argument is a vector |
| checkmate::makeAssertion |
| Turn a Check into an Assertion |
| checkmate::makeExpectation |
| Turn a Check into an Expectation |
| checkmate::makeTest |
| Turn a Check into a Test |
| chron::year.expand |
| Internal chron objects |
| chron::chron |
| Create a Chronological Object |
| chron::cut.dates |
| Create a Factor from a Chron or Dates Object |
| chron::dates |
| Generate Dates and Times Components from Input |
| chron::day.of.week |
| Convert between Julian and Calendar Dates |
| chron::days |
| Return Various Periods from a Chron or Dates Object |
| chron::format.chron |
| Format a chron object |
| chron::hours |
| Return Hours, Minutes, or Seconds from a Times Object |
| chron::is.holiday |
| Find Weekends and Holidays in a Chron or Dates Object |
| chron::origin |
| Chron Origin |
| chron::seq.dates |
| Generate Chron or Dates Sequences |
| chron::round.times |
| Truncate times Objects |
| chron::as.chron.yearmon |
| Convert monthly or quarterly data to chron |
| classInt::classIntervals |
| Choose univariate class intervals |
| classInt::findColours |
| assign colours to classes from classInterval object |
| classInt::findCols |
| extract classes from classInterval object |
| classInt::getBclustClassIntervals |
| Change breaks in a "classIntervals" object |
| classInt::jenks.tests |
| Indices for assessing class intervals |
| colorspace::HLS |
| Create HLS Colors |
| colorspace::HSV |
| Create HSV Colors |
| colorspace::LAB |
| Create LAB Colors |
| colorspace::LUV |
| Create LUV Colors |
| colorspace::RGB |
| Create RGB Colors |
| colorspace::USSouthPolygon |
| Polygon for County Map of US South States: Alabama, Georgia, and South Carolina |
| colorspace::XYZ |
| Create XYZ Colors |
| colorspace::adjust_transparency |
| Adjust or Extract Transparency of Colors |
| colorspace::choose_palette |
| Graphical User Interface for Choosing HCL Color Palettes |
| colorspace::color-class |
| Class "color" |
| colorspace::contrast_ratio |
| W3C Contrast Ratio |
| colorspace::coords |
| Extract the Numerical Coordinates of a Color |
| colorspace::cvd |
| Color Vision Deficiency (CVD) Conversion Tables |
| colorspace::demoplot |
| Color Palette Demonstration Plot |
| colorspace::desaturate |
| Desaturate Colors by Chroma Removal in HCL Space |
| colorspace::divergingx_hcl |
| (More) Flexible Diverging HCL Palettes |
| colorspace::hcl_color_picker |
| Graphical User Interface to Pick Colors in HCL Space |
| colorspace::hcl_palettes |
| HCL Color Palettes |
| colorspace::hclplot |
| Palette Plot in HCL Space |
| colorspace::hex |
| Convert Colors to Hexadecimal Strings |
| colorspace::hex2RGB |
| Convert Hexadecimal Color Specifications to sRGB Objects |
| colorspace::lighten |
| Algorithmically Lighten or Darken Colors |
| colorspace::max_chroma |
| Compute Maximum Chroma for Given Hue and Luminance in HCL |
| colorspace::mixcolor |
| Compute the Convex Combination of Two Colors |
| colorspace::polarLAB |
| Create polarLAB Colors |
| colorspace::polarLUV |
| Create polarLUV (HCL) Colors |
| colorspace::rainbow_hcl |
| HCL (and HSV) Color Palettes Corresponding to Base R Palettes |
| colorspace::readRGB |
| Read RGB Color Descriptions |
| colorspace::readhex |
| Read Hexadecimal Color Descriptions |
| colorspace::sRGB |
| Create sRGB Colors |
| colorspace::simulate_cvd |
| Simulate Color Vision Deficiency |
| colorspace::specplot |
| Color Spectrum Plot |
| colorspace::swatchplot |
| Palette Swatch Plot |
| colorspace::whitepoint |
| Access or Modify the Whitepoint |
| colorspace::writehex |
| Write Hexadecimal Color Descriptions |
| countrycode::cldr_examples |
| List of CLDR country name codes and associated examples |
| countrycode::codelist |
| Country Code Translation Data Frame (Cross-Sectional) |
| countrycode::codelist_panel |
| Country Code Translation Data Frame (Country-Year Panel) |
| countrycode::countrycode-package |
| Convert Country Codes or Country Names |
| countrycode::countrycode |
| Convert Country Codes |
| countrycode::countryname_dict |
| A dataframe of alternative country names in many languages. Used internally by the 'countryname' function. |
| crayon::col_align |
| Align an ANSI colored string |
| crayon::col_nchar |
| Count number of characters in an ANSI colored string |
| crayon::col_strsplit |
| Split an ANSI colored string |
| crayon::col_substr |
| Substring(s) of an ANSI colored string |
| crayon::col_substring |
| Substring(s) of an ANSI colored string |
| crayon::drop_style |
| Remove a style |
| crayon::make_style |
| Create an ANSI color style |
| crayon::num_ansi_colors |
| Detect the number of ANSI colors to use |
| crul::Async |
| Simple async client |
| crul::AsyncQueue |
| AsyncQueue |
| crul::AsyncVaried |
| Async client for different request types |
| crul::HttpRequest |
| HTTP request object |
| crul::verb-DELETE |
| HTTP verb info: DELETE |
| crul::verb-GET |
| HTTP verb info: GET |
| crul::verb-HEAD |
| HTTP verb info: HEAD |
| crul::verb-PATCH |
| HTTP verb info: PATCH |
| crul::verb-POST |
| HTTP verb info: POST |
| crul::verb-PUT |
| HTTP verb info: PUT |
| data.table::IDate |
| Integer based date class |
| data.table::J |
| Creates a join 'data.table' |
| data.table::address |
| Address in RAM of a variable |
| data.table::as.data.table |
| Coerce to data.table |
| data.table::as.matrix |
| Convert a data.table to a matrix |
| data.table:::= |
| Assignment by reference |
| data.table::between |
| Convenience functions for range subsets. |
| data.table::cdatatable |
| data.table exported C routines |
| data.table::chmatch |
| Faster match of character vectors |
| data.table::fcoalesce |
| Coalescing missing values |
| data.table::copy |
| Copy an entire object |
| data.table::class:data.table |
| S4 Definition for data.table |
| data.table::data.table-package |
| Enhanced data.frame |
| data.table::datatable-optimize |
| Optimisations in data.table |
| data.table::dcast.data.table |
| Fast dcast for data.table |
| data.table::duplicated |
| Determine Duplicate Rows |
| data.table::fcase |
| fcase |
| data.table::fifelse |
| Fast ifelse |
| data.table::foverlaps |
| Fast overlap joins |
| data.table::frank |
| Fast rank |
| data.table::fread |
| Fast and friendly file finagler |
| data.table::roll |
| Rolling functions |
| data.table::fwrite |
| Fast CSV writer |
| data.table::rollup |
| Grouping Set aggregation for data tables |
| data.table::first |
| First/last item of an object |
| data.table::.Last.updated |
| Number of rows affected by last update |
| data.table::like |
| Convenience function for calling grep. |
| data.table::melt.data.table |
| Fast melt for data.table |
| data.table::merge |
| Merge two data.tables |
| data.table::na.omit.data.table |
| Remove rows with missing values on columns specified |
| data.table::nafill |
| Fill missing values |
| data.table::setDTthreads |
| Set or get number of threads that data.table should use |
| data.table::patterns |
| Obtain matching indices corresponding to patterns |
| data.table::rbindlist |
| Makes one data.table from a list of many |
| data.table::rleid |
| Generate run-length type group id |
| data.table::rowid |
| Generate unique row ids within each group |
| data.table::setDF |
| Coerce a data.table to data.frame by reference |
| data.table::setDT |
| Coerce lists and data.frames to data.table by reference |
| data.table::setNumericRounding |
| Change or turn off numeric rounding |
| data.table::setattr |
| Set attributes of objects by reference |
| data.table::setcolorder |
| Fast column reordering of a data.table by reference |
| data.table::setkey |
| Create key on a data.table |
| data.table::setops |
| Set operations for data tables |
| data.table::setorder |
| Fast row reordering of a data.table by reference |
| data.table::shift |
| Fast lead/lag for vectors and lists |
| data.table::special-symbols |
| Special symbols |
| data.table::split |
| Split data.table into chunks in a list |
| data.table::subset |
| Subsetting data.tables |
| data.table::tables |
| Display 'data.table' metadata |
| data.table::test |
| Test assertions for equality, exceptions and console output |
| data.table::test.data.table |
| Runs a set of tests. |
| data.table::timetaken |
| Pretty print of time taken |
| data.table::transform |
| Data table utilities |
| data.table::transpose |
| Efficient transpose of list |
| data.table::truelength |
| Over-allocation access |
| data.table::tstrsplit |
| strsplit and transpose the resulting list efficiently |
| data.table::update |
| Perform update of development version of a package |
| DBI::DBIConnection-class |
| DBIConnection class |
| DBI::DBIConnector-class |
| DBIConnector class |
| DBI::DBIDriver-class |
| DBIDriver class |
| DBI::DBIObject-class |
| DBIObject class |
| DBI::DBIResult-class |
| DBIResult class |
| DBI::dbAppendTable |
| Insert rows into a table |
| DBI::dbBind |
| Bind values to a parameterized/prepared statement |
| DBI::dbCanConnect |
| Check if a connection to a DBMS can be established |
| DBI::dbClearResult |
| Clear a result set |
| DBI::dbColumnInfo |
| Information about result types |
| DBI::dbConnect |
| Create a connection to a DBMS |
| DBI::dbCreateTable |
| Create a table in the database |
| DBI::dbDataType |
| Determine the SQL data type of an object |
| DBI::dbDisconnect |
| Disconnect (close) a connection |
| DBI::dbDriver |
| Load and unload database drivers |
| DBI::dbExecute |
| Execute an update statement, query number of rows affected, and then close result set |
| DBI::dbExistsTable |
| Does a table exist? |
| DBI::dbFetch |
| Fetch records from a previously executed query |
| DBI::dbGetConnectArgs |
| Get connection arguments |
| DBI::dbGetException |
| Get DBMS exceptions |
| DBI::dbGetInfo |
| Get DBMS metadata |
| DBI::dbGetQuery |
| Send query, retrieve results and then clear result set |
| DBI::dbGetRowCount |
| The number of rows fetched so far |
| DBI::dbGetRowsAffected |
| The number of rows affected |
| DBI::dbGetStatement |
| Get the statement associated with a result set |
| DBI::dbHasCompleted |
| Completion status |
| DBI::dbIsReadOnly |
| Is this DBMS object read only? |
| DBI::dbIsValid |
| Is this DBMS object still valid? |
| DBI::dbListConnections |
| List currently open connections |
| DBI::dbListFields |
| List field names of a remote table |
| DBI::dbListObjects |
| List remote objects |
| DBI::dbListResults |
| A list of all pending results |
| DBI::dbListTables |
| List remote tables |
| DBI::dbQuoteIdentifier |
| Quote identifiers |
| DBI::dbQuoteLiteral |
| Quote literal values |
| DBI::dbQuoteString |
| Quote literal strings |
| DBI::dbReadTable |
| Copy data frames from database tables |
| DBI::dbRemoveTable |
| Remove a table from the database |
| DBI::dbSendQuery |
| Execute a query on a given database connection |
| DBI::dbSendStatement |
| Execute a data manipulation statement on a given database connection |
| DBI::dbUnquoteIdentifier |
| Unquote identifiers |
| DBI::dbWriteTable |
| Copy data frames to database tables |
| DBI::sqlAppendTable |
| Compose query to insert rows into a table |
| desc::cran_ascii_fields |
| The DESCRIPTION fields that are supposed to be in plain ASCII encoding |
| desc::cran_valid_fields |
| A list of DESCRIPTION fields that are valid according to the CRAN checks |
| desc::dep_types |
| DESCRIPTION fields that denote package dependencies |
| desc::desc_add_author |
| Add an author to Authors@R in DESCRIPTION |
| desc::desc_add_author_gh |
| Add a GitHub user as an author to DESCRIPTION |
| desc::desc_add_me |
| Add the current user as an author to DESCRIPTION |
| desc::desc_add_orcid |
| Add an ORCID to one or more authors in Authors@R, in DESCRIPTION |
| desc::desc_add_role |
| Add a role to one or more authors in Authors@R, in DESCRIPTION |
| desc::desc_add_to_collate |
| Add one or more files to the Collate field, in DESCRIPTION |
| desc::desc_bump_version |
| Increase the version number in DESCRIPTION |
| desc::desc_change_maintainer |
| Change maintainer of the package, in DESCRIPTION |
| desc::desc_coerce_authors_at_r |
| Coerce Author and Maintainer Fields to Authors@R |
| desc::desc_del |
| Remove fields from a DESCRIPTION file |
| desc::desc_del_author |
| Remove one or more authors from DESCRIPTION. |
| desc::desc_del_collate |
| Delete the Collate field from DESCRIPTION |
| desc::desc_del_dep |
| Remove a package dependency from DESCRIPTION |
| desc::desc_del_deps |
| Remove all dependencies from DESCRIPTION |
| desc::desc_del_from_collate |
| Remove files from the Collate field. |
| desc::desc_del_role |
| Delete a role of an author, in DESCRIPTION |
| desc::desc_fields |
| List all fields in a DESCRIPTION file |
| desc::desc_get |
| Get a field from a DESCRIPTION file |
| desc::desc_get_author |
| Query authors by role in Authors@R, in DESCRIPTION |
| desc::desc_get_authors |
| Query all authors in Authors@R, in DESCRIPTION |
| desc::desc_get_built |
| Query the built field in DESCRIPTION |
| desc::desc_get_collate |
| Query the Collate field in DESCRIPTION |
| desc::desc_get_deps |
| List all package dependencies from a DESCRIPTION file |
| desc::desc_get_field |
| Get a single field from a DESCRIPTION file, fail if not found |
| desc::desc_get_maintainer |
| Query the package maintainer in DESCRIPTION |
| desc::desc_get_version |
| Query the package version in DESCRIPTION |
| desc::desc_has_dep |
| Check for a dependency |
| desc::desc_has_fields |
| Check if some fields are present in a DESCRIPTION file |
| desc::desc_normalize |
| Normalize a DESCRIPTION file |
| desc::desc_reformat_fields |
| Reformat fields in a DESCRIPTION file |
| desc::desc_reorder_fields |
| Reorder fields in a DESCRIPTION file |
| desc::desc_set |
| Set one or more fields in a DESCRIPTION file |
| desc::desc_set_authors |
| Set authors in Authors@R, in DESCRIPTION |
| desc::desc_set_collate |
| Set the Collate field in DESCRIPTION |
| desc::desc_set_dep |
| Add a package dependency to a DESCRIPTION file |
| desc::desc_set_deps |
| Set all package dependencies in DESCRIPTION |
| desc::desc_set_version |
| Set the package version in DESCRIPTION |
| dichromat::colorschemes |
| Color Schemes |
| dichromat::dalton |
| Effects of Daltonism (Red-Green Color Blindness) |
| dichromat::dichromat |
| Remove Red-Green or Green-Blue Contrasts from Colors |
| dplyr::arrange |
| Arrange rows by column values |
| dplyr::band_members |
| Band membership |
| dplyr::filter-joins |
| Filtering joins |
| dplyr::filter |
| Subset rows using column values |
| dplyr::group_by |
| Group by one or more variables |
| dplyr::group_map |
| Apply a function to each group |
| dplyr::group_nest |
| Nest a tibble using a grouping specification |
| dplyr::group_split |
| Split data frame by groups |
| dplyr::group_trim |
| Trim grouping structure |
| dplyr::mutate-joins |
| Mutating joins |
| dplyr::mutate |
| Create, modify, and delete columns |
| dplyr::nest_join |
| Nest join |
| dplyr::rename |
| Rename columns |
| dplyr::select |
| Subset columns using their names and types |
| dplyr::slice |
| Subset rows using their positions |
| dplyr::starwars |
| Starwars characters |
| dplyr::storms |
| Storm tracks data |
| dplyr::summarise |
| Summarise each group to fewer rows |
| e1071::ddiscrete |
| Discrete Distribution |
| e1071::bclust |
| Bagged Clustering |
| e1071::bincombinations |
| Binary Combinations |
| e1071::bootstrap.lca |
| Bootstrap Samples of LCA Results |
| e1071::boxplot.bclust |
| Boxplot of Cluster Profiles |
| e1071::classAgreement |
| Coefficients Comparing Classification Agreement |
| e1071::cmeans |
| Fuzzy C-Means Clustering |
| e1071::countpattern |
| Count Binary Patterns |
| e1071::cshell |
| Fuzzy C-Shell Clustering |
| e1071::e1071-deprecated |
| Deprecated Functions in Package e1071 |
| e1071::element |
| Extract Elements of an Array |
| e1071::fclustIndex |
| Fuzzy Cluster Indexes (Validity/Performance Measures) |
| e1071::gknn |
| Generalized k-Nearest Neighbors Classification or Regression |
| e1071::hamming.distance |
| Hamming Distances of Vectors |
| e1071::hamming.window |
| Computes the Coefficients of a Hamming Window. |
| e1071::hanning.window |
| Computes the Coefficients of a Hanning Window. |
| e1071::hsv_palette |
| Sequential color palette based on HSV colors |
| e1071::ica |
| Independent Component Analysis |
| e1071::impute |
| Replace Missing Values |
| e1071::interpolate |
| Interpolate Values of Array |
| e1071::kurtosis |
| Kurtosis |
| e1071::lca |
| Latent Class Analysis (LCA) |
| e1071::matchClasses |
| Find Similar Classes in Two-way Contingency Tables |
| e1071::matchControls |
| Find Matched Control Group |
| e1071::moment |
| Statistical Moment |
| e1071::naiveBayes |
| Naive Bayes Classifier |
| e1071::permutations |
| All Permutations of Integers 1:n |
| e1071::plot.stft |
| Plot Short Time Fourier Transforms |
| e1071::plot.svm |
| Plot SVM Objects |
| e1071::plot.tune |
| Plot Tuning Object |
| e1071::predict.svm |
| Predict Method for Support Vector Machines |
| e1071::probplot |
| Probability Plot |
| e1071::rbridge |
| Simulation of Brownian Bridge |
| e1071::read.matrix.csr |
| Read/Write Sparse Data |
| e1071::rectangle.window |
| Computes the Coefficients of a Rectangle Window. |
| e1071::rwiener |
| Simulation of Wiener Process |
| e1071::scale_data_frame |
| Scaling and Centering of Data Frames |
| e1071::allShortestPaths |
| Find Shortest Paths Between All Nodes in a Directed Graph |
| e1071::sigmoid |
| The Logistic Function and Derivatives |
| e1071::skewness |
| Skewness |
| e1071::stft |
| Computes the Short Time Fourier Transform of a Vector |
| e1071::svm |
| Support Vector Machines |
| e1071::tune |
| Parameter Tuning of Functions Using Grid Search |
| e1071::tune.control |
| Control Parameters for the Tune Function |
| e1071::tune.wrapper |
| Convenience Tuning Wrapper Functions |
| e1071::write.svm |
| Write SVM Object to File |
| emmeans::MOats |
| Oats data in multivariate form |
| emmeans::auto.noise |
| Auto Pollution Filter Noise |
| emmeans::emm_options |
| Set or change emmeans options |
| emmeans::feedlot |
| Feedlot data |
| emmeans::fiber |
| Fiber data |
| emmeans::neuralgia |
| Neuralgia data |
| emmeans::nutrition |
| Nutrition data |
| emmeans::oranges |
| Sales of oranges |
| emmeans::pigs |
| Effects of dietary protein on free plasma leucine concentration in pigs |
| emmeans::ubds |
| Unbalanced dataset |
| estimability::epredict |
| Estimability Enhancements for 'lm' and Relatives |
| estimability::estble.subspace |
| Find an estimable subspace |
| estimability::estimability-package |
| Estimability Tools for Linear Models |
| estimability::nonest.basis |
| Estimability Tools |
| fansi::html_esc |
| Escape Characters With Special HTML Meaning |
| fansi::in_html |
| Frame HTML in a Web Page And Display |
| fansi::make_styles |
| Generate CSS Mapping Classes to Colors |
| fansi::to_html |
| Convert Control Sequences to HTML Equivalents |
| farver::decode_colour |
| Decode RGB hex-strings into colour values |
| farver::encode_colour |
| Encode colours into RGB hex-strings |
| farver::manip_channel |
| Modify colour space channels in hex-encoded colour strings |
| FNN::KL.dist |
| Kullback-Leibler Divergence |
| FNN::KL.divergence |
| Kullback-Leibler Divergence |
| FNN::crossentropy |
| Cross Entropy |
| FNN::entropy |
| Shannon Entropy |
| FNN::get.knn |
| Search Nearest Neighbors |
| FNN::knn |
| k-Nearest Neighbour Classification |
| FNN::knn.cv |
| k-Nearest Neighbour Classification Cross-Validation |
| FNN::knn.dist |
| k Nearest Neighbor Distances |
| FNN::knn.index |
| Search Nearest Neighbors |
| FNN::knn.reg |
| k Nearest Neighbor Regression |
| FNN::mutinfo |
| Mutual Information |
| FNN::ownn |
| Optimal Weighted Nearest Neighbor Classification |
| FNN::print.knnRegCV |
| Print Method for KNN Regression |
| forcats::gss_cat |
| A sample of categorical variables from the General Social survey |
| geojsonsf::geo_melbourne |
| geo_melbourne |
| geosphere::OSGB |
| Ordnance Survey for Great Britain grid reference system |
| geosphere::alongTrackDistance |
| Along Track Distance |
| geosphere::antipode |
| Antipodes |
| geosphere::areaPolygon |
| Area of a longitude/latitude polygon |
| geosphere::bearing |
| Direction of travel |
| geosphere::bearingRhumb |
| Rhumbline direction |
| geosphere::centroid |
| Centroid of spherical polygons |
| geosphere::wrld |
| World countries |
| geosphere::daylength |
| Daylength |
| geosphere::destPoint |
| Destination given bearing (direction) and distance |
| geosphere::destPointRhumb |
| Destination along a rhumb line |
| geosphere::dist2gc |
| Cross Track Distance |
| geosphere::dist2Line |
| Distance between points and lines or the border of polygons. |
| geosphere::distCosine |
| 'Law of cosines' great circle distance |
| geosphere::distGeo |
| Distance on an ellipsoid (the geodesic) |
| geosphere::distHaversine |
| 'Haversine' great circle distance |
| geosphere::distMeeus |
| 'Meeus' great circle distance |
| geosphere::distRhumb |
| Distance along a rhumb line |
| geosphere::distVincentyEllipsoid |
| 'Vincenty' (ellipsoid) great circle distance |
| geosphere::distVincentySphere |
| 'Vincenty' (sphere) great circle distance |
| geosphere::distm |
| Distance matrix |
| geosphere::finalBearing |
| Final direction |
| geosphere::gcIntersect |
| Intersections of two great circles |
| geosphere::gcIntersectBearing |
| Intersections of two great circles |
| geosphere::gcLat |
| Latitude on a Great Circle |
| geosphere::gcLon |
| Longitude on a Great Circle |
| geosphere::gcMaxLat |
| Highest latitude on a great circle |
| geosphere::geodesic |
| geodesic and inverse geodesic problem |
| geosphere::geomean |
| Mean location of sperhical coordinates |
| geosphere::geosphere-package |
| Geosphere |
| geosphere::greatCircle |
| Great circle |
| geosphere::greatCircleBearing |
| Great circle |
| geosphere::horizon |
| Distance to the horizon |
| geosphere::gcIntermediate |
| Intermediate points on a great circle (sphere) |
| geosphere::lengthLine |
| Length of lines |
| geosphere::makePoly |
| Add vertices to a polygon or line |
| geosphere::mercator |
| Mercator projection |
| geosphere::midPoint |
| Mid-point |
| geosphere::onGreatCircle |
| Is a point on a given great circle? |
| geosphere::perimeter |
| Compute the perimeter of a longitude/latitude polygon |
| geosphere::plotArrows |
| Plot |
| geosphere::randomCoordinates |
| Random or regularly distributed coordinates on the globe |
| geosphere::refEllipsoids |
| Reference ellipsoids |
| geosphere::span |
| Span of polygons |
| GGally::australia_PISA2012 |
| Programme for International Student Assessment (PISA) 2012 Data for Australia |
| GGally::flea |
| Historical data used for classification examples. |
| GGally::getPlot |
| Subset a 'ggmatrix' object |
| GGally::ggally_autopoint |
| Scatterplot for continuous and categorical variables |
| GGally::ggally_barDiag |
| Bar plot |
| GGally::ggally_blank |
| Blank plot |
| GGally::ggally_box |
| Box plot |
| GGally::ggally_colbar |
| Column and row bar plots |
| GGally::ggally_cor |
| Correlation value plot |
| GGally::ggally_cor_v1_5 |
| Correlation value plot |
| GGally::ggally_count |
| Display counts of observations |
| GGally::ggally_cross |
| Plots the number of observations |
| GGally::ggally_density |
| Bivariate density plot |
| GGally::ggally_densityDiag |
| Univariate density plot |
| GGally::ggally_denstrip |
| Tile plot with facets |
| GGally::ggally_dot |
| Grouped dot plot |
| GGally::ggally_facetbar |
| Faceted bar plot |
| GGally::ggally_facetdensity |
| Faceted density plot |
| GGally::ggally_facetdensitystrip |
| Density or tiles plot with facets |
| GGally::ggally_facethist |
| Faceted histogram |
| GGally::ggally_na |
| NA plot |
| GGally::ggally_points |
| Scatter plot |
| GGally::ggally_ratio |
| Mosaic plot |
| GGally::ggally_smooth |
| Scatter plot with a smoothed line |
| GGally::ggally_summarise_by |
| Summarize a continuous variable by each value of a discrete variable |
| GGally::ggally_table |
| Display a table of the number of observations |
| GGally::ggally_text |
| Text plot |
| GGally::ggally_trends |
| Trends line plot |
| GGally::ggmatrix |
| 'ggplot2' plot matrix |
| GGally::ggpairs |
| ggplot2 generalized pairs plot |
| GGally::happy |
| Data related to happiness from the General Social Survey, 1972-2006. |
| GGally::nasa |
| Data from the Data Expo JSM 2006. |
| GGally::pigs |
| United Kingdom Pig Production |
| GGally::psychademic |
| UCLA canonical correlation analysis data |
| GGally::putPlot |
| Insert a plot into a 'ggmatrix' object |
| GGally::stat_cross |
| Compute cross-tabulation statistics |
| GGally::stat_prop |
| Compute proportions according to custom denominator |
| GGally::stat_weighted_mean |
| Compute weighted y mean |
| GGally::twitter_spambots |
| Twitter spambots |
| ggmosaic::GeomMosaic |
| Geom proto |
| ggmosaic::GeomMosaicJitter |
| Geom proto |
| ggmosaic::GeomMosaicText |
| Geom proto |
| ggmosaic::StatMosaic |
| Geom proto |
| ggmosaic::StatMosaicJitter |
| Geom proto |
| ggmosaic::StatMosaicText |
| Geom proto |
| ggmosaic::fly |
| Flying Etiquette Survey Data |
| ggmosaic::happy |
| Data related to happiness from the general social survey. |
| ggmosaic::scale_x_productlist |
| Determining scales for mosaics |
| ggmosaic::titanic |
| Passengers and crew on board the Titanic |
| ggplot2::diamonds |
| Prices of over 50,000 round cut diamonds |
| ggplot2::economics |
| US economic time series |
| ggplot2::faithfuld |
| 2d density estimate of Old Faithful data |
| ggplot2::ggplot2-ggproto |
| Base ggproto classes for ggplot2 |
| ggplot2::CoordSf |
| Visualise sf objects |
| ggplot2::.pt |
| Graphical units |
| ggplot2::guide_bins |
| A binned version of guide_legend |
| ggplot2::guide_colourbar |
| Continuous colour bar guide |
| ggplot2::guide_coloursteps |
| Discretized colourbar guide |
| ggplot2::guide_legend |
| Legend guide |
| ggplot2::guides |
| Set guides for each scale |
| ggplot2::labeller |
| Construct labelling specification |
| ggplot2::labellers |
| Useful labeller functions |
| ggplot2::luv_colours |
| 'colors()' in Luv space |
| ggplot2::midwest |
| Midwest demographics |
| ggplot2::mpg |
| Fuel economy data from 1999 to 2008 for 38 popular models of cars |
| ggplot2::msleep |
| An updated and expanded version of the mammals sleep dataset |
| ggplot2::position_dodge |
| Dodge overlapping objects side-to-side |
| ggplot2::position_identity |
| Don't adjust position |
| ggplot2::position_jitter |
| Jitter points to avoid overplotting |
| ggplot2::position_jitterdodge |
| Simultaneously dodge and jitter |
| ggplot2::position_nudge |
| Nudge points a fixed distance |
| ggplot2::position_stack |
| Stack overlapping objects on top of each another |
| ggplot2::presidential |
| Terms of 11 presidents from Eisenhower to Obama |
| ggplot2::print.ggplot |
| Explicitly draw plot |
| ggplot2::scale_alpha |
| Alpha transparency scales |
| ggplot2::scale_x_binned |
| Positional scales for binning continuous data (x & y) |
| ggplot2::scale_colour_brewer |
| Sequential, diverging and qualitative colour scales from ColorBrewer |
| ggplot2::scale_colour_continuous |
| Continuous and binned colour scales |
| ggplot2::scale_x_continuous |
| Position scales for continuous data (x & y) |
| ggplot2::scale_x_date |
| Position scales for date/time data |
| ggplot2::scale_x_discrete |
| Position scales for discrete data |
| ggplot2::scale_colour_gradient |
| Gradient colour scales |
| ggplot2::scale_colour_grey |
| Sequential grey colour scales |
| ggplot2::scale_colour_hue |
| Evenly spaced colours for discrete data |
| ggplot2::scale_colour_steps |
| Binned gradient colour scales |
| ggplot2::scale_colour_viridis_d |
| Viridis colour scales from viridisLite |
| ggplot2::seals |
| Vector field of seal movements |
| ggplot2::stat_sf_coordinates |
| Extract coordinates from 'sf' objects |
| ggplot2::txhousing |
| Housing sales in TX |
| ggrepel::GeomLabelRepel |
| GeomLabelRepel |
| ggrepel::position_nudge_repel |
| Nudge labels a fixed distance from points |
| ggridges::Aus_athletes |
| Australian athletes |
| ggridges::Catalan_elections |
| Results from Catalan regional elections (1980-2015) |
| ggridges::geom_density_line |
| Smoothed density estimates drawn with a ridgeline rather than area |
| ggridges::geom_density_ridges |
| Create ridgeline plot |
| ggridges::geom_ridgeline |
| Plot a ridgeline (line with filled area underneath) |
| ggridges::geom_ridgeline_gradient |
| Plot ridgelines and ridgeline plots with fill gradients along the x axis |
| ggridges::geom_vridgeline |
| Plot a vertical ridgeline (ridgeline rotated 90 degrees) |
| ggridges::lincoln_weather |
| Weather in Lincoln, Nebraska in 2016. |
| ggridges::position_points_jitter |
| Randomly jitter the points in a ridgeline plot |
| ggridges::position_points_sina |
| Randomly distribute points in a ridgeline plot between baseline and ridgeline |
| ggridges::position_raincloud |
| Create a cloud of randomly jittered points below a ridgeline plot |
| ggridges::scale_colour_cyclical |
| Create a discrete scale that cycles between values |
| ggridges::stat_binline |
| Stat for histogram ridgeline plots |
| ggridges::stat_density_ridges |
| Stat for density ridgeline plots |
| ggtext::geom_richtext |
| Richtext labels |
| ggthemes::calc_pal |
| Calc color palette (discrete) |
| ggthemes::calc_shape_pal |
| Calc shape palette (discrete) |
| ggthemes::canva_palettes |
| 150 Color Palettes from Canva |
| ggthemes::circlefill_shape_pal |
| Filled Circle Shape palette (discrete) |
| ggthemes::cleveland_shape_pal |
| Shape palette from Cleveland "Elements of Graphing Data" (discrete). |
| ggthemes::colorblind_pal |
| Colorblind Color Palette (Discrete) and Scales |
| ggthemes::economist_pal |
| Economist color palette (discrete) |
| ggthemes::excel_new_pal |
| Excel (current versions) color palettes (discrete) |
| ggthemes::excel_pal |
| Excel 97 ugly color palettes (discrete) |
| ggthemes::few_pal |
| Color Palettes Few "Show Me the Numbers" |
| ggthemes::fivethirtyeight_pal |
| FiveThirtyEight color palette |
| ggthemes::gdocs_pal |
| Google Docs color palette (discrete) |
| ggthemes::geom_rangeframe |
| Range Frames |
| ggthemes::geom_tufteboxplot |
| Tufte's Box Plot |
| ggthemes::ggthemes_data |
| Palette and theme data |
| ggthemes::hc_pal |
| Highcharts color palette (discrete) |
| ggthemes::palette_pander |
| Color palette from the pander package |
| ggthemes::ptol_pal |
| Color Palettes from Paul Tol's "Colour Schemes" |
| ggthemes::scale_fill_calc |
| LibreOffice Calc color scales |
| ggthemes::scale_colour_tableau |
| Tableau color scales (discrete) |
| ggthemes::scale_colour_gradient2_tableau |
| Tableau diverging colour scales (continuous) |
| ggthemes::scale_colour_gradient_tableau |
| Tableau sequential colour scales (continuous) |
| ggthemes::scale_colour_economist |
| Economist color scales |
| ggthemes::scale_fill_excel |
| Excel 97 ugly color scales |
| ggthemes::scale_colour_excel_new |
| Excel (current versions) color scales |
| ggthemes::scale_colour_few |
| Color scales from Few's "Practical Rules for Using Color in Charts" |
| ggthemes::scale_colour_fivethirtyeight |
| FiveThirtyEight color scales |
| ggthemes::scale_fill_gdocs |
| Google Docs color scales |
| ggthemes::scale_colour_hc |
| Highcharts color and fill scales |
| ggthemes::scale_linetype_stata |
| Stata linetype palette (discrete) |
| ggthemes::scale_color_pander |
| Color scale from the pander package |
| ggthemes::scale_colour_ptol |
| Color Scales from Paul Tol's "Colour Schemes |
| ggthemes::scale_shape_calc |
| Calc shape scale |
| ggthemes::scale_shape_circlefill |
| Filled Circle Shape palette (discrete) |
| ggthemes::scale_shape_cleveland |
| Shape scales from Cleveland "Elements of Graphing Data" |
| ggthemes::scale_shape_stata |
| Stata shape scale |
| ggthemes::scale_shape_tableau |
| Tableau shape scales |
| ggthemes::scale_shape_tremmel |
| Shape scales from Tremmel (1995) |
| ggthemes::scale_fill_solarized |
| Solarized color scales |
| ggthemes::scale_colour_stata |
| Stata color scales |
| ggthemes::scale_colour_wsj |
| Wall Street Journal color and fill scales |
| ggthemes::solarized_pal |
| Solarized color palette (discrete) |
| ggthemes::stat_fivenumber |
| Calculate components of a five-number summary |
| ggthemes::stata_linetype_pal |
| Stata linetype palette (discrete) |
| ggthemes::stata_pal |
| Stata color palettes (discrete) |
| ggthemes::stata_shape_pal |
| Stata shape palette (discrete) |
| ggthemes::tableau_color_pal |
| Tableau Color Palettes (discrete) |
| ggthemes::tableau_gradient_pal |
| Tableau colour gradient palettes (continuous) |
| ggthemes::tableau_shape_pal |
| Tableau Shape Palettes (discrete) |
| ggthemes::theme_base |
| Theme Base |
| ggthemes::theme_calc |
| Theme Calc |
| ggthemes::theme_clean |
| Clean ggplot theme |
| ggthemes::theme_economist |
| ggplot color theme based on the Economist |
| ggthemes::theme_excel |
| ggplot theme based on old Excel plots |
| ggthemes::theme_excel_new |
| ggplot theme similar to current Excel plot defaults |
| ggthemes::theme_few |
| Theme based on Few's "Practical Rules for Using Color in Charts" |
| ggthemes::theme_fivethirtyeight |
| Theme inspired by FiveThirtyEight plots |
| ggthemes::theme_foundation |
| Foundation Theme |
| ggthemes::theme_gdocs |
| Theme with Google Docs Chart defaults |
| ggthemes::theme_hc |
| Highcharts Theme |
| ggthemes::theme_igray |
| Inverse gray theme |
| ggthemes::theme_par |
| Theme which uses the current 'base' graphics parameter values from 'par()'. Not all 'par()' parameters, are supported, and not all are relevant to 'ggplot2' themes. |
| ggthemes::theme_solarized |
| ggplot color themes based on the Solarized palette |
| ggthemes::theme_solid |
| Theme with nothing other than a background color |
| ggthemes::theme_stata |
| Themes based on Stata graph schemes |
| ggthemes::theme_tufte |
| Tufte Maximal Data, Minimal Ink Theme |
| ggthemes::theme_wsj |
| Wall Street Journal theme |
| ggthemes::tremmel_shape_pal |
| Shape palette from Tremmel (1995) (discrete) |
| ggthemes::wsj_pal |
| Wall Street Journal color palette (discrete) |
| gistr::gistr-package |
| R client for GitHub gists |
| gridExtra::gridExtra-package |
| Miscellaneous Functions for "Grid" Graphics |
| gridSVG::animUnit |
| Generate a set of animation values. |
| gridSVG::animate |
| Convert animation specifications to SVG elements. |
| gridSVG::garnish |
| Convert animation specifications to SVG elements. |
| gridSVG::getSVGFonts |
| Manage SVG fonts |
| gridSVG::grid.animate |
| Animate a grid grob |
| gridSVG::grid.comment |
| Create a grid grob representing a comment |
| gridSVG::grid.element |
| Create a grid grob representing an SVG element |
| gridSVG::grid.export |
| Generate SVG output from a grid graphic |
| gridSVG::grid.garnish |
| Associate arbitrary SVG attributes with a grid grob |
| gridSVG::grid.hyperlink |
| Associate a hyperlink with a grid grob |
| gridSVG::grid.script |
| Create a grid grob containing an SVG script |
| gridSVG::grobToDev |
| Convert a grob to device calls |
| gridSVG::primToDev |
| Convert a grob to device calls |
| gridSVG::setSVGoptions |
| Get and Set Global Options |
| gtable::gtable |
| Create a new grob table. |
| gtable::gtable_add_cols |
| Add new columns in specified position. |
| gtable::gtable_add_grob |
| Add a single grob, possibly spanning multiple rows or columns. |
| gtable::gtable_add_padding |
| Add padding around edges of table. |
| gtable::gtable_add_rows |
| Add new rows in specified position. |
| gtable::gtable_add_space |
| Add row/column spacing. |
| gtable::gtable_col |
| Create a single column gtable |
| gtable::gtable_filter |
| Filter cells by name |
| gtable::gtable_matrix |
| Create a gtable from a matrix of grobs. |
| gtable::gtable_row |
| Create a single row gtable. |
| gtable::gtable_spacer |
| Create a row/col spacer gtable. |
| gtable::gtable_trim |
| Trim off empty cells. |
| haven::zap_empty |
| Convert empty strings into missing values |
| haven::zap_formats |
| Remove format attributes |
| haven::zap_label |
| Zap variable labels |
| haven::zap_labels |
| Zap value labels |
| haven::zap_widths |
| Remove display width attributes |
| hexbin::NHANES |
| NHANES Data : National Health and Nutrition Examination Survey |
| hexbin::ColorRamps |
| Color Ramps on Perceptually Linear Scales |
| hexbin::erode |
| Erosion of a Hexagon Count Image |
| hexbin::getHMedian |
| Get coordiantes of the median cell after the erode operation |
| hexbin::gplot.hexbin |
| Plotting Hexagon Cells with a Legend |
| hexbin::grid.hexagons |
| Add Hexagon Cells to Plot |
| hexbin::grid.hexlegend |
| Add a Legend to a Hexbin Plot |
| hexbin::hboxplot |
| 2-D Generalization of Boxplot |
| hexbin::hcell2xy |
| Compute X and Y Coordinates for Hexagon Cells |
| hexbin::hcell2xyInt |
| Change cell ids to 2d integer coordinate system |
| hexbin::hdiffplot |
| Plot of Domain and Median Differences of Two "hexbin" Objects |
| hexbin::hexGraphPaper |
| Create a Hexgon Grid |
| hexbin::hexList |
| Conditional Bivariate Binning into Hexagon Cells |
| hexbin::hexVP.loess |
| Add Loess Fit to Hexplot |
| hexbin::hexTapply |
| Apply function to data from each hexagon bin. |
| hexbin::hexVP-class |
| Formal class "hexVP" of a Hexagon Viewport |
| hexbin::hexVP.abline |
| Add a Straight Line to a HexPlot |
| hexbin::hexViewport |
| Compute a Grid Viewport for Hexagon / Hexbin Graphics |
| hexbin::hexbin |
| Bivariate Binning into Hexagon Cells |
| hexbin::hexbinplot |
| Trellis Hexbin Displays |
| hexbin::hexplom |
| Hexbin Plot Matrices |
| hexbin::hexpolygon |
| Hexagon Coordinates and Polygon Drawing |
| hexbin::hsmooth |
| Hexagon Bin Smoothing: Generic hsmooth() and Methods |
| hexbin::inout.hex |
| Check points for inclusion |
| hexbin::list2hexList |
| Convert list to hexList |
| hexbin::unit-class |
| Class "unit" and "viewport" as S4 classes |
| hexbin::optShape |
| Optimal Shape Parameter for Hexbin Viewport |
| hexbin::panel.hexboxplot |
| Boxplot for hexbin lattice plot |
| hexbin::panel.hexgrid |
| Hexagonal grid for a lattice plot |
| hexbin::panel.hexloess |
| Loess line for hexbin lattice plot |
| hexbin::plotMAhex |
| MA-plot using hexagon bins |
| hexbin::pushHexport |
| Push a Hexagon Viewport ("hexVP") |
| hexbin::smooth.hexbin |
| Hexagon Bin Smoothing |
| hextri::hextri |
| Hexagonal binning with classes |
| hextri::panel.hextri |
| A lattice panel function for hexagonal binning with classes |
| htmlTable::SCB |
| Average age in Sweden |
| htmlTable::addHtmlTableStyle |
| Add/set css and other style options |
| htmlTable::hasHtmlTableStyle |
| Check if object has a style set to it |
| htmlTable::htmlTable |
| Output an HTML table |
| htmlTable::prAddCells |
| Add a cell |
| htmlTable::prAddEmptySpacerCell |
| Add an empty cell |
| htmlTable::prAddSemicolon2StrEnd |
| Add a ; at the end |
| htmlTable::prEscapeHtml |
| Remove html entities from table |
| htmlTable::prGetAlign |
| Gets alignment |
| htmlTable::prGetCgroupHeader |
| Retrieve a header row |
| htmlTable::prGetRowlabelPos |
| Gets the rowlabel position |
| htmlTable::prGetStyle |
| Gets the CSS style element |
| htmlTable::prPrepInputMatrixDimensions |
| Makes sure the input is correct |
| htmlTable::prPrepareAlign |
| Prepares the align to match the columns |
| htmlTable::prPrepareCgroup |
| Prepares the cgroup argument |
| htmlTable::prTblNo |
| Gets the table counter string |
| htmlTable::tblNoLast |
| Gets the last table number |
| htmlTable::tblNoNext |
| Gets the next table number |
| htmlTable::txtInt |
| SI or English formatting of an integer |
| htmlTable::txtMergeLines |
| A merges lines while preserving the line break for HTML/LaTeX |
| htmlTable::txtPval |
| Formats the p-values |
| htmlTable::txtRound |
| A convenient rounding function |
| httpcode::httpcode-package |
| httpcode |
| httpuv::httpuv-package |
| HTTP and WebSocket server |
| igraph::E |
| Edges of a graph |
| igraph::V |
| Vertices of a graph |
| igraph::add_edges |
| Add edges to a graph |
| igraph::add_layout_ |
| Add layout to graph |
| igraph::add_vertices |
| Add vertices to a graph |
| igraph::adjacent_vertices |
| Adjacent vertices of multiple vertices in a graph |
| igraph::all_simple_paths |
| List all simple paths from one source |
| igraph::alpha_centrality |
| Find Bonacich alpha centrality scores of network positions |
| igraph::are_adjacent |
| Are two vertices adjacent? |
| igraph::arpack_defaults |
| ARPACK eigenvector calculation |
| igraph::articulation_points |
| Articulation points and bridges of a graph |
| igraph::as.directed |
| Convert between directed and undirected graphs |
| igraph::as.igraph |
| Conversion to igraph |
| igraph::as_adj_list |
| Adjacency lists |
| igraph::as_edgelist |
| Convert a graph to an edge list |
| igraph::as_incidence_matrix |
| Incidence matrix of a bipartite graph |
| igraph::assortativity |
| Assortativity coefficient |
| igraph::automorphism_group |
| Generating set of the automorphism group of a graph |
| igraph::automorphisms |
| Number of automorphisms |
| igraph::estimate_betweenness |
| Vertex and edge betweenness centrality |
| igraph::bfs |
| Breadth-first search |
| igraph::biconnected_components |
| Biconnected components |
| igraph::bipartite_mapping |
| Decide whether a graph is bipartite |
| igraph::bipartite_projection |
| Project a bipartite graph |
| igraph::c.igraph.es |
| Concatenate edge sequences |
| igraph::c.igraph.vs |
| Concatenate vertex sequences |
| igraph::canonical_permutation |
| Canonical permutation of a graph |
| igraph::categorical_pal |
| Palette for categories |
| igraph::centr_betw |
| Centralize a graph according to the betweenness of vertices |
| igraph::centr_betw_tmax |
| Theoretical maximum for betweenness centralization |
| igraph::centr_clo |
| Centralize a graph according to the closeness of vertices |
| igraph::centr_clo_tmax |
| Theoretical maximum for closeness centralization |
| igraph::centr_degree |
| Centralize a graph according to the degrees of vertices |
| igraph::centr_degree_tmax |
| Theoretical maximum for degree centralization |
| igraph::centr_eigen |
| Centralize a graph according to the eigenvector centrality of vertices |
| igraph::centr_eigen_tmax |
| Theoretical maximum for betweenness centralization |
| igraph::centralize |
| Centralization of a graph |
| igraph::cliques |
| Functions to find cliques, ie. complete subgraphs in a graph |
| igraph::closeness |
| Closeness centrality of vertices |
| igraph::cluster_edge_betweenness |
| Community structure detection based on edge betweenness |
| igraph::cluster_fast_greedy |
| Community structure via greedy optimization of modularity |
| igraph::cluster_fluid_communities |
| Community detection algorithm based on interacting fluids |
| igraph::cluster_infomap |
| Infomap community finding |
| igraph::cluster_label_prop |
| Finding communities based on propagating labels |
| igraph::cluster_leading_eigen |
| Community structure detecting based on the leading eigenvector of the community matrix |
| igraph::cluster_leiden |
| Finding community structure of a graph using the Leiden algorithm of Traag, van Eck & Waltman. |
| igraph::cluster_louvain |
| Finding community structure by multi-level optimization of modularity |
| igraph::cluster_optimal |
| Optimal community structure |
| igraph::cluster_spinglass |
| Finding communities in graphs based on statistical meachanics |
| igraph::cluster_walktrap |
| Community structure via short random walks |
| igraph::cocitation |
| Cocitation coupling |
| igraph::cohesive_blocks |
| Calculate Cohesive Blocks |
| igraph::membership |
| Functions to deal with the result of network community detection |
| igraph::compare |
| Compares community structures using various metrics |
| igraph::complementer |
| Complementer of a graph |
| igraph::component_wise |
| Component-wise layout |
| igraph::component_distribution |
| Connected components of a graph |
| igraph::compose |
| Compose two graphs as binary relations |
| igraph::consensus_tree |
| Create a consensus tree from several hierarchical random graph models |
| igraph::console |
| The igraph console |
| igraph::constraint |
| Burt's constraint |
| igraph::contract |
| Contract several vertices into a single one |
| igraph::convex_hull |
| Convex hull of a set of vertices |
| igraph::coreness |
| K-core decomposition of graphs |
| igraph::count_isomorphisms |
| Count the number of isomorphic mappings between two graphs |
| igraph::count_motifs |
| Graph motifs |
| igraph::count_subgraph_isomorphisms |
| Count the isomorphic mappings between a graph and the subgraphs of another graph |
| igraph::count_triangles |
| Find triangles in graphs |
| igraph::curve_multiple |
| Optimal edge curvature when plotting graphs |
| igraph::decompose |
| Decompose a graph into components |
| igraph::degree |
| Degree and degree distribution of the vertices |
| igraph::delete_edge_attr |
| Delete an edge attribute |
| igraph::delete_edges |
| Delete edges from a graph |
| igraph::delete_graph_attr |
| Delete a graph attribute |
| igraph::delete_vertex_attr |
| Delete a vertex attribute |
| igraph::delete_vertices |
| Delete vertices from a graph |
| igraph::dfs |
| Depth-first search |
| igraph::diameter |
| Diameter of a graph |
| igraph::difference.igraph |
| Difference of graphs |
| igraph::difference.igraph.es |
| Difference of edge sequences |
| igraph::difference.igraph.vs |
| Difference of vertex sequences |
| igraph::dim_select |
| Dimensionality selection for singular values using profile likelihood. |
| igraph::disjoint_union |
| Disjoint union of graphs |
| igraph::distance_table |
| Shortest (directed or undirected) paths between vertices |
| igraph::diverging_pal |
| Diverging palette |
| igraph::diversity |
| Graph diversity |
| igraph::dominator_tree |
| Dominator tree |
| igraph::dyad_census |
| Dyad census of a graph |
| igraph::each_edge |
| Rewires the endpoints of the edges of a graph to a random vertex |
| igraph::edge |
| Helper function for adding and deleting edges |
| igraph::edge_attr<- |
| Set one or more edge attributes |
| igraph::edge_attr |
| Query edge attributes of a graph |
| igraph::edge_attr_names |
| List names of edge attributes |
| igraph::edge_connectivity |
| Edge connectivity. |
| igraph::edge_density |
| Graph density |
| igraph::ego_size |
| Neighborhood of graph vertices |
| igraph::eigen_centrality |
| Find Eigenvector Centrality Scores of Network Positions |
| igraph::embed_adjacency_matrix |
| Spectral Embedding of Adjacency Matrices |
| igraph::embed_laplacian_matrix |
| Spectral Embedding of the Laplacian of a Graph |
| igraph::ends |
| Incident vertices of some graph edges |
| igraph::erdos.renyi.game |
| Generate random graphs according to the Erdos-Renyi model |
| igraph::feedback_arc_set |
| Finding a feedback arc set in a graph |
| igraph::fit_hrg |
| Fit a hierarchical random graph model |
| igraph::fit_power_law |
| Fitting a power-law distribution function to discrete data |
| igraph::get.edge.ids |
| Find the edge ids based on the incident vertices of the edges |
| igraph::girth |
| Girth of a graph |
| igraph::global_efficiency |
| Efficiency of a graph |
| igraph::gorder |
| Order (number of vertices) of a graph |
| igraph::graph_attr<- |
| Set all or some graph attributes |
| igraph::graph_attr |
| Graph attributes of a graph |
| igraph::graph_attr_names |
| List names of graph attributes |
| igraph::graph_from_adj_list |
| Create graphs from adjacency lists |
| igraph::graph_from_adjacency_matrix |
| Create graphs from adjacency matrices |
| igraph::graph_from_atlas |
| Create a graph from the Graph Atlas |
| igraph::as_data_frame |
| Creating igraph graphs from data frames or vice-versa |
| igraph::graph_from_edgelist |
| Create a graph from an edge list matrix |
| igraph::graph_from_graphdb |
| Load a graph from the graph database for testing graph isomorphism. |
| igraph::graph_from_incidence_matrix |
| Create graphs from an incidence matrix |
| igraph::graph_from_isomorphism_class |
| Create a graph from an isomorphism class |
| igraph::graph_from_lcf |
| Creating a graph from LCF notation |
| igraph::graph_from_literal |
| Creating (small) graphs via a simple interface |
| igraph::greedy_vertex_coloring |
| Greedy vertex coloring |
| igraph::gsize |
| The size of the graph (number of edges) |
| igraph::harmonic_centrality |
| Harmonic centrality of vertices |
| igraph::has_eulerian_path |
| Find Eulerian paths or cycles in a graph |
| igraph::head_of |
| Head of the edge(s) in a graph |
| igraph::hrg-methods |
| Hierarchical random graphs |
| igraph::hrg |
| Create a hierarchical random graph from an igraph graph |
| igraph::hrg_tree |
| Create an igraph graph from a hierarchical random graph model |
| igraph::igraph-attribute-combination |
| How igraph functions handle attributes when the graph changes |
| igraph::igraph-dollar |
| Getting and setting graph attributes, shortcut |
| igraph::igraph-es-attributes |
| Query or set attributes of the edges in an edge sequence |
| igraph::igraph-es-indexing |
| Indexing edge sequences |
| igraph::igraph-es-indexing2 |
| Select edges and show their metadata |
| igraph::igraph-minus |
| Delete vertices or edges from a graph |
| igraph::igraph-vs-attributes |
| Query or set attributes of the vertices in a vertex sequence |
| igraph::igraph-vs-indexing |
| Indexing vertex sequences |
| igraph::igraph-vs-indexing2 |
| Select vertices and show their metadata |
| igraph::igraph_demo |
| Run igraph demos, step by step |
| igraph::igraph_options |
| Parameters for the igraph package |
| igraph::igraph_test |
| Run package tests |
| igraph::igraph_version |
| Query igraph's version string |
| igraph::incident |
| Incident edges of a vertex in a graph |
| igraph::incident_edges |
| Incident edges of multiple vertices in a graph |
| igraph::intersection.igraph |
| Intersection of graphs |
| igraph::intersection.igraph.es |
| Intersection of edge sequences |
| igraph::intersection.igraph.vs |
| Intersection of vertex sequences |
| igraph::is_chordal |
| Chordality of a graph |
| igraph::is_dag |
| Directed acyclic graphs |
| igraph::is_degseq |
| Check if a degree sequence is valid for a multi-graph |
| igraph::is_directed |
| Check whether a graph is directed |
| igraph::is_graphical |
| Is a degree sequence graphical? |
| igraph::is_igraph |
| Is this object an igraph graph? |
| igraph::is_named |
| Named graphs |
| igraph::is_printer_callback |
| Is this a printer callback? |
| igraph::is_tree |
| Decide whether a graph is a tree. |
| igraph::is_weighted |
| Weighted graphs |
| igraph::isomorphic |
| Decide if two graphs are isomorphic |
| igraph::isomorphism_class |
| Isomorphism class of a graph |
| igraph::isomorphisms |
| Calculate all isomorphic mappings between the vertices of two graphs |
| igraph::ivs |
| Independent vertex sets |
| igraph::keeping_degseq |
| Graph rewiring while preserving the degree distribution |
| igraph::knn |
| Average nearest neighbor degree |
| igraph::laplacian_matrix |
| Graph Laplacian |
| igraph::layout_ |
| Graph layouts |
| igraph::layout_as_bipartite |
| Simple two-row layout for bipartite graphs |
| igraph::layout_as_star |
| Generate coordinates to place the vertices of a graph in a star-shape |
| igraph::layout_as_tree |
| The Reingold-Tilford graph layout algorithm |
| igraph::layout_in_circle |
| Graph layout with vertices on a circle. |
| igraph::layout_nicely |
| Choose an appropriate graph layout algorithm automatically |
| igraph::layout_on_grid |
| Simple grid layout |
| igraph::layout_on_sphere |
| Graph layout with vertices on the surface of a sphere |
| igraph::layout_randomly |
| Randomly place vertices on a plane or in 3d space |
| igraph::layout_with_dh |
| The Davidson-Harel layout algorithm |
| igraph::layout_with_drl |
| The DrL graph layout generator |
| igraph::layout_with_fr |
| The Fruchterman-Reingold layout algorithm |
| igraph::layout_with_gem |
| The GEM layout algorithm |
| igraph::layout_with_graphopt |
| The graphopt layout algorithm |
| igraph::layout_with_kk |
| The Kamada-Kawai layout algorithm |
| igraph::layout_with_lgl |
| Large Graph Layout |
| igraph::layout_with_mds |
| Graph layout by multidimensional scaling |
| igraph::layout_with_sugiyama |
| The Sugiyama graph layout generator |
| igraph::local_scan |
| Compute local scan statistics on graphs |
| igraph::is_bipartite |
| Create a bipartite graph |
| igraph::make_chordal_ring |
| Create an extended chordal ring graph |
| igraph::make_de_bruijn_graph |
| De Bruijn graphs |
| igraph::make_empty_graph |
| A graph with no edges |
| igraph::make_from_prufer |
| Create an undirected tree graph from its Prufer sequence |
| igraph::make_full_bipartite_graph |
| Create a full bipartite graph |
| igraph::make_full_citation_graph |
| Create a complete (full) citation graph |
| igraph::make_full_graph |
| Create a full graph |
| igraph::make_graph |
| Create an igraph graph from a list of edges, or a notable graph |
| igraph::make_kautz_graph |
| Kautz graphs |
| igraph::make_lattice |
| Create a lattice graph |
| igraph::make_line_graph |
| Line graph of a graph |
| igraph::make_ring |
| Create a ring graph |
| igraph::make_star |
| Create a star graph, a tree with n vertices and n - 1 leaves |
| igraph::make_tree |
| Create tree graphs |
| igraph::match_vertices |
| Match Graphs given a seeding of vertex correspondences |
| igraph::max_cardinality |
| Maximum cardinality search |
| igraph::merge_coords |
| Merging graph layouts |
| igraph::min_st_separators |
| Minimum size vertex separators |
| igraph::modularity.igraph |
| Modularity of a community structure of a graph |
| igraph::motifs |
| Graph motifs |
| igraph::mst |
| Minimum spanning tree |
| igraph::neighbors |
| Neighboring (adjacent) vertices in a graph |
| igraph::norm_coords |
| Normalize coordinates for plotting graphs |
| igraph::normalize |
| Normalize layout |
| igraph::page_rank |
| The Page Rank algorithm |
| igraph::path |
| Helper function to add or delete edges along a path |
| igraph::permute |
| Permute the vertices of a graph |
| igraph::igraph.plotting |
| Drawing graphs |
| igraph::plot.igraph |
| Plotting of graphs |
| igraph::plot.sir |
| Plotting the results on multiple SIR model runs |
| igraph::plot_dendrogram |
| Community structure dendrogram plots |
| igraph::plot_dendrogram.igraphHRG |
| HRG dendrogram plot |
| igraph::+.igraph |
| Add vertices, edges or another graph to a graph |
| igraph::power_centrality |
| Find Bonacich Power Centrality Scores of Network Positions |
| igraph::predict_edges |
| Predict edges based on a hierarchical random graph model |
| igraph::print.igraph |
| Print graphs to the terminal |
| igraph::print.igraph.es |
| Print an edge sequence to the screen |
| igraph::print.igraph.vs |
| Show a vertex sequence on the screen |
| igraph::print.igraphHRG |
| Print a hierarchical random graph model to the screen |
| igraph::print.igraphHRGConsensus |
| Print a hierarchical random graph consensus tree to the screen |
| igraph::printer_callback |
| Create a printer callback function |
| igraph::r_pal |
| The default R palette |
| igraph::read_graph |
| Reading foreign file formats |
| igraph::realize_degseq |
| Creating a graph from a given degree sequence, deterministically |
| igraph::reciprocity |
| Reciprocity of graphs |
| igraph::rev.igraph.es |
| Reverse the order in an edge sequence |
| igraph::rev.igraph.vs |
| Reverse the order in a vertex sequence |
| igraph::rewire |
| Rewiring edges of a graph |
| igraph::rglplot |
| 3D plotting of graphs with OpenGL |
| igraph::running_mean |
| Running mean of a time series |
| igraph::sample_bipartite |
| Bipartite random graphs |
| igraph::sample_correlated_gnp_pair |
| Sample a pair of correlated G(n,p) random graphs |
| igraph::sample_degseq |
| Generate random graphs with a given degree sequence |
| igraph::sample_dirichlet |
| Sample from a Dirichlet distribution |
| igraph::sample_dot_product |
| Generate random graphs according to the random dot product graph model |
| igraph::sample_fitness |
| Random graphs from vertex fitness scores |
| igraph::sample_fitness_pl |
| Scale-free random graphs, from vertex fitness scores |
| igraph::sample_forestfire |
| Forest Fire Network Model |
| igraph::sample_gnm |
| Generate random graphs according to the G(n,m) Erdos-Renyi model |
| igraph::sample_gnp |
| Generate random graphs according to the G(n,p) Erdos-Renyi model |
| igraph::sample_grg |
| Geometric random graphs |
| igraph::sample_growing |
| Growing random graph generation |
| igraph::sample_hierarchical_sbm |
| Sample the hierarchical stochastic block model |
| igraph::sample_hrg |
| Sample from a hierarchical random graph model |
| igraph::sample_islands |
| A graph with subgraphs that are each a random graph. |
| igraph::sample_k_regular |
| Create a random regular graph |
| igraph::sample_last_cit |
| Random citation graphs |
| igraph::sample_motifs |
| Graph motifs |
| igraph::sample_pa |
| Generate scale-free graphs according to the Barabasi-Albert model |
| igraph::sample_pa_age |
| Generate an evolving random graph with preferential attachment and aging |
| igraph::sample_pref |
| Trait-based random generation |
| igraph::sample_sbm |
| Sample stochastic block model |
| igraph::sample_seq |
| Sampling a random integer sequence |
| igraph::sample_smallworld |
| The Watts-Strogatz small-world model |
| igraph::sample_spanning_tree |
| Samples from the spanning trees of a graph randomly and uniformly |
| igraph::sample_sphere_surface |
| Sample vectors uniformly from the surface of a sphere |
| igraph::sample_sphere_volume |
| Sample vectors uniformly from the volume of a sphere |
| igraph::sample_traits_callaway |
| Graph generation based on different vertex types |
| igraph::sample_tree |
| Sample trees randomly and uniformly |
| igraph::scan_stat |
| Scan statistics on a time series of graphs |
| igraph::scg-method |
| Spectral Coarse Graining |
| igraph::scg |
| All-in-one Function for the SCG of Matrices and Graphs |
| igraph::scg_group |
| SCG Problem Solver |
| igraph::sequential_pal |
| Sequential palette |
| igraph::set_edge_attr |
| Set edge attributes |
| igraph::set_graph_attr |
| Set a graph attribute |
| igraph::set_vertex_attr |
| Set vertex attributes |
| igraph::similarity |
| Similarity measures of two vertices |
| igraph::simplified |
| Constructor modifier to drop multiple and loop edges |
| igraph::simplify |
| Simple graphs |
| igraph::time_bins.sir |
| SIR model on graphs |
| igraph::spectrum |
| Eigenvalues and eigenvectors of the adjacency matrix of a graph |
| igraph::st_cuts |
| List all (s,t)-cuts of a graph |
| igraph::st_min_cuts |
| List all minimum (s,t)-cuts of a graph |
| igraph::stochastic_matrix |
| Stochastic matrix of a graph |
| igraph::strength |
| Strength or weighted vertex degree |
| igraph::[.igraph |
| Query and manipulate a graph as it were an adjacency matrix |
| igraph::[[.igraph |
| Query and manipulate a graph as it were an adjacency list |
| igraph::subcomponent |
| In- or out- component of a vertex |
| igraph::subgraph |
| Subgraph of a graph |
| igraph::subgraph_centrality |
| Find subgraph centrality scores of network positions |
| igraph::subgraph_isomorphic |
| Decide if a graph is subgraph isomorphic to another one |
| igraph::subgraph_isomorphisms |
| All isomorphic mappings between a graph and subgraphs of another graph |
| igraph::tail_of |
| Tails of the edge(s) in a graph |
| igraph::tkigraph |
| Experimental basic igraph GUI |
| igraph::tkplot |
| Interactive plotting of graphs |
| igraph::to_prufer |
| Convert a tree graph to its Prufer sequence |
| igraph::topo_sort |
| Topological sorting of vertices in a graph |
| igraph::transitivity |
| Transitivity of a graph |
| igraph::triad_census |
| Triad census, subgraphs with three vertices |
| igraph::unfold_tree |
| Convert a general graph into a forest |
| igraph::union.igraph |
| Union of graphs |
| igraph::union.igraph.es |
| Union of edge sequences |
| igraph::union.igraph.vs |
| Union of vertex sequences |
| igraph::unique.igraph.es |
| Remove duplicate edges from an edge sequence |
| igraph::unique.igraph.vs |
| Remove duplicate vertices from a vertex sequence |
| igraph::vertex |
| Helper function for adding and deleting vertices |
| igraph::vertex.shape.pie |
| Using pie charts as vertices in graph plots |
| igraph::vertex_attr<- |
| Set one or more vertex attributes |
| igraph::vertex_attr |
| Query vertex attributes of a graph |
| igraph::vertex_attr_names |
| List names of vertex attributes |
| igraph::vertex_connectivity |
| Vertex connectivity. |
| igraph::weighted_cliques |
| Functions to find weighted cliques, ie. weighted complete subgraphs in a graph |
| igraph::which_multiple |
| Find the multiple or loop edges in a graph |
| igraph::which_mutual |
| Find mutual edges in a directed graph |
| igraph::with_edge_ |
| Constructor modifier to add edge attributes |
| igraph::with_graph_ |
| Constructor modifier to add graph attributes |
| igraph::with_igraph_opt |
| Run code with a temporary igraph options setting |
| igraph::with_vertex_ |
| Constructor modifier to add vertex attributes |
| igraph::without_attr |
| Construtor modifier to remove all attributes from a graph |
| igraph::without_loops |
| Constructor modifier to drop loop edges |
| igraph::without_multiples |
| Constructor modifier to drop multiple edges |
| igraph::write_graph |
| Writing the graph to a file in some format |
| iNZightMR::census.at.school.5000 |
| Census at School 5000 |
| iNZightMR::iNZightMR-package |
| iNZightMR: Multiple Response Data Analysis |
| iNZightTS::iNZightTS-package |
| Time Series Data Analysis |
| iNZightTS::plot.iNZightTS |
| Draw a simple time series plot |
| iNZightTS::seaice |
| Sea Ice |
| iNZightTS::visitorsA2 |
| Visitors (annual) |
| iNZightTS::visitorsM2 |
| Visitors (monthly) |
| iNZightTS::visitorsQ |
| Visitors (quarterly) |
| jpeg::readJPEG |
| Read a bitmap image stored in the JPEG format |
| jpeg::writeJPEG |
| Write a bitmap image in JPEG format |
| labeling::labeling |
| Axis labeling |
| leaflet::leafletDependencies |
| Various leaflet dependency functions for use in downstream packages |
| lme4::Arabidopsis |
| Arabidopsis clipping/fertilization data |
| lme4::Dyestuff |
| Yield of dyestuff by batch |
| lme4::InstEval |
| University Lecture/Instructor Evaluations by Students at ETH |
| lme4::NelderMead |
| Class '"NelderMead"' of Nelder-Mead optimizers and its Generator |
| lme4::Nelder_Mead |
| Nelder-Mead Optimization of Parameters, Possibly (Box) Constrained |
| lme4::Pastes |
| Paste strength by batch and cask |
| lme4::Penicillin |
| Variation in penicillin testing |
| lme4::VarCorr |
| Extract Variance and Correlation Components |
| lme4::VerbAgg |
| Verbal Aggression item responses |
| lme4::allFit |
| Refit a fitted model with all available optimizers |
| lme4::bootMer |
| Model-based (Semi-)Parametric Bootstrap for Mixed Models |
| lme4::cake |
| Breakage Angle of Chocolate Cakes |
| lme4::cbpp |
| Contagious bovine pleuropneumonia |
| lme4::devfun2 |
| Deviance Function in Terms of Standard Deviations/Correlations |
| lme4::drop1.merMod |
| Drop all possible single fixed-effect terms from a mixed effect model |
| lme4::expandDoubleVerts |
| Expand terms with "||" notation into separate "|" terms |
| lme4::factorize |
| Attempt to convert grouping variables to factors |
| lme4::findbars |
| Determine random-effects expressions from a formula |
| lme4::fixed.effects |
| Extract fixed-effects estimates |
| lme4::getL |
| Extract or Get Generalized Components from a Fitted Mixed Effects Model |
| lme4::glmFamily-class |
| Class '"glmFamily"' - a reference class for 'family' |
| lme4::glmFamily |
| Generator object for the 'glmFamily' class |
| lme4::glmer |
| Fitting Generalized Linear Mixed-Effects Models |
| lme4::glmer.nb |
| Fitting Negative Binomial GLMMs |
| lme4::glmerLaplaceHandle |
| Handle for 'glmerLaplace' |
| lme4::golden-class |
| Class '"golden"' and Generator for Golden Search Optimizer Class |
| lme4::grouseticks |
| Data on red grouse ticks from Elston et al. 2001 |
| lme4::influence.merMod |
| Influence Diagnostics for Mixed-Effects Models |
| lme4::isSingular |
| Test Fitted Model for (Near) Singularity |
| lme4::lmList |
| Fit List of lm or glm Objects with a Common Model |
| lme4::lmList4-class |
| Class "lmList4" of 'lm' Objects on Common Model |
| lme4::glmResp-class |
| Reference Classes for Response Modules, '"(lm|glm|nls|lmer)Resp"' |
| lme4::glmResp |
| Generator objects for the response classes |
| lme4::lmer |
| Fit Linear Mixed-Effects Models |
| lme4::anova.merMod |
| Class "merMod" of Fitted Mixed-Effect Models |
| lme4::merPredD-class |
| Class '"merPredD"' - a Dense Predictor Reference Class |
| lme4::merPredD |
| Generator object for the 'merPredD' class |
| lme4::mkReTrms |
| Make Random Effect Terms: Create Z, Lambda, Lind, etc. |
| lme4::glFormula |
| Modular Functions for Mixed Model Fits |
| lme4::nlmer |
| Fitting Nonlinear Mixed-Effects Models |
| lme4::nobars |
| Omit terms separated by vertical bars in a formula |
| lme4::as.data.frame.thpr |
| Profile method for merMod objects |
| lme4::ranef |
| Extract the modes of the random effects |
| lme4::rePos-class |
| Class '"rePos"' |
| lme4::rePos |
| Generator object for the rePos (random-effects positions) class |
| lme4::sleepstudy |
| Reaction times in a sleep deprivation study |
| lme4::subbars |
| "Sub[stitute] Bars" |
| lme4::.prt.methTit |
| Print and Summary Method Utilities for Mixed Effects |
| lobstr::ast |
| Display the abstract syntax tree |
| lobstr::ref |
| Display tree of references |
| lobstr::sxp |
| Inspect an object |
| lubridate::DateTimeUpdate |
| Changes the components of a date object |
| lubridate::am |
| Does date time occur in the am or pm? |
| lubridate::as.duration |
| Change an object to a duration |
| lubridate::as.interval |
| Change an object to an 'interval' |
| lubridate::as.period |
| Change an object to a period |
| lubridate::date |
| Get/set date component of a date-time |
| lubridate::date_decimal |
| Converts a decimal to a date |
| lubridate::is.Date |
| Various date utilities |
| lubridate::day |
| Get/set days component of a date-time |
| lubridate::decimal_date |
| Converts a date to a decimal of its year |
| lubridate::dst |
| Get *d*aylight *s*avings *t*ime indicator of a date-time |
| lubridate::duration |
| Create a duration object. |
| lubridate::force_tz |
| Replace time zone to create new date-time |
| lubridate::ms |
| Parse periods with *h*our, *m*inute, and *s*econd components |
| lubridate::hour |
| Get/set hours component of a date-time |
| lubridate::is.difftime |
| Is x a difftime object? |
| lubridate::is.instant |
| Is x a date-time object? |
| lubridate::is.timespan |
| Is x a length of time? |
| lubridate::lakers |
| Lakers 2008-2009 basketball data set |
| lubridate::leap_year |
| Is a year a leap year? |
| lubridate::make_difftime |
| Create a difftime object. |
| lubridate::minute |
| Get/set minutes component of a date-time |
| lubridate::month |
| Get/set months component of a date-time |
| lubridate::now |
| The current day and time |
| lubridate::origin |
| 1970-01-01 UTC |
| lubridate::parse_date_time |
| User friendly date-time parsing functions |
| lubridate::period |
| Create or parse period objects |
| lubridate::is.POSIXt |
| Various POSIX utilities |
| lubridate::pretty_dates |
| Computes attractive axis breaks for date-time data |
| lubridate::round_date |
| Round, floor and ceiling methods for date-time objects |
| lubridate::second |
| Get/set seconds component of a date-time |
| lubridate::time_length |
| Compute the exact length of a time span |
| lubridate::timespan |
| Description of time span classes in lubridate |
| lubridate::tz |
| Get/set time zone component of a date-time |
| lubridate::week |
| Get/set weeks component of a date-time |
| lubridate::with_tz |
| Get date-time in a different time zone |
| lubridate::year |
| Get/set years component of a date-time |
| lubridate::ymd |
| Parse dates with *y*ear, *m*onth, and *d*ay components |
| lubridate::ymd_hms |
| Parse date-times with *y*ear, *m*onth, and *d*ay, *h*our, *m*inute, and *s*econd components. |
| maps::area.map |
| Area of projected map regions |
| maps::canada.cities |
| Database of Canadian cities |
| maps::county |
| United States County Map |
| maps::county.fips |
| FIPS county codes for US County Map |
| maps::france |
| France Map |
| maps::identify.map |
| Identify regions on a map |
| maps::iso3166 |
| ISO 3166 country codes (2 or 3 letters) and sovereignty. |
| maps::italy |
| Italy Map |
| maps::lakes |
| World lakes database |
| maps::map |
| Draw Geographical Maps |
| maps::map.axes |
| Draw Axes on Geographical Maps |
| maps::map.cities |
| Add Cities to Existing Map |
| maps::map.scale |
| Add Scale to Existing Unprojected Map |
| maps::map.text |
| Draw a map with labeled regions |
| maps::map.where |
| Locate points on a map |
| maps::match.map |
| Index map regions |
| maps::nz |
| New Zealand Basic Map |
| maps::ozone |
| Sample datasets |
| maps::smooth.map |
| Smooth out aggregated data |
| maps::state |
| United States State Boundaries Map |
| maps::state.carto |
| United States State Population Cartogram Map |
| maps::state.fips |
| FIPS state codes for US 48 State Map |
| maps::state.vbm |
| United States State Visibility Base Map |
| maps::us.cities |
| Database of US cities |
| maps::usa |
| United States Coast Map |
| maps::world |
| Low (mid) resolution World Map |
| maps::world.cities |
| Database of world cities |
| maps::world2 |
| Pacific Centric Low resolution World Map |
| maptools::CCmaps |
| Conditioned choropleth maps |
| maptools::ArcObj2SLDF |
| Converter functions to build SpatialLinesDataFrame objects |
| maptools::GE_SpatialGrid |
| Create SpatialGrid for PNG output to GE |
| maptools::Rgshhs |
| Read GSHHS data into sp object |
| maptools::SpatialLines2PolySet |
| Convert sp line and polygon objects to PBSmapping PolySet objects |
| maptools::SpatialLinesMidPoints |
| Line midpoints |
| maptools::SplashDams |
| Data for Splash Dams in western Oregon |
| maptools::as.SpatialPolygons.tess |
| Coercion of spatstat tess object to sp SpatialPolygons object |
| maptools::as.im.SpatialGridDataFrame |
| Coercion between sp objects and spatstat im objects |
| maptools::as.linnet.SpatialLines |
| Convert SpatialLines to Linear Network |
| maptools::as.owin.SpatialGridDataFrame |
| Coercion between sp objects and spatstat owin objects |
| maptools::as.ppp.SpatialPoints |
| Coercion between sp objects and spatstat ppp objects |
| maptools::as.psp.Line |
| Coercion between sp objects and spatstat psp objects |
| maptools::readAsciiGrid |
| read/write to/from (ESRI) asciigrid format |
| maptools::checkPolygonsHoles |
| Check holes in Polygons objects |
| maptools::dotsInPolys |
| Put dots in polygons |
| maptools::elide-methods |
| Methods for Function elide in Package 'maptools' |
| maptools::gcDestination |
| Find destination in geographical coordinates |
| maptools::getKMLcoordinates |
| Get a list of coordinates out of a KML file |
| maptools::getinfo.shape |
| Get shapefile header information |
| maptools::gzAzimuth |
| Find azimuth for geographical coordinates |
| maptools::gpcholes |
| Hisaji Ono's lake/hole problem |
| maptools::kmlLine |
| Create and write a KML file on the basis of a given Lines object |
| maptools::kmlLines |
| Create and write a KML file on the basis of a given Lines object |
| maptools::kmlOverlay |
| Create and write KML file for PNG image overlay |
| maptools::kmlPoints |
| Create and write a KML file on the basis of a given Points object |
| maptools::kmlPolygon |
| Create and write a KML file on the basis of a given Polygons object |
| maptools::kmlPolygons |
| Create and write a KML file on the basis of a given Polygons object or list of Polygons or SpatialPolygonsDataFrame |
| maptools::leglabs |
| Make legend labels |
| maptools::map2SpatialPolygons |
| Convert map objects to sp classes |
| maptools::nearestPointOnLine |
| Get the nearest point on a line to a given point |
| maptools::nearestPointOnSegment |
| Get the nearest point on a segment to a given point |
| maptools::nowrapRecenter |
| Break polygons at meridian for recentering |
| maptools::nowrapSpatialLines |
| Split SpatialLines components at offset |
| maptools::pal2SpatialPolygons |
| Making SpatialPolygons objects from RArcInfo input |
| maptools::pointLabel |
| Label placement for points to avoid overlaps |
| maptools::ppp-class |
| Virtual class "ppp" |
| maptools::readGPS |
| GPSbabel read interface |
| maptools::readShapeLines |
| Read arc shape files into SpatialLinesDataFrame objects |
| maptools::readShapePoints |
| Read points shape files into SpatialPointsDataFrame objects |
| maptools::readShapePoly |
| Read polygon shape files into SpatialPolygonsDataFrame objects |
| maptools::readShapeSpatial |
| Read shape files into Spatial*DataFrame objects |
| maptools::readSplus |
| Read exported WinBUGS maps |
| maptools::snapPointsToLines |
| Snap a set of points to a set of lines |
| maptools::sp2Mondrian |
| write map data for Mondrian |
| maptools::sp2WB |
| Export SpatialPolygons object as S-Plus map for WinBUGS |
| maptools::sp2tmap |
| Convert SpatialPolygons object for Stata tmap command |
| maptools::spCbind-methods |
| cbind for spatial objects |
| maptools::spRbind-methods |
| rbind for spatial objects |
| maptools::state.vbm |
| US State Visibility Based Map |
| maptools::crepuscule |
| Methods for sun ephemerides calculations |
| maptools::symbolsInPolys |
| Place grids of points over polygons |
| maptools::thinnedSpatialPoly |
| Douglas-Peuker line generalization for Spatial Polygons |
| maptools::unionSpatialPolygons |
| Aggregate Polygons in a SpatialPolygons object |
| maptools::wrld_simpl |
| Simplified world country polygons |
| MatrixModels::Model-class |
| Mother Class "Model" of all S4 Models |
| MatrixModels::glm4 |
| Fitting Generalized Linear Models (using S4) |
| MatrixModels::glpModel-class |
| Class "glpModel" of General Linear Prediction Models |
| MatrixModels::lm.fit.sparse |
| Fitter Function for Sparse Linear Models |
| MatrixModels::mkRespMod |
| Create a respModule object |
| MatrixModels::model.Matrix |
| Construct Possibly Sparse Design or Model Matrices |
| MatrixModels::modelMatrix-class |
| Class "modelMatrix" and SubClasses |
| MatrixModels::predModule-class |
| Class "predModule" and SubClasses |
| MatrixModels::resid,ANY-method |
| Aliases for Model Extractors |
| MatrixModels::respModule-class |
| "respModule" and derived classes |
| MatrixModels::reweightPred |
| Reweight Prediction Module Structure Internals |
| MatrixModels::solveCoef |
| Solve for the Coefficients or Coefficient Increment |
| MatrixModels::updateMu |
| Update 'mu', the Fitted Mean Response |
| MatrixModels::updateWts |
| Update the Residual and X Weights - Generic and Methods |
| matrixStats::allocMatrix |
| Allocates an empty vector, matrix or array |
| matrixStats::anyMissing |
| Checks if there are any missing values in an object or not |
| matrixStats::binCounts |
| Fast element counting in non-overlapping bins |
| matrixStats::binMeans |
| Fast mean calculations in non-overlapping bins |
| matrixStats::diff2 |
| Fast lagged differences |
| matrixStats::indexByRow |
| Translates matrix indices by rows into indices by columns |
| matrixStats::matrixStats-package |
| Package matrixStats |
| matrixStats::mean2 |
| Fast averaging over subset of vector elements |
| matrixStats::rowAlls |
| Checks if a value exists / does not exist in each row (column) of a matrix |
| matrixStats::rowAvgsPerColSet |
| Applies a row-by-row (column-by-column) averaging function to equally-sized subsets of matrix columns (rows) |
| matrixStats::rowCollapse |
| Extracts one cell per row (column) from a matrix |
| matrixStats::rowCounts |
| Counts the number of occurrences of a specific value |
| matrixStats::rowCumsums |
| Cumulative sums, products, minima and maxima for each row (column) in a matrix |
| matrixStats::rowDiffs |
| Calculates difference for each row (column) in a matrix |
| matrixStats::rowIQRs |
| Estimates of the interquartile range for each row (column) in a matrix |
| matrixStats::rowLogSumExps |
| Accurately computes the logarithm of the sum of exponentials across rows or columns |
| matrixStats::rowMeans2 |
| Calculates the mean for each row (column) in a matrix |
| matrixStats::rowMedians |
| Calculates the median for each row (column) in a matrix |
| matrixStats::rowOrderStats |
| Gets an order statistic for each row (column) in a matrix |
| matrixStats::product |
| Calculates the product for each row (column) in a matrix |
| matrixStats::rowQuantiles |
| Estimates quantiles for each row (column) in a matrix |
| matrixStats::rowRanges |
| Gets the range of values in each row (column) of a matrix |
| matrixStats::rowRanks |
| Gets the rank of the elements in each row (column) of a matrix |
| matrixStats::rowMads |
| Standard deviation estimates for each row (column) in a matrix |
| matrixStats::rowSums2 |
| Calculates the sum for each row (column) in a matrix |
| matrixStats::rowTabulates |
| Tabulates the values in a matrix by row (column). |
| matrixStats::rowVars |
| Variance estimates for each row (column) in a matrix |
| matrixStats::rowWeightedMeans |
| Calculates the weighted means for each row (column) in a matrix |
| matrixStats::rowWeightedMedians |
| Calculates the weighted medians for each row (column) in a matrix |
| matrixStats::sum2 |
| Fast sum over subset of vector elements |
| matrixStats::varDiff |
| Estimation of scale based on sequential-order differences |
| matrixStats::weightedMad |
| Weighted Median Absolute Deviation (MAD) |
| matrixStats::weightedMean |
| Weighted Arithmetic Mean |
| matrixStats::weightedMedian |
| Weighted Median Value |
| matrixStats::weightedVar |
| Weighted variance and weighted standard deviation |
| mclust::Baudry_etal_2010_JCGS_examples |
| Simulated Example Datasets From Baudry et al. (2010) |
| mclust::BrierScore |
| Brier score to assess the accuracy of probabilistic predictions |
| mclust::EuroUnemployment |
| Unemployment data for European countries in 2014 |
| mclust::GvHD |
| GvHD Dataset |
| mclust::Mclust |
| Model-Based Clustering |
| mclust::MclustBootstrap |
| Resampling-based Inference for Gaussian finite mixture models |
| mclust::MclustDA |
| MclustDA discriminant analysis |
| mclust::MclustDR |
| Dimension reduction for model-based clustering and classification |
| mclust::MclustDRsubsel |
| Subset selection for GMMDR directions based on BIC |
| mclust::MclustSSC |
| MclustSSC semi-supervised classification |
| mclust::acidity |
| Acidity data |
| mclust::adjustedRandIndex |
| Adjusted Rand Index |
| mclust::banknote |
| Swiss banknotes data |
| mclust::bic |
| BIC for Parameterized Gaussian Mixture Models |
| mclust::cdens |
| Component Density for Parameterized MVN Mixture Models |
| mclust::cdensE |
| Component Density for a Parameterized MVN Mixture Model |
| mclust::cdfMclust |
| Cumulative Distribution and Quantiles for a univariate Gaussian mixture distribution |
| mclust::chevron |
| Simulated minefield data |
| mclust::clPairs |
| Pairwise Scatter Plots showing Classification |
| mclust::classError |
| Classification error |
| mclust::classPriorProbs |
| Estimation of class prior probabilities by EM algorithm |
| mclust::clustCombi |
| Combining Gaussian Mixture Components for Clustering |
| mclust::clustCombiOptim |
| Optimal number of clusters obtained by combining mixture components |
| mclust::combMat |
| Combining Matrix |
| mclust::combiPlot |
| Plot Classifications Corresponding to Successive Combined Solutions |
| mclust::combiTree |
| Tree structure obtained from combining mixture components |
| mclust::coordProj |
| Coordinate projections of multidimensional data modeled by an MVN mixture. |
| mclust::covw |
| Weighted means, covariance and scattering matrices conditioning on a weighted matrix |
| mclust::crimcoords |
| Discriminant coordinates data projection |
| mclust::cross |
| Simulated Cross Data |
| mclust::cvMclustDA |
| MclustDA cross-validation |
| mclust::decomp2sigma |
| Convert mixture component covariances to matrix form |
| mclust::defaultPrior |
| Default conjugate prior for Gaussian mixtures |
| mclust::dens |
| Density for Parameterized MVN Mixtures |
| mclust::densityMclust |
| Density Estimation via Model-Based Clustering |
| mclust::densityMclust.diagnostic |
| Diagnostic plots for 'mclustDensity' estimation |
| mclust::diabetes |
| Diabetes Data (flawed) |
| mclust::dupPartition |
| Partition the data by grouping together duplicated data |
| mclust::em |
| EM algorithm starting with E-step for parameterized Gaussian mixture models |
| mclust::emControl |
| Set control values for use with the EM algorithm |
| mclust::emE |
| EM algorithm starting with E-step for a parameterized Gaussian mixture model |
| mclust::entPlot |
| Plot Entropy Plots |
| mclust::estep |
| E-step for parameterized Gaussian mixture models. |
| mclust::estepE |
| E-step in the EM algorithm for a parameterized Gaussian mixture model. |
| mclust::gmmhd |
| Identifying Connected Components in Gaussian Finite Mixture Models for Clustering |
| mclust::hc |
| Model-based Agglomerative Hierarchical Clustering |
| mclust::hcE |
| Model-based Hierarchical Clustering |
| mclust::hcRandomPairs |
| Random hierarchical structure |
| mclust::hclass |
| Classifications from Hierarchical Agglomeration |
| mclust::hdrlevels |
| Highest Density Region (HDR) Levels |
| mclust::hypvol |
| Aproximate Hypervolume for Multivariate Data |
| mclust::icl |
| ICL for an estimated Gaussian Mixture Model |
| mclust::imputeData |
| Missing data imputation via the 'mix' package |
| mclust::imputePairs |
| Pairwise Scatter Plots showing Missing Data Imputations |
| mclust::logLik.Mclust |
| Log-Likelihood of a 'Mclust' object |
| mclust::logLik.MclustDA |
| Log-Likelihood of a 'MclustDA' object |
| mclust::map |
| Classification given Probabilities |
| mclust::mapClass |
| Correspondence between classifications |
| mclust::mclust-package |
| Gaussian Mixture Modelling for Model-Based Clustering, Classification, and Density Estimation |
| mclust::mclust.options |
| Default values for use with MCLUST package |
| mclust::mclust1Dplot |
| Plot one-dimensional data modeled by an MVN mixture. |
| mclust::mclust2Dplot |
| Plot two-dimensional data modelled by an MVN mixture |
| mclust::mclustBIC |
| BIC for Model-Based Clustering |
| mclust::mclustBICupdate |
| Update BIC values for parameterized Gaussian mixture models |
| mclust::mclustBootstrapLRT |
| Bootstrap Likelihood Ratio Test for the Number of Mixture Components |
| mclust::mclustICL |
| ICL Criterion for Model-Based Clustering |
| mclust::mclustLoglik |
| Log-likelihood from a table of BIC values for parameterized Gaussian mixture models |
| mclust::mclustModel |
| Best model based on BIC |
| mclust::mclustModelNames |
| MCLUST Model Names |
| mclust::mclustVariance |
| Template for variance specification for parameterized Gaussian mixture models |
| mclust::me |
| EM algorithm starting with M-step for parameterized MVN mixture models |
| mclust::meE |
| EM algorithm starting with M-step for a parameterized Gaussian mixture model |
| mclust::mstep |
| M-step for parameterized Gaussian mixture models |
| mclust::mstepE |
| M-step for a parameterized Gaussian mixture model |
| mclust::mvn |
| Univariate or Multivariate Normal Fit |
| mclust::mvnX |
| Univariate or Multivariate Normal Fit |
| mclust::nMclustParams |
| Number of Estimated Parameters in Gaussian Mixture Models |
| mclust::nVarParams |
| Number of Variance Parameters in Gaussian Mixture Models |
| mclust::partconv |
| Numeric Encoding of a Partitioning |
| mclust::partuniq |
| Classifies Data According to Unique Observations |
| mclust::plot.Mclust |
| Plotting method for Mclust model-based clustering |
| mclust::plot.MclustBootstrap |
| Plot of bootstrap distributions for mixture model parameters |
| mclust::plot.MclustDA |
| Plotting method for MclustDA discriminant analysis |
| mclust::plot.MclustDR |
| Plotting method for dimension reduction for model-based clustering and classification |
| mclust::plot.MclustSSC |
| Plotting method for MclustSSC semi-supervised classification |
| mclust::plot.clustCombi |
| Plot Combined Clusterings Results |
| mclust::plot.densityMclust |
| Plots for Mixture-Based Density Estimate |
| mclust::plot.hc |
| Dendrograms for Model-based Agglomerative Hierarchical Clustering |
| mclust::plot.mclustBIC |
| BIC Plot for Model-Based Clustering |
| mclust::plot.mclustICL |
| ICL Plot for Model-Based Clustering |
| mclust::predict.Mclust |
| Cluster multivariate observations by Gaussian finite mixture modeling |
| mclust::predict.MclustDA |
| Classify multivariate observations by Gaussian finite mixture modeling |
| mclust::predict.MclustDR |
| Classify multivariate observations on a dimension reduced subspace by Gaussian finite mixture modeling |
| mclust::predict.MclustSSC |
| Classification of multivariate observations by semi-supervised Gaussian finite mixtures |
| mclust::predict.densityMclust |
| Density estimate of multivariate observations by Gaussian finite mixture modeling |
| mclust::priorControl |
| Conjugate Prior for Gaussian Mixtures. |
| mclust::randProj |
| Random projections of multidimensional data modeled by an MVN mixture |
| mclust::sigma2decomp |
| Convert mixture component covariances to decomposition form. |
| mclust::sim |
| Simulate from Parameterized MVN Mixture Models |
| mclust::simE |
| Simulate from a Parameterized MVN Mixture Model |
| mclust::summary.Mclust |
| Summarizing Gaussian Finite Mixture Model Fits |
| mclust::summary.MclustBootstrap |
| Summary Function for Bootstrap Inference for Gaussian Finite Mixture Models |
| mclust::summary.MclustDA |
| Summarizing discriminant analysis based on Gaussian finite mixture modeling |
| mclust::summary.MclustSSC |
| Summarizing semi-supervised classification model based on Gaussian finite mixtures |
| mclust::summary.mclustBIC |
| Summary function for model-based clustering via BIC |
| mclust::surfacePlot |
| Density or uncertainty surface for bivariate mixtures |
| mclust::thyroid |
| UCI Thyroid Gland Data |
| mclust::uncerPlot |
| Uncertainty Plot for Model-Based Clustering |
| mclust::unmap |
| Indicator Variables given Classification |
| mclust::wdbc |
| UCI Wisconsin Diagnostic Breast Cancer Data |
| mclust::wreath |
| Data Simulated from a 14-Component Mixture |
| minqa::bobyqa |
| An R interface to the bobyqa implementation of Powell |
| minqa::newuoa |
| An R interface to the NEWUOA implementation of Powell |
| minqa::uobyqa |
| An R interface to the uobyqa implementation of Powell |
| mitools::MIcombine |
| Multiple imputation inference |
| mitools::MIextract |
| Extract a parameter from a list of results |
| mitools::imputationList |
| Constructor for imputationList objects |
| mitools::pisamaths |
| Maths Performance Data from the PISA 2012 survey in New Zealand |
| mitools::smi |
| Multiple imputations |
| mitools::with.imputationList |
| Evaluate an expression in multiple imputed datasets |
| multcomp::adevent |
| Adverse Events Data |
| multcomp::cftest |
| Testing Estimated Coefficients |
| multcomp::cholesterol |
| Cholesterol Reduction Data Set |
| multcomp::cml |
| Chronic Myelogenous Leukemia survival data. |
| multcomp::contrMat |
| Contrast Matrices |
| multcomp::detergent |
| Detergent Durability Data Set |
| multcomp::fattyacid |
| Fatty Acid Content of Bacillus simplex. |
| multcomp::glht |
| General Linear Hypotheses |
| multcomp::litter |
| Litter Weights Data Set |
| multcomp::summary.glht |
| Methods for General Linear Hypotheses |
| multcomp::mmm |
| Simultaneous Inference for Multiple Marginal Models |
| multcomp::modelparm |
| Generic Accessor Function for Model Parameters |
| multcomp::mtept |
| Multiple Endpoints Data |
| multcomp::parm |
| Model Parameters |
| multcomp::plot.cld |
| Plot a cld object |
| multcomp::recovery |
| Recovery Time Data Set |
| multcomp::sbp |
| Systolic Blood Pressure Data |
| multcomp::trees513 |
| Frankonian Tree Damage Data |
| multcomp::waste |
| Industrial Waste Data Set |
| mvtnorm::dmvnorm |
| Multivariate Normal Density and Random Deviates |
| mvtnorm::dmvt |
| The Multivariate t Distribution |
| mvtnorm::GenzBretz |
| Choice of Algorithm and Hyper Parameters |
| mvtnorm::pmvnorm |
| Multivariate Normal Distribution |
| mvtnorm::pmvt |
| Multivariate t Distribution |
| mvtnorm::qmvnorm |
| Quantiles of the Multivariate Normal Distribution |
| mvtnorm::qmvt |
| Quantiles of the Multivariate t Distribution |
| nloptr::check.derivatives |
| Check analytic gradients of a function using finite difference approximations |
| nloptr::is.nloptr |
| R interface to NLopt |
| nloptr::nloptr-package |
| R interface to NLopt |
| nloptr::nloptr |
| R interface to NLopt |
| nloptr::nloptr.get.default.options |
| Return a data.frame with all the options that can be supplied to nloptr. |
| nloptr::nloptr.print.options |
| Print description of nloptr options |
| nloptr::print.nloptr |
| Print results after running nloptr |
| NLP::parse_IETF_language_tag |
| Parse IETF Language Tag |
| numDeriv::00.numDeriv.Intro |
| Accurate Numerical Derivatives |
| numDeriv::genD |
| Generate Bates and Watts D Matrix |
| numDeriv::grad |
| Numerical Gradient of a Function |
| numDeriv::hessian |
| Calculate Hessian Matrix |
| numDeriv::jacobian |
| Gradient of a Vector Valued Function |
| numDeriv::numDeriv-package |
| Accurate Numerical Derivatives |
| od::od_data_buildings |
| Simple buildings dataset |
| od::od_data_centroids |
| Datasets reporesenting zone centroids |
| od::od_data_centroids2 |
| Output area centroids |
| od::od_data_destinations |
| Workplace zone (destination) centroids |
| od::od_data_df |
| Origin-destination datasets |
| od::od_data_df2 |
| Origin-destination data with destinations in a different layer than origins |
| od::od_data_network |
| Route network data for Leeds |
| od::od_data_zones |
| Example OD data |
| od::od_data_zones_small |
| Small zones dataset |
| od::od_id |
| Combine two ID values to create a single ID number |
| od::od_road_network |
| Simple road network dataset |
| od::od_to_odmatrix |
| Convert origin-destination data from long to wide format |
| od::odmatrix_to_od |
| Convert origin-destination data from wide to long format |
| pbapply::pbapply |
| Adding Progress Bar to '*apply' Functions |
| pbapply::pboptions |
| Creating Progress Bar and Setting Options |
| pbapply::splitpb |
| Divide Tasks for Progress-bar Friendly Distribution in a Cluster |
| pbapply::timerProgressBar |
| Timer Progress Bar |
| pbkrtest::data-beets |
| Sugar beets data |
| pbkrtest::data-budworm |
| budworm data |
| pbkrtest::get_ddf_Lb |
| Adjusted denomintor degress freedom for linear estimate for linear mixed model. |
| pbkrtest::getkr |
| Extract (or "get") components from a 'KRmodcomp' object. |
| pbkrtest::kr-modcomp |
| F-test and degrees of freedom based on Kenward-Roger approximation |
| pbkrtest::kr-vcov |
| Ajusted covariance matrix for linear mixed models according to Kenward and Roger |
| pbkrtest::model-coerce |
| Conversion between a model object and a restriction matrix |
| pbkrtest::pb-modcomp |
| Model comparison using parametric bootstrap methods. |
| pbkrtest::pb-refdist |
| Calculate reference distribution using parametric bootstrap |
| pbkrtest::sat-modcomp |
| F-test and degrees of freedom based on Satterthwaite approximation |
| pillar::pillar_options |
| Package options |
| pkgbuild::compiler_flags |
| Default compiler flags used by devtools. |
| pkgbuild::with_debug |
| Temporarily set debugging compilation flags. |
| pkgload::dev_example |
| Run a examples for an in-development function. |
| pkgload::load_all |
| Load complete package |
| pkgload::load_code |
| Load R code. |
| pkgload::load_data |
| Load data. |
| pkgload::load_dll |
| Load a compiled DLL |
| plotly::hobbs |
| Hobbs data |
| plotly::mic |
| Mic data |
| plotly::res_mn |
| Minnesotan Indian Reservation Lands |
| plotly::wind |
| Wind data |
| plyr::a_ply |
| Split array, apply function, and discard results. |
| plyr::aaply |
| Split array, apply function, and return results in an array. |
| plyr::adply |
| Split array, apply function, and return results in a data frame. |
| plyr::alply |
| Split array, apply function, and return results in a list. |
| plyr::arrange |
| Order a data frame by its colums. |
| plyr::as.data.frame.function |
| Make a function return a data frame. |
| plyr::baseball |
| Yearly batting records for all major league baseball players |
| plyr::compact |
| Compact list. |
| plyr::count |
| Count the number of occurences. |
| plyr::create_progress_bar |
| Create progress bar. |
| plyr::d_ply |
| Split data frame, apply function, and discard results. |
| plyr::daply |
| Split data frame, apply function, and return results in an array. |
| plyr::ddply |
| Split data frame, apply function, and return results in a data frame. |
| plyr::defaults |
| Set defaults. |
| plyr::desc |
| Descending order. |
| plyr::dlply |
| Split data frame, apply function, and return results in a list. |
| plyr::each |
| Aggregate multiple functions into a single function. |
| plyr::failwith |
| Fail with specified value. |
| plyr::idata.frame |
| Construct an immutable data frame. |
| plyr::join |
| Join two data frames together. |
| plyr::l_ply |
| Split list, apply function, and discard results. |
| plyr::laply |
| Split list, apply function, and return results in an array. |
| plyr::ldply |
| Split list, apply function, and return results in a data frame. |
| plyr::liply |
| Experimental iterator based version of llply. |
| plyr::list_to_array |
| List to array. |
| plyr::list_to_dataframe |
| List to data frame. |
| plyr::list_to_vector |
| List to vector. |
| plyr::llply |
| Split list, apply function, and return results in a list. |
| plyr::loop_apply |
| Loop apply |
| plyr::m_ply |
| Call function with arguments in array or data frame, discarding results. |
| plyr::maply |
| Call function with arguments in array or data frame, returning an array. |
| plyr::mdply |
| Call function with arguments in array or data frame, returning a data frame. |
| plyr::mlply |
| Call function with arguments in array or data frame, returning a list. |
| plyr::name_rows |
| Toggle row names between explicit and implicit. |
| plyr::ozone |
| Monthly ozone measurements over Central America. |
| plyr::progress_none |
| Null progress bar |
| plyr::progress_text |
| Text progress bar. |
| plyr::progress_time |
| Text progress bar with time. |
| plyr::progress_tk |
| Graphical progress bar, powered by Tk. |
| plyr::progress_win |
| Graphical progress bar, powered by Windows. |
| plyr::r_ply |
| Replicate expression and discard results. |
| plyr::raply |
| Replicate expression and return results in a array. |
| plyr::rbind.fill |
| Combine data.frames by row, filling in missing columns. |
| plyr::rbind.fill.matrix |
| Bind matrices by row, and fill missing columns with NA. |
| plyr::rdply |
| Replicate expression and return results in a data frame. |
| plyr::rlply |
| Replicate expression and return results in a list. |
| plyr::round_any |
| Round to multiple of any number. |
| plyr::split_indices |
| Split indices. |
| plyr::splitter_a |
| Split an array by .margins. |
| plyr::splitter_d |
| Split a data frame by variables. |
| plyr::summarise |
| Summarise a data frame. |
| plyr::take |
| Take a subset along an arbitrary dimension |
| praise::praise_parts |
| Parts of speech for praising |
| prettyunits::pretty_dt |
| Pretty formatting of time intervals (difftime objects) |
| prettyunits::pretty_ms |
| Pretty formatting of milliseconds |
| prettyunits::pretty_sec |
| Pretty formatting of seconds |
| productplots::colour_level |
| For ggplot2: colour by weight. |
| productplots::colour_weight |
| For ggplot2: colour by weight. |
| productplots::happy |
| Data related to happiness from the general social survey. |
| proxy::dist |
| Matrix Distance/Similarity Computation |
| proxy::pr_DB |
| Registry of proximities |
| proxy::rowSums.dist |
| Row Sums/Means of Sparse Symmetric Matrices |
| pryr::ftype |
| Determine function type. |
| pryr::sexp_type |
| Inspect internal attributes of R objects. |
| pryr::is_promise |
| Promise info |
| pryr::otype |
| Determine object type. |
| pryr::uneval |
| Capture the call associated with a promise. |
| ps::ps_children |
| List of child processes (process objects) of the process. Note that this typically requires enumerating all processes on the system, so it is a costly operation. |
| ps::ps_cmdline |
| Command line of the process |
| ps::ps_connections |
| List network connections of a process |
| ps::ps_cpu_times |
| CPU times of the process |
| ps::ps_create_time |
| Start time of a process |
| ps::ps_cwd |
| Process current working directory as an absolute path. |
| ps::ps_descent |
| Query the ancestry of a process |
| ps::ps_disk_partitions |
| List all mounted partitions |
| ps::ps_disk_usage |
| Disk usage statistics, per partition |
| ps::ps_environ |
| Environment variables of a process |
| ps::ps_exe |
| Full path of the executable of a process |
| ps::ps_handle |
| Create a process handle |
| ps::ps_interrupt |
| Interrupt a process |
| ps::ps_is_running |
| Checks whether a process is running |
| ps::ps_kill |
| Kill a process |
| ps::ps_memory_info |
| Memory usage information |
| ps::ps_name |
| Process name |
| ps::ps_num_fds |
| Number of open file descriptors |
| ps::ps_num_threads |
| Number of threads |
| ps::ps_open_files |
| Open files of a process |
| ps::ps_pid |
| Pid of a process handle |
| ps::ps_ppid |
| Parent pid or parent process of a process |
| ps::ps_resume |
| Resume (continue) a stopped process |
| ps::ps_send_signal |
| Send signal to a process |
| ps::ps_shared_lib_users |
| List all processes that loaded a shared library |
| ps::ps_shared_libs |
| List the dynamically loaded libraries of a process |
| ps::ps_status |
| Current process status |
| ps::ps_suspend |
| Suspend (stop) the process |
| ps::ps_system_memory |
| Statistics about system memory usage |
| ps::ps_system_swap |
| System swap memory statistics |
| ps::ps_terminal |
| Terminal device of the process |
| ps::ps_terminate |
| Terminate a Unix process |
| ps::ps_uids |
| User ids and group ids of the process |
| ps::ps_username |
| Owner of the process |
| purrr::imap |
| Apply a function to each element of a vector, and its index |
| purrr::invoke |
| Invoke functions. |
| purrr::lmap |
| Apply a function to list-elements of a list |
| purrr::map |
| Apply a function to each element of a list or atomic vector |
| purrr::map2 |
| Map over multiple inputs simultaneously. |
| purrr::map_if |
| Apply a function to each element of a vector conditionally |
| purrr::modify |
| Modify elements selectively |
| quantreg::Bosco |
| Boscovich Data |
| quantreg::CobarOre |
| Cobar Ore data |
| quantreg::FAQ |
| FAQ and ChangeLog of a package |
| quantreg::KhmaladzeTest |
| Tests of Location and Location Scale Shift Hypotheses for Linear Models |
| quantreg::Mammals |
| Garland(1983) Data on Running Speed of Mammals |
| quantreg::MelTemp |
| Daily maximum temperatures in Melbourne, Australia |
| quantreg::Munge |
| Munge rqss formula |
| quantreg::ParetoTest |
| Estimation and Inference on the Pareto Tail Exponent for Linear Models |
| quantreg::Peirce |
| C.S. Peirce's Auditory Response Data |
| quantreg::QTECox |
| Function to obtain QTE from a Cox model |
| quantreg::akj |
| Density Estimation using Adaptive Kernel method |
| quantreg::anova.rq |
| Anova function for quantile regression fits |
| quantreg::bandwidth.rq |
| bandwidth selection for rq functions |
| quantreg::barro |
| Barro Data |
| quantreg::boot.crq |
| Bootstrapping Censored Quantile Regression |
| quantreg::boot.rq |
| Bootstrapping Quantile Regression |
| quantreg::boot.rq.pwxy |
| Preprocessing weighted bootstrap method |
| quantreg::boot.rq.pxy |
| Preprocessing bootstrap method |
| quantreg::combos |
| Ordered Combinations |
| quantreg::critval |
| Hotelling Critical Values |
| quantreg::crq |
| Functions to fit censored quantile regression models |
| quantreg::dither |
| Function to randomly perturb a vector |
| quantreg::dynrq |
| Dynamic Linear Quantile Regression |
| quantreg::engel |
| Engel Data |
| quantreg::gasprice |
| Time Series of US Gasoline Prices |
| quantreg::kuantile |
| Quicker Sample Quantiles |
| quantreg::latex |
| Make a latex version of an R object |
| quantreg::latex.summary.rqs |
| Make a latex table from a table of rq results |
| quantreg::latex.table |
| Writes a latex formatted table to a file |
| quantreg::lm.fit.recursive |
| Recursive Least Squares |
| quantreg::lprq |
| locally polynomial quantile regression |
| quantreg::nlrq |
| Function to compute nonlinear quantile regression estimates |
| quantreg::nlrq.control |
| Set control parameters for nlrq |
| quantreg::plot.KhmaladzeTest |
| Plot a KhmaladzeTest object |
| quantreg::plot.rq.process |
| plot the coordinates of the quantile regression process |
| quantreg::plot.rqs |
| Visualizing sequences of quantile regressions |
| quantreg::plot.rqss |
| Plot Method for rqss Objects |
| quantreg::plot.summary.rqs |
| Visualizing sequences of quantile regression summaries |
| quantreg::predict.rq |
| Quantile Regression Prediction |
| quantreg::predict.rqss |
| Predict from fitted nonparametric quantile regression smoothing spline models |
| quantreg::print.KhmaladzeTest |
| Print a KhmaladzeTest object |
| quantreg::print.rq |
| Print an rq object |
| quantreg::print.summary.rq |
| Print Quantile Regression Summary Object |
| quantreg::q489 |
| Even Quicker Sample Quantiles |
| quantreg::qrisk |
| Function to compute Choquet portfolio weights |
| quantreg::qss |
| Additive Nonparametric Terms for rqss Fitting |
| quantreg::ranks |
| Quantile Regression Ranks |
| quantreg::rearrange |
| Rearrangement |
| quantreg::residuals.nlrq |
| Return residuals of an nlrq object |
| quantreg::rq |
| Quantile Regression |
| quantreg::rq.fit |
| Function to choose method for Quantile Regression |
| quantreg::rq.fit.br |
| Quantile Regression Fitting by Exterior Point Methods |
| quantreg::rq.fit.conquer |
| Optional Fitting Method for Quantile Regression |
| quantreg::rq.fit.fnb |
| Quantile Regression Fitting via Interior Point Methods |
| quantreg::rq.fit.fnc |
| Quantile Regression Fitting via Interior Point Methods |
| quantreg::rq.fit.hogg |
| weighted quantile regression fitting |
| quantreg::rq.fit.lasso |
| Lasso Penalized Quantile Regression |
| quantreg::rq.fit.pfn |
| Preprocessing Algorithm for Quantile Regression |
| quantreg::rq.fit.pfnb |
| Quantile Regression Fitting via Interior Point Methods |
| quantreg::rq.fit.ppro |
| Preprocessing fitting method for QR |
| quantreg::rq.fit.qfnb |
| Quantile Regression Fitting via Interior Point Methods |
| quantreg::rq.fit.scad |
| SCADPenalized Quantile Regression |
| quantreg::rq.fit.sfn |
| Sparse Regression Quantile Fitting |
| quantreg::rq.fit.sfnc |
| Sparse Constrained Regression Quantile Fitting |
| quantreg::rq.object |
| Linear Quantile Regression Object |
| quantreg::rq.process.object |
| Linear Quantile Regression Process Object |
| quantreg::rq.wfit |
| Function to choose method for Weighted Quantile Regression |
| quantreg::rqProcess |
| Compute Standardized Quantile Regression Process |
| quantreg::rqs.fit |
| Function to fit multiple response quantile regression models |
| quantreg::rqss |
| Additive Quantile Regression Smoothing |
| quantreg::rqss.object |
| RQSS Objects and Summarization Thereof |
| quantreg::sfn.control |
| Set Control Parameters for Sparse Fitting |
| quantreg::srisk |
| Markowitz (Mean-Variance) Portfolio Optimization |
| quantreg::summary.crqs |
| Summary methods for Censored Quantile Regression |
| quantreg::summary.rq |
| Summary methods for Quantile Regression |
| quantreg::summary.rqss |
| Summary of rqss fit |
| quantreg::table.rq |
| Table of Quantile Regression Results |
| quantreg::uis |
| UIS Drug Treatment study data |
| R.cache::Non-documented objects |
| Non-documented objects |
| R.cache::Options used by R.cache |
| Options used by R.cache |
| R.cache::R.cache-package |
| Package R.cache |
| R.cache::addMemoization.default |
| Creates a copy of an existing function such that its results are memoized |
| R.cache::clearCache.default |
| Removes all files in a cache file directory |
| R.cache::evalWithMemoization |
| Evaluates an R expression with memoization |
| R.cache::findCache.default |
| Locates a cache file |
| R.cache::generateCache.default |
| Generates a cache pathname from a key object |
| R.cache::getCachePath.default |
| Gets the path to the file cache directory |
| R.cache::getCacheRootPath.default |
| Gets the root path to the file cache directory |
| R.cache::getChecksum.default |
| Generates a deterministic checksum for an R object |
| R.cache::loadCache.default |
| Loads data from file cache |
| R.cache::memoizedCall.default |
| Calls a function with memoization |
| R.cache::readCacheHeader.default |
| Loads data from file cache |
| R.cache::saveCache.default |
| Saves data to file cache |
| R.cache::setCachePath.default |
| Sets the path to the file cache directory |
| R.cache::setCacheRootPath.default |
| Sets the root path to the file cache directory |
| R.cache::setupCacheRootPath.default |
| Interactively offers the user to set up the default root path |
| R.methodsS3::Non-documented objects |
| Non-documented objects |
| R.methodsS3::R.KEYWORDS |
| Reserved words in R not to be used for object names |
| R.methodsS3::R.methodsS3-package |
| Package R.methodsS3 |
| R.methodsS3::findDispatchMethodsS3.default |
| Finds the S3 methods that a generic function would call |
| R.methodsS3::getDispatchMethodS3.default |
| Gets the S3 method that a generic function would call |
| R.methodsS3::getGenericS3.default |
| Gets an S3 generic function |
| R.methodsS3::getMethodS3.default |
| Gets an S3 method |
| R.methodsS3::isGenericS3.default |
| Checks if a function is a S3 generic function |
| R.methodsS3::isGenericS4.default |
| Checks if a function is a S4 generic function |
| R.methodsS3::setGenericS3.default |
| Creates an S3 generic function |
| R.methodsS3::setMethodS3.default |
| Creates an S3 method |
| R.methodsS3::throw.default |
| Throws an exception |
| R.oo::ASCII |
| 8-bit ASCII table |
| R.oo::BasicObject |
| A root class like Object but without references |
| R.oo::Class |
| The Class class describes an Object class |
| R.oo::$.BasicObject |
| Makes the fields and methods of an BasicObject accessible via the $ and the [[ operator |
| R.oo::$.Class |
| Makes the fields and methods of an Class accessible via the $ and the [[ operator |
| R.oo::$.Object |
| Makes the fields and methods of an Object accessible via the $ and the [[ operator |
| R.oo::$<-.BasicObject |
| Makes the fields and methods of an BasicObject assignable via the $<- and the [[<- operator |
| R.oo::$<-.Class |
| Makes the fields and methods of an Class assignable via the $<- and the [[<- operator |
| R.oo::$<-.Object |
| Makes the fields and methods of an Object assignable via the $<- and the [[<- operator |
| R.oo::Exception |
| The Exception class to be thrown and caught |
| R.oo::Interface |
| The Interface class |
| R.oo::InternalErrorException |
| InternalErrorException represents internal errors |
| R.oo::Non-documented objects |
| Non-documented objects |
| R.oo::Object |
| The root class that every class must inherit from |
| R.oo::Package |
| The Package class provides methods for accessing package information |
| R.oo::R.oo-package |
| Package R.oo |
| R.oo::RccViolationException |
| An RccViolationException indicates a violation of the R Coding Conventions (RCC) |
| R.oo::Rdoc |
| Class for converting Rdoc comments to Rd files |
| R.oo::RdocException |
| RdocException are thrown by the Rdoc compiler |
| R.oo::abort.default |
| Aborts the current expression call |
| R.oo::Class$argsToString |
| Gets the arguments of a function as a character string |
| R.oo::Rdoc$argsToString |
| Gets the arguments signature of a function |
| R.oo::as.character.BasicObject |
| Gets a character string representing the object |
| R.oo::as.character.Class |
| Returns a short string describing the class |
| R.oo::as.character.Exception |
| Gets a character string representing of the Exception |
| R.oo::as.character.Interface |
| Gets a character string representing the Interface |
| R.oo::as.character.Object |
| Gets a character string representing the object |
| R.oo::as.character.Package |
| Gets a string representation of this package |
| R.oo::as.character.RccViolationException |
| Gets a string representing of the RCC violation |
| R.oo::as.character.RdocException |
| Gets a character string representing of the RdocException |
| R.oo::attach.BasicObject |
| Attach an BasicObject to the R search path |
| R.oo::attach.Object |
| Attaches an Object to the R search path |
| R.oo::attachLocally.Object |
| Attaches an Object locally to an environment |
| R.oo::charToInt.default |
| Converts a vector of ASCII characters into a vector of integers |
| R.oo::check.Rdoc |
| Checks the compiled Rd files |
| R.oo::clearCache.Object |
| Clear fields that are defined to have cached values |
| R.oo::clearLookupCache.Object |
| Clear internal fields used for faster lookup |
| R.oo::clone.Object |
| Clones an Object |
| R.oo::Rdoc$compile |
| Compile source code files containing Rdoc comments into Rd files |
| R.oo::compileRdoc |
| Compiles the Rdoc help comments in a package |
| R.oo::Rdoc$createManPath |
| Creates the directory where the Rd files should be saved |
| R.oo::Rdoc$createName |
| Creates a class-method name |
| R.oo::Rdoc$declaration |
| Gets the class declaration |
| R.oo::detach.BasicObject |
| Detach an BasicObject from the R search path |
| R.oo::detach.Object |
| Detach an Object from the R search path |
| R.oo::dimension.default |
| Gets the dimension of the object |
| R.oo::equals.BasicObject |
| Compares an object with another |
| R.oo::equals.Object |
| Compares an object with another |
| R.oo::equals.default |
| Compares an object with another |
| R.oo::Rdoc$escapeRdFilename |
| Escape non-valid characters in a filename |
| R.oo::extend.BasicObject |
| Extends another class |
| R.oo::extend.Interface |
| Extends another Interface class |
| R.oo::extend.Object |
| Extends another class |
| R.oo::extend.default |
| Extends a object |
| R.oo::finalize.Object |
| Finalizer methods called when object is clean out |
| R.oo::Class$forName |
| Gets a Class object by a name of a class |
| R.oo::getAuthor.Package |
| Gets the Author of this package |
| R.oo::getBundle.Package |
| Gets the Bundle that this package might belong to |
| R.oo::getBundlePackages.Package |
| Gets the names of the other packages that is in the same bundle as this package |
| R.oo::getCalls.Exception |
| Gets the active calls saved when the exception was created |
| R.oo::getChangeLog.Package |
| Gets the change log of this package |
| R.oo::Rdoc$getClassS4Usage |
| Gets the usage of a S4 class |
| R.oo::getClasses.Package |
| Gets all classes of a package |
| R.oo::getConstructorS3.default |
| Get a constructor method |
| R.oo::getContents.Package |
| Gets the contents of this package |
| R.oo::getContribUrl.Package |
| Gets the URL(s) from where this package can be installed |
| R.oo::getDataPath.Package |
| Gets the path to the data (data/) directory of this package |
| R.oo::getDate.Package |
| Gets the date when package was build |
| R.oo::getDescription.Package |
| Gets the description of the package |
| R.oo::getDescriptionFile.Package |
| Gets the description file of this package |
| R.oo::getDetails.Class |
| Lists the fields and methods of a class |
| R.oo::getDevelUrl.Package |
| Gets the URL(s) from where the developers version of this package can be installed |
| R.oo::getDocPath.Package |
| Gets the path to the accompanying documentation (doc/) directory of this package |
| R.oo::getEnvironment.Object |
| Gets the environment of this object |
| R.oo::getEnvironment.Package |
| Gets the environment of a loaded package |
| R.oo::getExamplePath.Package |
| Gets the path to the example (R-ex/) directory of this package |
| R.oo::getFieldModifiers.Object |
| Gets all types of field modifiers |
| R.oo::getFields.BasicObject |
| Returns the field names of an BasicObject |
| R.oo::getFields.Class |
| Returns the field names of a class |
| R.oo::getFields.Interface |
| Returns NULL |
| R.oo::getFields.Object |
| Returns the field names of an Object |
| R.oo::getHowToCite.Package |
| Gets the citation of this package |
| R.oo::getInstantiationTime.BasicObject |
| Gets the time when the object was instantiated |
| R.oo::getInstantiationTime.Object |
| Gets the time when the object was instantiated |
| R.oo::getInternalAddress.Object |
| Gets the memory location where the Object resides |
| R.oo::Rdoc$getKeywords |
| Gets the keywords defined in R with descriptions |
| R.oo::getKnownSubclasses.Class |
| Gets all subclasses that are currently loaded |
| R.oo::getKnownSubclasses.classRepresentation |
| Gets the known subclasses |
| R.oo::Exception$getLastException |
| Static method to get the last Exception thrown |
| R.oo::getLicense.Package |
| Gets the License of this package |
| R.oo::getMaintainer.Package |
| Gets the Maintainer of this package |
| R.oo::Rdoc$getManPath |
| Gets the path to the directory where the Rd files will be saved |
| R.oo::getMessage.Exception |
| Gets the message of the Exception |
| R.oo::getMessage.InternalErrorException |
| Gets the message of the exception |
| R.oo::getMethods.Class |
| Returns the method names of class and its super classes |
| R.oo::getName.Class |
| Gets the name of the class |
| R.oo::getName.Package |
| Gets the name of this package |
| R.oo::getName.environment |
| Gets the name of an environment |
| R.oo::Rdoc$getNameFormat |
| Gets the current name format |
| R.oo::getPackage.Class |
| Gets the package to which the class belongs |
| R.oo::getPackage.InternalErrorException |
| Gets the suspicious package likely to contain an error |
| R.oo::Rdoc$getPackageNameOf |
| Gets the package of a method or an object |
| R.oo::getPath.Package |
| Gets the library (system) path to this package |
| R.oo::getPosition.Package |
| Gets the search path position of the package |
| R.oo::RccViolationException$getRccUrl |
| Static method to get a URL where the RCC can be found |
| R.oo::getRdDeclaration.Class |
| Gets the class declaration in Rd format |
| R.oo::getRdDeclaration.classRepresentation |
| Gets the class declaration in Rd format |
| R.oo::getRdHierarchy.Class |
| Gets the class hierarchy in Rd format |
| R.oo::getRdHierarchy.classRepresentation |
| Gets the class hierarchy in Rd format |
| R.oo::getRdMethods.Class |
| Gets the methods of a class in Rd format |
| R.oo::getRdMethods.classRepresentation |
| Gets the methods in Rd format |
| R.oo::Rdoc$getRdTitle |
| Extracts the title string of a Rd file |
| R.oo::getSource.RdocException |
| Gets the source of the exception |
| R.oo::getStackTrace.Exception |
| Gets the stack trace saved when the exception was created |
| R.oo::getStackTraceString.Exception |
| Gets the stack trace as a string |
| R.oo::getStaticInstance.Class |
| Gets the static instance of this class |
| R.oo::getStaticInstance.Object |
| Gets the static instance of this objects class |
| R.oo::getSuperclasses.Class |
| Gets the super classes of this class |
| R.oo::getSuperclasses.classRepresentation |
| Gets the superclasses |
| R.oo::getTitle.Package |
| Gets the Title of this package |
| R.oo::getUrl.Package |
| Gets the URL of this package |
| R.oo::Rdoc$getUsage |
| Gets the usage of a method |
| R.oo::getVersion.Package |
| Gets the version of this package |
| R.oo::getWhen.Exception |
| Gets the time when the Exception was created |
| R.oo::hasField.BasicObject |
| Checks if a field exists or not |
| R.oo::hasField.Object |
| Checks if a field exists or not |
| R.oo::hashCode.BasicObject |
| Gets a hash code for the object |
| R.oo::hashCode.Object |
| Gets a hash code for the Object |
| R.oo::hashCode.default |
| Gets an integer hashcoded for R objects |
| R.oo::Rdoc$hierarchy |
| Gets the class hierarchy |
| R.oo::intToChar.default |
| Converts a vector of integers into a vector of ASCII characters |
| R.oo::isAbstract.Class |
| Checks if a class is abstract or not |
| R.oo::isBeingCreated.Class |
| Checks if a class is currently being initiated initiated |
| R.oo::isDeprecated.Class |
| Checks if a class is deprecated or not |
| R.oo::Rdoc$isKeyword |
| Checks if a word is a Rd keyword |
| R.oo::isLoaded.Package |
| Checks if the package is installed on the search path or not |
| R.oo::isOlderThan.Package |
| Checks if the package is older than a given version |
| R.oo::isPrivate.Class |
| Checks if a class is defined private or not |
| R.oo::isProtected.Class |
| Checks if a class is defined protected or not |
| R.oo::isPublic.Class |
| Checks if a class is defined public or not |
| R.oo::isReferable.BasicObject |
| Checks if the object is referable or not |
| R.oo::isReferable.Object |
| Checks if the object is referable or not |
| R.oo::isStatic.Class |
| Checks if a class is static or not |
| R.oo::Rdoc$isVisible |
| Checks if a member is visible given its modifiers |
| R.oo::ll.Object |
| Generates a list of informative properties of all members of an Object |
| R.oo::ll.Package |
| Generates a list of informative properties of all members of the package |
| R.oo::ll.default |
| Generates a list of informative properties of all members of an environment |
| R.oo::Object$load |
| Static method to load an Object from a file or a connection |
| R.oo::load.Package |
| Loads a package |
| R.oo::Rdoc$methodsInheritedFrom |
| Gets all methods inherited from a class in Rd format |
| R.oo::newInstance.BasicObject |
| Creates a new instance of the same class as this object |
| R.oo::newInstance.Class |
| Creates a new instance of this class |
| R.oo::newInstance.Object |
| Creates a new instance of the same class as this object |
| R.oo::novirtual.Object |
| Returns a reference to the same Object with virtual fields turned off |
| R.oo::objectSize.BasicObject |
| Gets the size of the BasicObject in bytes |
| R.oo::objectSize.Object |
| Gets the size of the Object in bytes |
| R.oo::objectSize.default |
| Gets the size of the object in bytes |
| R.oo::objectSize.environment |
| Gets the size of an environment in bytes |
| R.oo::print.BasicObject |
| Prints an BasicObject |
| R.oo::print.Class |
| Prints detailed information about the class and its fields and methods |
| R.oo::print.Exception |
| Prints the Exception |
| R.oo::print.Interface |
| Prints an Interface |
| R.oo::print.Object |
| Prints an Object |
| R.oo::printStackTrace.Exception |
| Prints the stack trace saved when the exception was created |
| R.oo::save.Object |
| Saves an Object to a file or a connection |
| R.oo::setConstructorS3.default |
| Defines a class in S3/UseMethod style |
| R.oo::Rdoc$setManPath |
| Sets the path to the directory where the Rd files should be saved |
| R.oo::Rdoc$setNameFormat |
| Sets the current name format |
| R.oo::showChangeLog.Package |
| Show the change log of this package |
| R.oo::showContents.Package |
| Show the CONTENTS file of this package |
| R.oo::showDescriptionFile.Package |
| Show the DESCRIPTION file of this package |
| R.oo::showHowToCite.Package |
| Show the HOWTOCITE file of this package |
| R.oo::startupMessage.Package |
| Generates a 'package successfully loaded' package startup message |
| R.oo::staticCode.Object |
| Method that will be call each time a new instance of a class is created |
| R.oo::throw.Exception |
| Throws an Exception that can be caught |
| R.oo::throw.default |
| Throws an Exception |
| R.oo::throw.error |
| Throws (rethrows) an object of class 'error' |
| R.oo::trim.default |
| Converts to a string and removes leading and trailing whitespace |
| R.oo::typeOfClass.default |
| Gets the type of a class (S3 or S4) |
| R.oo::unload.Package |
| Unloads a package |
| R.oo::uses.Interface |
| Specifies that an object uses this Interface |
| R.utils::Arguments |
| Static class to validate and process arguments |
| R.utils::Assert |
| The Assert class |
| R.utils::FileProgressBar |
| A progress bar that sets the size of a file accordingly |
| R.utils::GString |
| Character string with advanced substitutions |
| R.utils::Java |
| Static class for Java related methods |
| R.utils::LComments |
| The LComments class |
| R.utils::MultiVerbose |
| A Verbose class ignoring everything |
| R.utils::Non-documented objects |
| Non-documented objects |
| R.utils::NullVerbose |
| A Verbose class ignoring everything |
| R.utils::Options |
| The Options class |
| R.utils::ProgressBar |
| Provides text based counting progress bar |
| R.utils::R.utils-package |
| Package R.utils |
| R.utils::Settings |
| Class for applicational settings |
| R.utils::SmartComments |
| Abstract class SmartComments |
| R.utils::Sys.readlink2 |
| Read File Symbolic Links (also on Windows) |
| R.utils::System |
| Static class to query information about the system |
| R.utils::TextStatusBar |
| A status bar at the R prompt that can be updated |
| R.utils::TimeoutException |
| TimeoutException represents timeout errors |
| R.utils::VComments |
| The VComments class |
| R.utils::Verbose |
| Class to writing verbose messages to a connection or file |
| R.utils::addFinalizerToLast.default |
| Modifies .Last() to call 'finalizeSession() |
| R.utils::as.character.GString |
| Gets the processed character string |
| R.utils::as.character.Options |
| Returns a character string version of this object |
| R.utils::as.character.ProgressBar |
| Gets a string description of the progress bar |
| R.utils::as.character.Verbose |
| Returns a character string version of this object |
| R.utils::as.double.Verbose |
| Gets a numeric value of this object |
| R.utils::as.list.MultiVerbose |
| Gets a list of Verbose objects |
| R.utils::as.list.Options |
| Gets a list representation of the options |
| R.utils::as.logical.Verbose |
| Gets a logical value of this object |
| R.utils::Java$asByte |
| Converts a numeric to a Java byte |
| R.utils::Java$asInt |
| Converts an numeric to a Java integer |
| R.utils::Java$asLong |
| Converts a numeric to a Java long |
| R.utils::Java$asShort |
| Converts a numeric to a Java short |
| R.utils::attachLocally.list |
| Assigns an objects elements locally |
| R.utils::callHooks.default |
| Call hook functions by hook name |
| R.utils::callHooks.function |
| Call hook functions |
| R.utils::capitalize.default |
| Capitalizes/decapitalizes each character string in a vector |
| R.utils::capture.Verbose |
| Captures output of a function |
| R.utils::captureOutput |
| Evaluate an R expression and captures the output |
| R.utils::cat.Verbose |
| Concatenates and prints objects if above threshold |
| R.utils::Assert$check |
| Static method asserting that a generic condition is true |
| R.utils::cleanup.FileProgressBar |
| Removes the progress file for a file progress bar |
| R.utils::cmdArgs |
| Simple access to parsed command-line arguments |
| R.utils::cmdArgsCall |
| Calls an R function passing command-line arguments |
| R.utils::colClasses.default |
| Creates a vector of column classes used for tabular reading |
| R.utils::commandArgs |
| Extract command-line arguments |
| R.utils::compile.SmartComments |
| Preprocess a vector of code lines |
| R.utils::compressFile.default |
| Compressing and decompressing files |
| R.utils::compressPDF.default |
| Compresses a PDF (into a new PDF) |
| R.utils::convertComment.SmartComments |
| Converts a single smart comment to R code |
| R.utils::convertComment.VComments |
| Converts a verbose comment to R code |
| R.utils::copyDirectory.default |
| Copies a directory |
| R.utils::countLines.default |
| Counts the number of lines in a text file |
| R.utils::createFileAtomically.default |
| Creates a file atomically |
| R.utils::createLink.default |
| Creates a link to a file or a directory |
| R.utils::createWindowsShortcut.default |
| Creates a Microsoft Windows Shortcut (.lnk file) |
| R.utils::System$currentTimeMillis |
| Get the current time in milliseconds |
| R.utils::dataFrame.default |
| Allocates a data frame with given column classes |
| R.utils::detachPackage.default |
| Detaches packages by name |
| R.utils::dimNA< -.default |
| Sets the dimension of an object with the option to infer one dimension automatically |
| R.utils::displayCode.default |
| Displays the contents of a text file with line numbers and more |
| R.utils::doCall.default |
| Executes a function call with option to ignore unused arguments |
| R.utils::downloadFile.character |
| Downloads a file |
| R.utils::draw.density |
| Draws a density curve |
| R.utils::eget |
| Gets a variable by name |
| R.utils::egsub |
| Global substitute of expression using regular expressions |
| R.utils::enter.Verbose |
| Writes a message and indents the following output |
| R.utils::env |
| Creates a new environment, evaluates an expression therein, and returns the environment |
| R.utils::equals.Options |
| Checks if this object is equal to another Options object |
| R.utils::equals.Verbose |
| Checks if this object is equal to another |
| R.utils::evaluate.GString |
| Parses and evaluates a GString |
| R.utils::evaluate.Verbose |
| Evaluates a function and prints its results if above threshold |
| R.utils::exit.Verbose |
| Writes a message and unindents the following output |
| R.utils::extract.array |
| Extract a subset of an array, matrix or a vector with unknown dimensions |
| R.utils::file.info2 |
| Extract File Information (acknowledging symbolic file links also on Windows) |
| R.utils::fileAccess.default |
| Checks the permission of a file or a directory |
| R.utils::filePath.default |
| Construct the path to a file from components and expands Windows Shortcuts along the pathname from root to leaf |
| R.utils::finalizeSession.default |
| Function to call for finalizing the R session |
| R.utils::findFiles.default |
| Finds one or several files in multiple directories |
| R.utils::System$findGhostscript |
| Searches for a Ghostview executable on the current system |
| R.utils::System$findGraphicsDevice |
| Searches for a working PNG device |
| R.utils::Settings$findSettings |
| Searches for the settings file in one or several directories |
| R.utils::findSourceTraceback.default |
| Finds all 'srcfile' objects generated by source() in all call frames |
| R.utils::flush.TextStatusBar |
| Flushes the output |
| R.utils::format.binmode |
| Converts a binary/octal/hexadecimal number into a string |
| R.utils::getAbsolutePath.default |
| Gets the absolute pathname string |
| R.utils::getBarString.ProgressBar |
| Gets the progress bar string to be displayed |
| R.utils::GString$getBuiltinDate |
| Gets the current date |
| R.utils::GString$getBuiltinDatetime |
| Gets the current date and time |
| R.utils::GString$getBuiltinHostname |
| Gets the hostname of the system running R |
| R.utils::GString$getBuiltinOs |
| Gets the operating system of the running machine |
| R.utils::GString$getBuiltinPid |
| Gets the process id of the current R session |
| R.utils::GString$getBuiltinRhome |
| Gets the path where R is installed |
| R.utils::GString$getBuiltinRversion |
| Gets the current R version |
| R.utils::GString$getBuiltinTime |
| Gets the current time |
| R.utils::GString$getBuiltinUsername |
| Gets the username of the user running R |
| R.utils::Arguments$getCharacters |
| Coerces to a character vector and validates |
| R.utils::Arguments$getDoubles |
| Coerces to a double vector and validates |
| R.utils::Arguments$getEnvironment |
| Gets an existing environment |
| R.utils::Arguments$getFilename |
| Gets and validates a filename |
| R.utils::System$getHostname |
| Retrieves the computer name of the current host |
| R.utils::Arguments$getIndices |
| Coerces to a integer vector and validates |
| R.utils::Arguments$getInstanceOf |
| Gets an instance of the object that is of a particular class |
| R.utils::Arguments$getIntegers |
| Coerces to a integer vector and validates |
| R.utils::getLabel.TextStatusBar |
| Gets the current value of a label |
| R.utils::getLeaves.Options |
| Gets all (non-list) options in a flat list |
| R.utils::getLoadedPathname.Settings |
| Gets the pathname of the settings file loaded |
| R.utils::Arguments$getLogicals |
| Coerces to a logical vector and validates |
| R.utils::getMessage.TimeoutException |
| Gets the message of the exception |
| R.utils::Arguments$getNumerics |
| Coerces to a numeric vector and validates |
| R.utils::getOption.Options |
| Gets an option |
| R.utils::getParent.default |
| Gets the string of the parent specified by this pathname |
| R.utils::getRaw.GString |
| Gets the unprocessed GString |
| R.utils::Arguments$getReadablePathname |
| Gets a readable pathname |
| R.utils::Arguments$getReadablePathnames |
| Gets a readable pathname |
| R.utils::Arguments$getRegularExpression |
| Gets a valid regular expression pattern |
| R.utils::getRelativePath.default |
| Gets the relative pathname relative to a directory |
| R.utils::getThreshold.Verbose |
| Gets current verbose threshold |
| R.utils::getTimestampFormat.Verbose |
| Gets the default timestamp format |
| R.utils::System$getUsername |
| Retrieves the name of the user running R |
| R.utils::GString$getVariableValue |
| Gets a variable value given a name and attributes |
| R.utils::Arguments$getVector |
| Validates a vector |
| R.utils::Arguments$getVerbose |
| Coerces to Verbose object |
| R.utils::Arguments$getWritablePathname |
| Gets a writable pathname |
| R.utils::hasOption.Options |
| Checks if an option exists |
| R.utils::hasUrlProtocol.default |
| Checks if one or several pathnames has a URL protocol |
| R.utils::header.Verbose |
| Writes a header |
| R.utils::hpaste.default |
| Concatenating vectors into human-readable strings |
| R.utils::hsize |
| Convert byte sizes into human-readable byte sizes |
| R.utils::inAnyInterval.numeric |
| Checks if a set of values are inside one or more intervals |
| R.utils::increase.ProgressBar |
| Increases (steps) progress bar |
| R.utils::Assert$inheritsFrom |
| Static method asserting that an object inherits from of a certain class |
| R.utils::insert.default |
| Insert values to a vector at certain positions |
| R.utils::installPackages.default |
| Install R packages by name or URL |
| R.utils::intToBin |
| Converts an integer to a binary/octal/hexadecimal number |
| R.utils::intervalsToSeq.matrix |
| Generates a vector of indices from a matrix of intervals |
| R.utils::isAbsolutePath.default |
| Checks if this pathname is absolute |
| R.utils::isDirectory.default |
| Checks if the file specification is a directory |
| R.utils::isDone.ProgressBar |
| Checks if progress bar is completed |
| R.utils::isEof.connection |
| Checks if the current file position for a connection is at the 'End of File' |
| R.utils::isFile.default |
| Checks if the file specification is a file |
| R.utils::Assert$isMatrix |
| Static method asserting that an object is a matrix |
| R.utils::isModified.Settings |
| Checks if settings has been modified compared to whats on file |
| R.utils::isOn.NullVerbose |
| Checks if the output is on |
| R.utils::isOn.Verbose |
| Checks if the output is on |
| R.utils::isOpen.character |
| Checks if there is an open connection to a file |
| R.utils::isPackageInstalled.default |
| Checks if a package is installed or not |
| R.utils::isPackageLoaded.default |
| Checks if a package is loaded or not |
| R.utils::Assert$isScalar |
| Static method asserting that an object is a single value |
| R.utils::isUrl.default |
| Checks if one or several pathnames is URLs |
| R.utils::Assert$isVector |
| Static method asserting that an object is a vector |
| R.utils::isVisible.NullVerbose |
| Checks if a certain verbose level will be shown or not |
| R.utils::isVisible.Verbose |
| Checks if a certain verbose level will be shown or not |
| R.utils::isZero.default |
| Checks if a value is (close to) zero or not |
| R.utils::lastModified.default |
| Gets the time when the file was last modified |
| R.utils::less.Verbose |
| Creates a cloned instance with a higher threshold |
| R.utils::listDirectory.default |
| Gets the file names in the directory |
| R.utils::loadAnywhere.Settings |
| Loads settings from file |
| R.utils::loadObject.default |
| Method to load object from a file or a connection |
| R.utils::loadToEnv.default |
| Method to load objects to a new environment |
| R.utils::mapToIntervals.numeric |
| Maps values to intervals |
| R.utils::mergeIntervals.numeric |
| Merges intervals |
| R.utils::mkdirs.default |
| Creates a directory including any necessary but nonexistent parent directories |
| R.utils::more.Verbose |
| Creates a cloned instance with a lower threshold |
| R.utils::mout |
| Miscellaneous functions for outputting via message() |
| R.utils::moveInSearchPath.default |
| Moves a environment in the search path to another position |
| R.utils::mpager |
| A \"pager\" function that outputs to standard error |
| R.utils::names.Options |
| Gets the full pathname of all (non-list) options |
| R.utils::nbrOfOptions.Options |
| Gets the number of options set |
| R.utils::newline.TextStatusBar |
| Writes a newline |
| R.utils::newline.Verbose |
| Writes one or several empty lines |
| R.utils::nullfile |
| Gets the pathname or a connection to the NULL device on the current platform |
| R.utils::off.Verbose |
| Turn off the output |
| R.utils::on.Verbose |
| Turn on the output |
| R.utils::onGarbageCollect.default |
| Registers a function to be called when the R garbage collector is (detected to be) running |
| R.utils::onSessionExit.default |
| Registers a function to be called when the R session finishes |
| R.utils::System$openBrowser |
| Opens an HTML document using the OS default HTML browser |
| R.utils::parse.GString |
| Parses a GString |
| R.utils::parse.SmartComments |
| Parses one single smart comment |
| R.utils::System$parseDebian |
| Parses a string, file or connection for Debian formatted parameters |
| R.utils::patchCode.default |
| Patches installed and loaded packages and more |
| R.utils::popBackupFile.default |
| Drops a backup suffix from the backup pathname |
| R.utils::popMessage.TextStatusBar |
| Adds a message above the status bar |
| R.utils::popTemporaryFile.default |
| Drops a temporary suffix from the temporary pathname |
| R.utils::print.GString |
| Prints the processed GString |
| R.utils::print.Verbose |
| Prints objects if above threshold |
| R.utils::printf.default |
| C-style formatted output |
| R.utils::printf.Verbose |
| Formats and prints object if above threshold |
| R.utils::promptAndSave.Settings |
| Prompt user to save modified settings |
| R.utils::pushBackupFile.default |
| Appends a backup suffix to the pathname |
| R.utils::pushState.Verbose |
| Pushes the current indentation state of the Verbose object |
| R.utils::pushTemporaryFile.default |
| Appends a temporary suffix to the pathname |
| R.utils::readBinFragments.default |
| Reads binary data from disjoint sections of a connection or a file |
| R.utils::Java$readByte |
| Reads a Java formatted byte (8 bits) from a connection |
| R.utils::Java$readInt |
| Reads a Java formatted int (32 bits) from a connection |
| R.utils::readRdHelp.default |
| Reads one or more Rd help files in a certain format |
| R.utils::Java$readShort |
| Reads a Java formatted short (16 bits) from a connection |
| R.utils::readTable.default |
| Reads a file in table format |
| R.utils::readTableIndex.default |
| Reads a single column from file in table format |
| R.utils::Java$readUTF |
| Reads a Java (UTF-8) formatted string from a connection |
| R.utils::readWindowsShellLink.default |
| Reads a Microsoft Windows Shortcut (.lnk file) |
| R.utils::readWindowsShortcut.default |
| Reads a Microsoft Windows Shortcut (.lnk file) |
| R.utils::removeDirectory.default |
| Removes a directory |
| R.utils::resample.default |
| Sample values from a set of elements |
| R.utils::reset.ProgressBar |
| Reset progress bar |
| R.utils::reset.SmartComments |
| Resets a SmartComments compiler |
| R.utils::reset.VComments |
| Resets a VComments compiler |
| R.utils::ruler.Verbose |
| Writes a ruler |
| R.utils::saveAnywhere.Settings |
| Saves settings to file |
| R.utils::saveObject.default |
| Saves an object to a file or a connection |
| R.utils::seqToHumanReadable.default |
| Gets a short human readable string representation of an vector of indices |
| R.utils::seqToIntervals.default |
| Gets all contiguous intervals of a vector of indices |
| R.utils::setDefaultLevel.Verbose |
| Sets the current default verbose level |
| R.utils::setLabel.TextStatusBar |
| Sets the value of a label |
| R.utils::setLabels.TextStatusBar |
| Sets new values of given labels |
| R.utils::setMaxValue.ProgressBar |
| Sets maximum value |
| R.utils::setOption.Options |
| Sets an option |
| R.utils::setOption.default |
| Sets a option in R |
| R.utils::setProgress.ProgressBar |
| Sets current progress |
| R.utils::setStepLength.ProgressBar |
| Sets default step length |
| R.utils::setThreshold.Verbose |
| Sets verbose threshold |
| R.utils::setTicks.ProgressBar |
| Sets values for which ticks should be visible |
| R.utils::setTimestampFormat.Verbose |
| Sets the default timestamp format |
| R.utils::setValue.ProgressBar |
| Sets current value |
| R.utils::shell.exec2 |
| Open a file or URL using Windows File Associations |
| R.utils::sourceDirectory.default |
| Sources files recursively to either local or global environment |
| R.utils::sourceTo.default |
| Parses and evaluates code from a file or a connection |
| R.utils::splitByPattern.default |
| Splits a single character string by pattern |
| R.utils::str.Options |
| Prints the structure of the options |
| R.utils::str.Verbose |
| Prints the structure of an object if above threshold |
| R.utils::summary.Verbose |
| Generates a summary of an object if above threshold |
| R.utils::swapXY.density |
| Swaps x and y coordinates of a density object |
| R.utils::systemR.default |
| Launches another R process from within R |
| R.utils::tempvar |
| Gets a unique non-existing temporary variable name |
| R.utils::timestamp.Verbose |
| Writes a timestamp |
| R.utils::timestampOn.Verbose |
| Turns automatic timestamping on and off |
| R.utils::tmpfile |
| Creates a temporary file with content |
| R.utils::toCamelCase.default |
| Converts a string of words into a merged camel-cased word |
| R.utils::toUrl.default |
| Converts a pathname into a URL |
| R.utils::touchFile.default |
| Updates the timestamp of a file |
| R.utils::unwrap.array |
| Unwrap an array, matrix or a vector to an array of more dimensions |
| R.utils::update.FileProgressBar |
| Updates file progress bar |
| R.utils::update.ProgressBar |
| Updates progress bar |
| R.utils::update.TextStatusBar |
| Updates the status bar (visually) |
| R.utils::updateLabels.TextStatusBar |
| Sets the new values of given labels and updates the status bar |
| R.utils::use.default |
| Attaches or loads packages |
| R.utils::useRepos |
| Sets package repositories |
| R.utils::validate.SmartComments |
| Validates the compiled lines |
| R.utils::validate.VComments |
| Validates the compiled lines |
| R.utils::warnings.Verbose |
| Outputs any warnings recorded |
| R.utils::whichVector.logical |
| Identifies TRUE elements in a logical vector |
| R.utils::withCapture |
| Evaluates an expression and captures the code and/or the output |
| R.utils::withLocale |
| Evaluate an R expression with locale set temporarily |
| R.utils::withOptions |
| Evaluate an R expression with options set temporarily |
| R.utils::withRepos |
| Evaluate an R expression with repositories set temporarily |
| R.utils::withSeed |
| Evaluate an R expression with a temporarily set random set |
| R.utils::withSink |
| Evaluate an R expression while temporarily diverting output |
| R.utils::withTimeout |
| Evaluate an R expression and interrupts it if it takes too long |
| R.utils::wrap.array |
| Reshape an array or a matrix by permuting and/or joining dimensions |
| R.utils::writeBinFragments.default |
| Writes binary data to disjoint sections of a connection or a file |
| R.utils::Java$writeByte |
| Writes a byte (8 bits) to a connection in Java format |
| R.utils::writeDataFrame.data.frame |
| Writes a data.frame to tabular text file |
| R.utils::Java$writeInt |
| Writes a integer (32 bits) to a connection in Java format |
| R.utils::writeRaw.MultiVerbose |
| Writes to each of the Verbose objects |
| R.utils::writeRaw.NullVerbose |
| All output methods |
| R.utils::writeRaw.Verbose |
| Writes objects if above threshold |
| R.utils::Java$writeShort |
| Writes a short (16 bits) to a connection in Java format |
| R.utils::Java$writeUTF |
| Writes a string to a connection in Java format (UTF-8) |
| raster::Arith-methods |
| Arithmetic with Raster* objects |
| raster::Compare-methods |
| Compare Raster* objects |
| raster::Extent |
| Class "Extent" |
| raster::KML |
| Write a KML or KMZ file |
| raster::Logic-methods |
| Logical operators and functions |
| raster::Math-methods |
| Mathematical functions |
| raster::NAvalue<- |
| Set the NA value of a RasterLayer |
| raster::RGB |
| Create a Red-Green-Blue Raster object |
| raster::BasicRaster-class |
| Raster* classes |
| raster::SpPoly |
| Rcpp classes |
| raster::Summary-methods |
| Summary methods |
| raster::addLayer |
| Add or drop a layer |
| raster::adjacent |
| Adjacent cells |
| raster::aggregate |
| Aggregate raster cells or SpatialPolygons/Lines |
| raster::alignExtent |
| Align an extent (object of class Extent) |
| raster::animate |
| Animate layers of a Raster* object |
| raster::approxNA |
| Estimate values for cell values that are 'NA' by interpolating between layers |
| raster::area |
| Size of cells |
| raster::as.character |
| Character representation of a Raster or Extent object |
| raster::as.data.frame |
| Get a data.frame with raster cell values, or coerce SpatialPolygons, Lines, or Points to a data.frame |
| raster::as.list,Raster-method |
| Create a list of RasterLayer objects |
| raster::as.logical,Raster-method |
| Change cell values to logical or integer values |
| raster::as.vector |
| Get a vector, matrix, or array with raster cell values |
| raster::as.raster |
| Coerce to a 'raster' object |
| raster::atan2,Raster,Raster-method |
| Two argument arc-tangent |
| raster::Geary |
| Spatial autocorrelation |
| raster::bandnr |
| Number of bands |
| raster::barplot |
| Bar plot of a RasterLayer |
| raster::bind |
| Bind Spatial* objects |
| raster::blockSize |
| Block size for writing files |
| raster::boundaries |
| boundaries (edges) detection |
| raster::boxplot |
| Box plot of Raster objects |
| raster::brick |
| Create a RasterBrick object |
| raster::buffer |
| buffer |
| raster::calc |
| Calculate |
| raster::cellFromRowCol |
| Get cell, row, or column number |
| raster::cellStats |
| Statistics across cells |
| raster::cellsFromExtent |
| Cells from extent, and vice versa |
| raster::clamp |
| Clamp values |
| raster::clearValues |
| Clear values |
| raster::click |
| Query by clicking on a map |
| raster::clump |
| Detect clumps |
| raster::beginCluster |
| Use a multi-core cluster |
| raster::colortable |
| colortable |
| raster::compareRaster |
| Compare Raster objects |
| raster::compareCRS |
| Partially compare two CRS objects |
| raster::contour |
| Contour plot |
| raster::xmin |
| Coordinates of the Extent of a Raster object |
| raster::corLocal |
| Local correlation coefficient |
| raster::cover |
| Replace NA values with values of other layers |
| raster::crop |
| Crop |
| raster::crosstab |
| Cross-tabulate |
| raster::cut |
| Convert values to classes |
| raster::cv |
| Coefficient of variation |
| raster::dataType |
| Data type |
| raster::fromDisk |
| Are values in memory and/or on disk? |
| raster::density |
| Density plot |
| raster::dim |
| Dimensions of a Raster* object |
| raster::direction |
| Direction |
| raster::disaggregate |
| Disaggregate |
| raster::distance |
| Distance |
| raster::distanceFromPoints |
| Distance from points |
| raster::drawPoly |
| Draw a line or polygon |
| raster::drawExtent |
| Create an Extent object by drawing on a map |
| raster::erase |
| Erase parts of a SpatialPolygons* or SpatialLines* object. The inverse of this can be done with 'intersect' |
| raster::extend |
| Extend |
| raster::extension |
| Filename extensions |
| raster::extent |
| Extent |
| raster::extract |
| Extract values from Raster objects |
| raster::[[,Raster,ANY,ANY-method |
| Indexing to extract values of a Raster* object |
| raster::minValue |
| Minimum and maximum values |
| raster::is.factor |
| Factors |
| raster::filename |
| Filename |
| raster::filledContour |
| Filled contour plot |
| raster::flip |
| Flip |
| raster::flowPath |
| Flow path |
| raster::focal |
| Focal values |
| raster::focalWeight |
| Focal weights matrix |
| raster::freq |
| Frequency table |
| raster::gain |
| Gain and offset of values on file |
| raster::geom |
| Get the coordinates of a vector type Spatial* object |
| raster::getData |
| Get geographic data |
| raster::values |
| Get raster cell values |
| raster::getValuesBlock |
| Get a block of raster cell values |
| raster::getValuesFocal |
| Get focal raster cell values |
| raster::gridDistance |
| Distance on a grid |
| raster::hdr |
| Header files |
| raster::head |
| Show the head or tail of a Raster* object |
| raster::hillShade |
| Hill shading |
| raster::hist |
| Histogram |
| raster::image |
| Image |
| raster::readIniFile |
| Read a .ini file |
| raster::init |
| Initialize a Raster object with values |
| raster::interpolate |
| Interpolate |
| raster::intersect |
| Intersect |
| raster::isLonLat |
| Is this longitude/latitude data? |
| raster::layerize |
| Layerize |
| raster::localFun |
| Local functions |
| raster::mask |
| Mask values in a Raster object |
| raster::match |
| Value matching for Raster* objects |
| raster::merge |
| Merge Raster* objects |
| raster::metadata |
| Metadata |
| raster::modal |
| modal value |
| raster::mosaic |
| Merge Raster* objects using a function for overlapping areas |
| raster::movingFun |
| Moving functions |
| raster::labels,Raster-method |
| Names of raster layers |
| raster::ncol |
| Number or rows, columns, and cells of a Raster* object |
| raster::nlayers |
| Number of layers |
| raster::origin |
| Origin |
| raster::overlay |
| Overlay Raster objects |
| raster::pairs |
| Pairs plot (matrix of scatterplots) |
| raster::persp |
| Perspective plot |
| raster::plot |
| Plot a Raster* object |
| raster::plotRGB |
| Red-Green-Blue plot of a multi-layered Raster object |
| raster::pointDistance |
| Distance between points |
| raster::predict |
| Spatial model predictions |
| raster::readStart |
| Helper functions for programming |
| raster::projectRaster |
| Project a Raster object |
| raster::wkt |
| Get or set a coordinate reference system (projection) |
| raster::dataSize |
| Raster file properties |
| raster::quantile |
| Raster quantiles |
| raster::raster-package |
| Overview of the functions in the raster package |
| raster::raster |
| Create a RasterLayer object |
| raster::rasterFromCells |
| Subset a raster by cell numbers |
| raster::rasterFromXYZ |
| Create a Raster* object from x, y, z values |
| raster::rasterOptions |
| Global options for the raster package |
| raster::rasterTmpFile |
| Temporary files |
| raster::rasterToContour |
| Raster to contour lines conversion |
| raster::rasterToPoints |
| Raster to points conversion |
| raster::rasterToPolygons |
| Raster to polygons conversion |
| raster::rasterize |
| Rasterize points, lines, or polygons |
| raster::readAll,RasterLayer-method |
| Read values from disk |
| raster::reclassify |
| Reclassify |
| raster::rectify |
| rectify a Raster object |
| raster::[<-,RasterLayer,RasterLayer,missing-method |
| Replace cell values or layers of a Raster* object |
| raster::resample |
| Resample a Raster object |
| raster::xres |
| Resolution |
| raster::rotate |
| Rotate |
| raster::rotated |
| Do the raster cells have a rotation? |
| raster::round,RasterLayer-method |
| Integer values |
| raster::floor,Extent-method |
| round Extent coordinates |
| raster::rowFromCell |
| Row or column number from a cell number |
| raster::rowSums |
| rowSums and colSums for Raster objects |
| raster::sampleInt |
| Sample integer values |
| raster::sampleRandom |
| Random sample |
| raster::sampleRegular |
| Regular sample |
| raster::sampleStratified |
| Stratified random sample |
| raster::stackSave |
| Save or open a RasterStack file |
| raster::scale |
| Scale values |
| raster::scalebar |
| scalebar |
| raster::select |
| Geometric subsetting |
| raster::setExtent |
| Set the extent of a RasterLayer |
| raster::setMinMax,RasterLayer-method |
| Compute min and max values |
| raster::values<- |
| Set values of a Raster object |
| raster::shapefile |
| Read or write a shapefile |
| raster::shift |
| Shift |
| raster::slopeAspect |
| Slope and aspect |
| raster::spLines |
| Create SpatialLines* or SpatialPolygons* |
| raster::spplot |
| Use spplot to plot a Raster* or other object |
| raster::stack |
| Create a RasterStack object |
| raster::stackApply |
| Apply a function on subsets of a RasterStack or RasterBrick |
| raster::stackSelect |
| Select cell values from a multi-layer Raster* object |
| raster::stretch |
| Stretch |
| raster::subs |
| Substitute values in a Raster* object |
| raster::subset |
| Subset layers in a Raster* object |
| raster::summary,RasterLayer-method |
| Summary |
| raster::symdif |
| Symetrical difference |
| raster::terrain |
| Terrain characteristics |
| raster::text |
| Add labels to a map |
| raster::t |
| Transpose |
| raster::trim |
| Trim |
| raster::union |
| Union Extent or SpatialPolygons* objects |
| raster::unique |
| Unique values |
| raster::unstack |
| Unstack |
| raster::update |
| Update raster cells of files (on disk) |
| raster::validCell |
| Validity of a cell, column or row number |
| raster::Which |
| Which cells are TRUE? |
| raster::which.min |
| Where is the min or max value? |
| raster::writeFormats |
| File types for writing |
| raster::writeRaster,RasterLayer,character-method |
| Write raster data to a file |
| raster::writeStart |
| Write values to a file |
| raster::xFromCol |
| Coordinates from a row, column or cell number |
| raster::zApply |
| z (time) apply |
| raster::zonal |
| Zonal statistics |
| raster::zoom |
| Zoom in on a map |
| raster::getZ |
| Get or set z-values |
| rbokeh::elements |
| "Periodic Table" dataset |
| rbokeh::flightfreq |
| Flight frequency dataset |
| rbokeh::ly_abline |
| Add an "abline" layer to a Bokeh figure |
| rbokeh::ly_annular_wedge |
| Add an "annular_wedge" layer to a Bokeh figure |
| rbokeh::ly_annulus |
| Add an "annulus" layer to a Bokeh figure |
| rbokeh::ly_arc |
| Add an "arc" layer to a Bokeh figure |
| rbokeh::ly_bar |
| Add a "barchart" layer to a Bokeh figure |
| rbokeh::ly_bezier |
| Add a "bezier" layer to a Bokeh figure |
| rbokeh::ly_boxplot |
| Add a "boxplot" layer to a Bokeh figure |
| rbokeh::ly_contour |
| Add a "contour" layer to a Bokeh figure |
| rbokeh::ly_crect |
| Add a "crect" (centered rectangle) layer to a Bokeh figure |
| rbokeh::ly_curve |
| Add a "curve" layer to a Bokeh figure |
| rbokeh::ly_density |
| Add a "density" layer to a Bokeh figure |
| rbokeh::ly_hist |
| Add a "hist" layer to a Bokeh figure |
| rbokeh::ly_image |
| Add an "image" layer to a Bokeh figure |
| rbokeh::ly_image_url |
| Add an "image_url" layer to a Bokeh figure |
| rbokeh::ly_lines |
| Add a "lines" layer to a Bokeh figure Draws lines with the given coordinates. |
| rbokeh::ly_map |
| Add a "map" layer to a Bokeh figure |
| rbokeh::ly_multi_line |
| Add a "multi_line" layer to a Bokeh figure |
| rbokeh::ly_oval |
| Add an "oval" layer to a Bokeh figure |
| rbokeh::ly_patch |
| Add a "patch" layer to a Bokeh figure |
| rbokeh::ly_points |
| Add a "points" layer to a Bokeh figure |
| rbokeh::ly_polygons |
| Add a "polygons" layer to a Bokeh figure |
| rbokeh::ly_quadratic |
| Add a "quadratic" layer to a Bokeh figure |
| rbokeh::ly_quantile |
| Add a "quantile" layer to a Bokeh figure |
| rbokeh::ly_ray |
| Add a "ray" layer to a Bokeh figure |
| rbokeh::ly_rect |
| Add a "rect" layer to a Bokeh figure |
| rbokeh::ly_segments |
| Add a "segments" layer to a Bokeh figure |
| rbokeh::ly_text |
| Add a "text" layer to a Bokeh figure |
| rbokeh::ly_wedge |
| Add a "wedge" layer to a Bokeh figure |
| rbokeh::nyctaxihex |
| Hexagon binned counts of NYC taxi pickup locations |
| rbokeh::tool_box_select |
| Add "box_select" tool to a Bokeh figure |
| rbokeh::tool_box_zoom |
| Add "box_zoom" tool to a Bokeh figure |
| rbokeh::tool_crosshair |
| Add "crosshair" tool to a Bokeh figure |
| rbokeh::tool_hover |
| Add "hover" tool to a Bokeh figure |
| rbokeh::tool_lasso_select |
| Add "lasso_select" tool to a Bokeh figure |
| rbokeh::tool_pan |
| Add "pan" tool to a Bokeh figure |
| rbokeh::tool_reset |
| Add "reset" tool to a Bokeh figure |
| rbokeh::tool_resize |
| Add "resize" tool to a Bokeh figure |
| rbokeh::tool_save |
| Add "save" tool to a Bokeh figure |
| rbokeh::tool_tap |
| Add "tap" tool to a Bokeh figure |
| rbokeh::tool_wheel_zoom |
| Add "wheel_zoom" tool to a Bokeh figure |
| rbokeh::x_axis |
| Customize x axis of a Bokeh figure |
| rbokeh::x_range |
| Update x axis range in a Bokeh figure |
| rbokeh::y_axis |
| Customize x axis of a Bokeh figure |
| rbokeh::y_range |
| Update y axis range in a Bokeh figure |
| RColorBrewer::brewer.pal |
| ColorBrewer palettes |
| RcppEigen::RcppEigen-package |
| Rcpp/Eigen bridge |
| RcppEigen::RcppEigen.package.skeleton |
| Create a skeleton for a new package that intends to use RcppEigen |
| RcppEigen::fastLm |
| Bare-bones linear model fitting function |
| readr::callback |
| Callback classes |
| readr::col_skip |
| Skip a column |
| readr::cols |
| Create column specification |
| readr::melt_delim_chunked |
| Melt a delimited file by chunks |
| readr::parse_logical |
| Parse logicals, integers, and reals |
| readr::parse_datetime |
| Parse date/times |
| readr::parse_factor |
| Parse factors |
| readr::parse_guess |
| Parse using the "best" type |
| readr::parse_number |
| Parse numbers, flexibly |
| readr::parse_vector |
| Parse a character vector. |
| readr::read_delim_chunked |
| Read a delimited file by chunks |
| readr::read_lines_chunked |
| Read lines from a file or string by chunk. |
| readr::cols_condense |
| Examine the column specifications for a data frame |
| rematch2::re_exec |
| Extract Data From First Regular Expression Match Into a Data Frame |
| rematch2::re_exec_all |
| Extract Data From All Regular Expression Matches Into a Data Frame |
| rematch2::re_match |
| Extract Regular Expression Matches Into a Data Frame |
| rematch2::re_match_all |
| Extract All Regular Expression Matches Into a Data Frame |
| reshape::cast |
| Cast function |
| reshape::colsplit |
| Split a vector into multiple columns |
| reshape::combine_factor |
| Combine factor levels |
| reshape::condense.df |
| Condense a data frame |
| reshape::condense |
| Condense |
| reshape::expand.grid.df |
| Expand grid |
| reshape::expand |
| Expand |
| reshape::french_fries |
| Sensory data from a french fries experiment |
| reshape::funstofun |
| Aggregate multiple functions into a single function |
| reshape::melt |
| Melt |
| reshape::melt.array |
| Melt an array |
| reshape::melt.data.frame |
| Melt a data frame |
| reshape::merge_all |
| Merge all |
| reshape::namerows |
| Name rows |
| reshape::recast |
| Recast |
| reshape::rename |
| Rename |
| reshape::rescaler |
| Rescaler |
| reshape::smiths |
| Demo data describing the Smiths |
| reshape::sort_df |
| Sort data frame |
| reshape::sparseby |
| Apply a Function to a Data Frame split by levels of indices |
| reshape::stamp |
| Stamp |
| reshape::tips |
| Tipping data |
| reshape::uniquedefault |
| Unique default |
| reshape::untable |
| Untable a dataset |
| reshape2::cast |
| Cast functions Cast a molten data frame into an array or data frame. |
| reshape2::colsplit |
| Split a vector into multiple columns |
| reshape2::french_fries |
| Sensory data from a french fries experiment. |
| reshape2::margins |
| Figure out margining variables. |
| reshape2::melt |
| Convert an object into a molten data frame. |
| reshape2::melt.array |
| Melt an array. |
| reshape2::melt.data.frame |
| Melt a data frame into form suitable for easy casting. |
| reshape2::melt.default |
| Melt a vector. For vectors, makes a column of a data frame |
| reshape2::melt.list |
| Melt a list by recursively melting each component. |
| reshape2::recast |
| Recast: melt and cast in a single step |
| reshape2::smiths |
| Demo data describing the Smiths. |
| reshape2::tips |
| Tipping data |
| rex::capture |
| Create a capture group |
| rex::character_class |
| Create character classes |
| rex::counts |
| Counts |
| rex::group |
| Create a grouped expression |
| rex::lookarounds |
| Lookarounds |
| rex::not |
| Do not match |
| rex::%or% |
| Or |
| rex::rex |
| Generate a regular expression. |
| rex::shortcuts |
| Shortcuts |
| rex::single_shortcuts |
| Single shortcuts |
| rex::wildcards |
| Wildcards |
| rgeos::bbox2SP |
| Converts a bounding box into a SpatialPolygons object. |
| rgeos::Ring-class |
| Class "Ring" |
| rgeos::SpatialCollections-class |
| Class "SpatialCollections" |
| rgeos::SpatialRings-class |
| Class "SpatialRings" |
| rgeos::SpatialRingsDataFrame-class |
| Class "SpatialRingsDataFrame" |
| rgeos::gpc.poly-class |
| Class "gpc.poly" |
| rgeos::gpc.poly.nohole-class |
| Class "gpc.poly.nohole" |
| rgeos::createSPComment |
| RGEOS Polygon Hole Comment Functions |
| rgeos::SpatialCollections |
| create SpatialCollections |
| rgeos::Ring |
| create SpatialRings or SpatialRingsDataFrame |
| rgeos::poly_findInBoxGEOS |
| Experimental Functions |
| rgeos::new-generics |
| Generics/Methods for polygon objects |
| rgeos::polyfile |
| Read/Write polygon data |
| rgeos::polygonsLabel |
| Compute optimal label positions for polygons |
| rgeos::gInterpolate |
| Interpolate Points along Line Geometry |
| rgeos::gProject |
| Project Points to Line Geometry |
| rgeos::gArea |
| Area of Geometry |
| rgeos::gBuffer |
| Buffer Geometry |
| rgeos::gDistance |
| Distance between geometries |
| rgeos::gLength |
| Length of Geometry |
| rgeos::gNearestPoints |
| Closest Points of two Geometries |
| rgeos::overGeomGeom |
| Find spatial join or intersections |
| rgeos::gContains |
| Geometry Relationships - Contains and Within |
| rgeos::gCrosses |
| Geometry Relationships - Crosses and Overlaps |
| rgeos::gEquals |
| Geometry Relationships - Equality |
| rgeos::gIntersects |
| Geometry Relationships - Intersects and Disjoint |
| rgeos::gRelate |
| Geometry Relationships - Intersection Matrix Pattern (DE-9IM) |
| rgeos::gTouches |
| Geometry Relationships - Touches |
| rgeos::gIsEmpty |
| Is Geometry Empty? |
| rgeos::gIsRing |
| Is Geometry a Ring? |
| rgeos::gIsSimple |
| Is Geometry Simple? |
| rgeos::gIsValid |
| Is Geometry Valid? |
| rgeos::gDifference |
| Geometry Difference |
| rgeos::gIntersection |
| Geometry Intersections |
| rgeos::gSymdifference |
| Geometry Symmetric Difference |
| rgeos::gUnion |
| Geometry Union |
| rgeos::gBoundary |
| Boundary of Geometry |
| rgeos::gCentroid |
| Centroid of Geometry |
| rgeos::gConvexHull |
| Convex Hull of Geometry |
| rgeos::gCoverageUnion |
| Coverage Union |
| rgeos::gDelaunayTriangulation |
| Compute Delaunay triangulation between points |
| rgeos::gEnvelope |
| Envelope of Geometry |
| rgeos::gMakeValid |
| Make invalid geometries valid |
| rgeos::gMaximumInscribedCircle |
| Centroid of Geometry |
| rgeos::gMinumumRotatedRectangle |
| Centroid of Geometry |
| rgeos::gNode |
| Linestring Noder |
| rgeos::gPointOnSurface |
| Point on Surface of Geometry |
| rgeos::gPolygonize |
| Linestring Polygonizer |
| rgeos::gSimplify |
| Simplify Geometry |
| rgeos::getScale |
| RGEOS Utility Functions |
| rgeos::readWKT |
| RGEOS WKT Functions |
| RgoogleMaps::NYleukemia |
| Upstate New York Leukemia Data |
| RgoogleMaps::columbus |
| Columbus OH spatial analysis data set |
| RgoogleMaps::incidents |
| San Francisco crime data |
| RgoogleMaps::pennLC |
| Pennsylvania Lung Cancer |
| rJava::J |
| High level API for accessing Java |
| rJava::$,jobjRef-method |
| Field/method operator for Java objects |
| rJava::as.list.jobjRef |
| Converts java objects or arrays to R lists |
| rJava::clone |
| Object cloner |
| rJava::%instanceof% |
| Is a java object an instance of a given java class |
| rJava::.jarray |
| Java array handling functions |
| rJava::jarrayRef-class |
| Class "jarrayRef" Reference to an array Java object |
| rJava::javaImport |
| Attach mechanism for java packages |
| rJava::.jcall |
| Call a Java method |
| rJava::.jcast |
| Cast a Java object to another class |
| rJava::.jcastToArray |
| Ensures that a given object is an array reference |
| rJava::.jcheck |
| Java exception handling |
| rJava::jclassName-class |
| Class "jclassName" - a representation of a Java class name |
| rJava::.jengine |
| Java callback engineCast a Java object to another class |
| rJava::.jequals |
| Comparing Java References |
| rJava::.jfield |
| Obtains the value of a field |
| rJava::jfloat-class |
| Classes "jfloat", "jlong", "jbyte" and "jchar" specify Java native types that are not native in R |
| rJava::.jfloat |
| Wrap numeric vector as flat Java parameter |
| rJava::.jgc |
| Invoke Java Garbage Collection |
| rJava::.jinit |
| Initialize Java VM |
| rJava::.jmemprof |
| rJava memory profiler |
| rJava::.jnew |
| Create a Java object |
| rJava::.jnull |
| Java null object reference |
| rJava::jobjRef-class |
| Class "jobjRef" - Reference to a Java object |
| rJava::.jpackage |
| Initialize an R package containing Java code |
| rJava::jrectRef-class |
| Rectangular java arrays |
| rJava::.jmethods |
| Simple helper functions for Java reflection |
| rJava::.jserialize |
| Java object serialization |
| rJava::.jsimplify |
| Converts Java object to a simple scalar if possible |
| rJava::.jaddClassPath |
| Java Class Loader |
| rJava::new,jclassName-method |
| Create a new Java object |
| rJava::show,jobjRef-method |
| Show a Java Object Reference |
| rJava::toJava |
| Convert R objects to REXP references in Java |
| rJava::with.jobjRef |
| with and within methods for Java objects and class names |
| RJSONIO::JSON_T_ARRAY_BEGIN |
| Symbolic constants identifying the type of a JSON value. |
| RJSONIO::asJSVars |
| Serialize R objects as Javsscript/ActionScript variables |
| RJSONIO::basicJSONHandler |
| Create handler for processing JSON elements from a parser |
| RJSONIO::fromJSON |
| Convert JSON content to R objects |
| RJSONIO::isValidJSON |
| Test if JSON content is valid |
| RJSONIO::readJSONStream |
| Read JSON from a Connection/Stream |
| RJSONIO::toJSON |
| Convert an R object to a string in Javascript Object Notation |
| s2::s2_data_example_wkt |
| Example Geometries |
| s2::s2_data_tbl_countries |
| Low-resolution world boundaries, timezones, and cities |
| s20x::airpass.df |
| International Airline Passengers |
| s20x::apples.df |
| Apples Data |
| s20x::arousal.df |
| Changes in Pupil Size with Emotional Arousal |
| s20x::autocorPlot |
| Autocorrelation Plot |
| s20x::beer.df |
| US Beer Production |
| s20x::body.df |
| Body Image and Ethnicity |
| s20x::books.df |
| Books Data |
| s20x::boxqq |
| Box plots and normal quantile-quantile plots |
| s20x::bursary.df |
| Bursary Results for Auckland Secondary Schools |
| s20x::butterfat.df |
| Butterfat Data |
| s20x::camplake.df |
| Age and Length of Camp Lake Bluegills |
| s20x::chalk.df |
| Chalk Data |
| s20x::ciReg |
| Confidence Intervals for Regression models |
| s20x::computer.df |
| Computer Questionnaire |
| s20x::cooks20x |
| Cook's distance plot |
| s20x::course.df |
| Stats 20x Summer School Data |
| s20x::course2way.df |
| Exam Mark, Gender and Attendance for Stats 20x Summer School Students |
| s20x::crossFactors |
| Crossed Factors |
| s20x::crosstabs |
| Crosstabulation of two variables |
| s20x::diamonds.df |
| Prices and Weights of Diamonds |
| s20x::eovcheck |
| Testing for equality of variance plot |
| s20x::estimateContrasts |
| Contrast Estimates |
| s20x::fire.df |
| Fire Damage and Distance from the Fire Station |
| s20x::freq1way |
| Analysis of 1-dimensional frequency tables |
| s20x::fruitfly.df |
| Fruitfly Data |
| s20x::getVersion |
| s20x pacakge version number |
| s20x::house.df |
| Sale and Advertised Prices of Houses |
| s20x::incomes.df |
| Mean Family Incomes |
| s20x::interactionPlots |
| Interactions Plot for Two-way Analysis of Variance |
| s20x::lakemary.df |
| Ages and Lengths of Lake Mary Bluegills |
| s20x::larain.df |
| Los Angeles Rainfall |
| s20x::layout20x |
| Layout |
| s20x::levene.test |
| Levene test for the ANOVA Assumption |
| s20x::mazda.df |
| Year and Price of Mazda Cars |
| s20x::mening.df |
| Monthly Notifications of Meningococcal Disease |
| s20x::mergers.df |
| Merger Days |
| s20x::modcheck |
| Model checking plots |
| s20x::mozart.df |
| Length of Mozart's Movements |
| s20x::multipleComp |
| Multiple Comparisons |
| s20x::nail.df |
| Nail Polish Data |
| s20x::normcheck |
| Testing for normality plot |
| s20x::onewayPlot |
| One-way Analysis of Variance Plot |
| s20x::oysters.df |
| Oyster Abundances over Different Sites |
| s20x::pairs20x |
| Pairwise Scatter Plots with Histograms and Correlations |
| s20x::peru.df |
| Peruvian Indians |
| s20x::predict20x |
| Model Predictions for a Linear Model |
| s20x::predictCount |
| Predicted Counts for a Generalized Linear Model |
| s20x::predictGLM |
| Predictions for Generalized Linear Models |
| s20x::propslsd.new |
| LSD-Display Intervals |
| s20x::rain.df |
| Cloud Seeding and Levels of Rainfall |
| s20x::residPlot |
| Fitted values versus residuals plot |
| s20x::rowdistr |
| Row distributions from a cross-tabulation of two variables |
| s20x::rr |
| Read Data |
| s20x::seeds.df |
| Seeds Data |
| s20x::sheep.df |
| Sheep Data |
| s20x::skewness |
| Skewness Statistic |
| s20x::skulls.df |
| Skulls Data |
| s20x::snapper.df |
| Snapper Weight Data |
| s20x::soyabean.df |
| Soya Bean Yields |
| s20x::stripqq |
| Strip charts and normal quantile-quantile plots |
| s20x::summary1way |
| One-way Analysis of Variance Summary |
| s20x::summary2way |
| Two-way Analysis of Variance Summary |
| s20x::summaryStats |
| Summary Statistics |
| s20x::teach.df |
| Comparison of Three Teaching Methods |
| s20x::technitron.df |
| Technitron Salary Information |
| s20x::thyroid.df |
| Effect of a New Drug on Thyroid Weights |
| s20x::toothpaste.df |
| Crest Toothpaste |
| s20x::trendscatter |
| Trend and scatter plot |
| s20x::zoo.df |
| Zoo Attendance during an Advertising Campaign |
| sandwich::InstInnovation |
| Innovation and Institutional Ownership |
| sandwich::Investment |
| US Investment Data |
| sandwich::bwNeweyWest |
| Newey-West HAC Covariance Matrix Estimation |
| sandwich::PetersenCL |
| Petersen's Simulated Data for Assessing Clustered Standard Errors |
| sandwich::PublicSchools |
| US Expenditures for Public Schools |
| sandwich::bread |
| Bread for Sandwiches |
| sandwich::estfun |
| Extract Empirical Estimating Functions |
| sandwich::isoacf |
| Isotonic Autocorrelation Function |
| sandwich::kweights |
| Kernel Weights |
| sandwich::lrvar |
| Long-Run Variance of the Mean |
| sandwich::meat |
| A Simple Meat Matrix Estimator |
| sandwich::sandwich |
| Making Sandwiches with Bread and Meat |
| sandwich::vcovBS |
| (Clustered) Bootstrap Covariance Matrix Estimation |
| sandwich::vcovCL |
| Clustered Covariance Matrix Estimation |
| sandwich::vcovHAC |
| Heteroscedasticity and Autocorrelation Consistent (HAC) Covariance Matrix Estimation |
| sandwich::vcovHC |
| Heteroscedasticity-Consistent Covariance Matrix Estimation |
| sandwich::vcovOPG |
| Outer-Product-of-Gradients Covariance Matrix Estimation |
| sandwich::vcovPC |
| Panel-Corrected Covariance Matrix Estimation |
| sandwich::vcovPL |
| Clustered Covariance Matrix Estimation for Panel Data |
| sandwich::weightsAndrews |
| Kernel-based HAC Covariance Matrix Estimation |
| sandwich::weightsLumley |
| Weighted Empirical Adaptive Variance Estimation |
| sas7bdat::sas7bdat.sources |
| Internet SAS Database Resources |
| scales::label_bytes |
| Label bytes (1 kB, 2 MB, etc) |
| scales::label_dollar |
| Label currencies ($100, $2.50, etc) |
| scales::label_log |
| Label numbers in log format (10^3, 10^6, etc) |
| scales::label_number_auto |
| Label numbers, avoiding scientific notation where possible |
| scales::label_number_si |
| Label numbers with SI prefixes (2 kg, 5 mm, etc) |
| scales::label_ordinal |
| Label ordinal numbers (1st, 2nd, 3rd, etc) |
| scales::label_parse |
| Label with mathematical annotations |
| scales::label_percent |
| Label percentages (2.5%, 50%, etc) |
| scales::label_pvalue |
| Label p-values (e.g. <0.001, 0.25, p >= 0.99) |
| scales::label_scientific |
| Label numbers with scientific notation (e.g. 1e05, 1.5e-02) |
| scales::label_wrap |
| Label strings by wrapping across multiple lines |
| scales::rescale |
| Rescale continuous vector to have specified minimum and maximum |
| sf::db_drivers |
| Drivers for which update should be 'TRUE' by default |
| sf::extension_map |
| Map extension to driver |
| sf::prefix_map |
| Map prefix to driver |
| sf::st_agr |
| get or set relation_to_geometry attribute of an 'sf' object |
| sf::st_bbox |
| Return bounding of a simple feature or simple feature set |
| sf::st_crs |
| Retrieve coordinate reference system from object |
| sf::st_m_range |
| Return 'm' range of a simple feature or simple feature set |
| sf::st_z_range |
| Return 'z' range of a simple feature or simple feature set |
| shiny::NS |
| Namespaced IDs for inputs/outputs |
| shiny::actionButton |
| Action button/link |
| shiny::checkboxGroupInput |
| Checkbox Group Input Control |
| shiny::checkboxInput |
| Checkbox Input Control |
| shiny::dateInput |
| Create date input |
| shiny::dateRangeInput |
| Create date range input |
| shiny::fileInput |
| File Upload Control |
| shiny::fillPage |
| Create a page that fills the window |
| shiny::fixedPage |
| Create a page with a fixed layout |
| shiny::flowLayout |
| Flow layout |
| shiny::fluidPage |
| Create a page with fluid layout |
| shiny::navbarPage |
| Create a page with a top level navigation bar |
| shiny::numericInput |
| Create a numeric input control |
| shiny::passwordInput |
| Create a password input control |
| shiny::radioButtons |
| Create radio buttons |
| shiny::selectInput |
| Create a select list input control |
| shiny::sidebarLayout |
| Layout a sidebar and main area |
| shiny::sliderInput |
| Slider Input Widget |
| shiny::splitLayout |
| Split layout |
| shiny::submitButton |
| Create a submit button |
| shiny::textAreaInput |
| Create a textarea input control |
| shiny::textInput |
| Create a text input control |
| shiny::varSelectInput |
| Select variables from a data frame |
| shiny::verticalLayout |
| Lay out UI elements vertically |
| shinydashboard::box |
| Create a box for the main body of a dashboard |
| shinydashboard::dropdownMenuOutput |
| Create a dropdown menu output (client side) |
| shinydashboard::infoBox |
| Create an info box for the main body of a dashboard. |
| shinydashboard::menuItemOutput |
| Create a sidebar menu item output (client side) |
| shinydashboard::menuOutput |
| Create a dynamic menu output for shinydashboard (client side) |
| shinydashboard::messageItem |
| Create a message item to place in a dropdown message menu |
| shinydashboard::notificationItem |
| Create a notification item to place in a dropdown notification menu |
| shinydashboard::renderMenu |
| Create dynamic menu output (server side) |
| shinydashboard::sidebarMenu |
| Create a dashboard sidebar menu and menu items. |
| shinydashboard::sidebarMenuOutput |
| Create a sidebar menu output (client side) |
| shinydashboard::sidebarSearchForm |
| Create a search form to place in a sidebar |
| shinydashboard::sidebarUserPanel |
| A panel displaying user information in a sidebar |
| shinydashboard::tabBox |
| Create a tabbed box |
| shinydashboard::taskItem |
| Create a task item to place in a dropdown task menu |
| shinydashboard::valueBox |
| Create a value box for the main body of a dashboard. |
| shinyWidgets::animations |
| Animation names |
| shinyWidgets::autonumericInput |
| Autonumeric Input Widget |
| shinyWidgets::updateCurrencyInput |
| Update a Formatted Numeric Input Widget |
| shinyWidgets::currencyInput |
| Format Numeric Inputs |
| shinyWidgets::updateAutonumericInput |
| Update an Autonumeric Input Object |
| slam::abind_simple_sparse_array |
| Combine Sparse Arrays |
| slam::rowapply_simple_triplet_matrix |
| Apply Functions Over Sparse Matrix Margins |
| slam::simple_sparse_array |
| Simple Sparse Arrays |
| slam::tcrossprod_simple_triplet_matrix |
| Matrix Crossproduct |
| slam::read_stm_CLUTO |
| Read and Write Sparse Matrix Format Files |
| slam::simple_triplet_matrix |
| Simple Triplet Matrix |
| slam::slam_options |
| Options for the 'slam' package |
| slam::rollup |
| Rollup Sparse Arrays |
| slam::row_sums |
| Form Row and Column Sums and Means |
| sp::sp |
| A package providing classes and methods for spatial data: points, lines, polygons and grids |
| sp::CRS-class |
| Class "CRS" of coordinate reference system arguments |
| sp::DMS-class |
| Class "DMS" for degree, minute, decimal second values |
| sp::GridTopology-class |
| Class "GridTopology" |
| sp::Line-class |
| Class "Line" |
| sp::Line |
| create objects of class Line or Lines |
| sp::Lines-class |
| Class "Lines" |
| sp::Polygon-class |
| Class "Polygon" |
| sp::Polygons-class |
| Class "Polygons" |
| sp::Rlogo |
| Rlogo jpeg image |
| sp::Spatial-class |
| Class "Spatial" |
| sp::SpatialGrid-class |
| Class "SpatialGrid" |
| sp::SpatialPixels |
| define spatial grid |
| sp::SpatialGridDataFrame-class |
| Class "SpatialGridDataFrame" |
| sp::SpatialPixelsDataFrame |
| define spatial grid with attribute data |
| sp::SpatialLines-class |
| a class for spatial lines |
| sp::SpatialLines |
| create objects of class SpatialLines or SpatialLinesDataFrame |
| sp::SpatialLinesDataFrame-class |
| a class for spatial lines with attributes |
| sp::SpatialMultiPoints-class |
| Class "SpatialMultiPoints" |
| sp::SpatialMultiPoints |
| create objects of class SpatialMultiPoints or SpatialMultiPointsDataFrame |
| sp::SpatialMultiPointsDataFrame-class |
| Class "SpatialMultiPointsDataFrame" |
| sp::SpatialPixels-class |
| Class "SpatialPixels" |
| sp::SpatialPixelsDataFrame-class |
| Class "SpatialPixelsDataFrame" |
| sp::SpatialPoints-class |
| Class "SpatialPoints" |
| sp::SpatialPoints |
| create objects of class SpatialPoints or SpatialPointsDataFrame |
| sp::SpatialPointsDataFrame-class |
| Class "SpatialPointsDataFrame" |
| sp::SpatialPolygons-class |
| Class "SpatialPolygons" |
| sp::SpatialPolygons |
| create objects of class SpatialPolygons or SpatialPolygonsDataFrame |
| sp::SpatialPolygonsDataFrame-class |
| Class "SpatialPolygonsDataFrame" |
| sp::addAttrToGeom |
| constructs SpatialXxxDataFrame from geometry and attributes |
| sp::aggregate |
| aggregation of spatial objects |
| sp::as.SpatialPolygons.GridTopology |
| Make SpatialPolygons object from GridTopology object |
| sp::as.SpatialPolygons.PolygonsList |
| Making SpatialPolygons objects |
| sp::read.asciigrid |
| read/write to/from (ESRI) asciigrid format |
| sp::bbox,Spatial-method |
| retrieve bbox from spatial data |
| sp::bpy.colors |
| blue-pink-yellow color scheme, which also prints well on black/white printers |
| sp::bubble |
| Create a bubble plot of spatial data |
| sp::char2dms |
| Convert character vector to DMS-class object |
| sp::compassRose |
| Display a compass rose. |
| sp::coordinates-methods |
| retrieve (or set) spatial coordinates |
| sp::coordinates |
| set spatial coordinates to create a Spatial object, or retrieve spatial coordinates from a Spatial object |
| sp::coordnames |
| retrieve or assign coordinate names for classes in sp |
| sp::degAxis |
| axis with degrees |
| sp::dimensions,Spatial-method |
| retrieve spatial dimensions from spatial data |
| sp::disaggregate |
| disaggregate SpatialLines, SpatialLinesDataFrame, SpatialPolygons, or SpatialPolygonsDataFrame objects |
| sp::flipHorizontal |
| rearrange data in SpatialPointsDataFrame or SpatialGridDataFrame for plotting with spplot (levelplot/xyplot wrapper) |
| sp::geometry |
| Methods for retrieving the geometry from a composite (geometry + attributes) object |
| sp::gridded-methods |
| specify spatial data as being gridded, or find out whether they are |
| sp::gridIndex2nb |
| create neighbourhood (nb) object from grid geometry |
| sp::gridlines |
| Create N-S and E-W grid lines over a geographic region |
| sp::image.SpatialGridDataFrame |
| Image or contour method for gridded spatial data; convert to and from image data structure |
| sp::is.projected |
| Sets or retrieves projection attributes on classes extending SpatialData |
| sp::loadMeuse |
| deprecated function to load the Meuse data set |
| sp::mapasp |
| Calculate aspect ratio for plotting geographic maps; create nice degree axis labels |
| sp::merge |
| Merge a Spatial* object having attributes with a data.frame |
| sp::meuse |
| Meuse river data set |
| sp::meuse.grid |
| Prediction Grid for Meuse Data Set |
| sp::meuse.grid_ll |
| Prediction Grid for Meuse Data Set, geographical coordinates |
| sp::meuse.riv |
| River Meuse outline |
| sp::over |
| consistent spatial overlay for points, grids and polygons |
| sp::panel.spplot |
| panel and panel utility functions for spplot |
| sp::point.in.polygon |
| do point(s) fall in a given polygon? |
| sp::polygons-methods |
| Retrieve polygons from SpatialPolygonsDataFrame object |
| sp::polygons<- |
| sets spatial coordinates to create spatial data, or retrieves spatial coordinates |
| sp::recenter-methods |
| Methods for Function recenter in Package 'sp' |
| sp::select.spatial |
| select points spatially |
| sp::getSpPPolygonsIDSlots |
| Deprecated functions in sp |
| sp::spChFIDs-methods |
| change feature IDs in spatial objects |
| sp::spDistsN1 |
| Euclidean or Great Circle distance between points |
| sp::spTransform-methods |
| spTransform for map projection and datum transformation |
| sp::spplot |
| Plot methods for spatial data with attributes |
| sp::spsample-methods |
| sample point locations in (or on) a spatial object |
| sp::spmap.to.lev |
| rearrange data in SpatialPointsDataFrame or SpatialGridDataFrame for plotting with spplot (levelplot/xyplot wrapper) |
| sp::surfaceArea |
| Compute surface area of a digital elevation model. |
| sp::zerodist |
| find point pairs with equal spatial coordinates |
| SparseM::SparseM.hb |
| Harwell-Boeing Format Sparse Matrices |
| SparseM::image |
| Image Plot for Sparse Matrices |
| SparseM::SparseM.ontology |
| Sparse Matrix Class |
| SparseM::Ops.matrix.csr |
| Basic Linear Algebra for Sparse Matrices |
| SparseM::SparseM.solve |
| Linear Equation Solving for Sparse Matrices |
| SparseM::character or NULL-class |
| Class "character or NULL" |
| SparseM::lsq |
| Least Squares Problems in Surveying |
| SparseM::matrix.coo-class |
| Class "matrix.coo" |
| SparseM::matrix.csc-class |
| Class "matrix.csc" |
| SparseM::matrix.csc.hb-class |
| Class "matrix.csc.hb" |
| SparseM::matrix.csr-class |
| Class "matrix.csr" |
| SparseM::matrix.csr.chol-class |
| Class "matrix.csr.chol" |
| SparseM::matrix.ssc-class |
| Class "matrix.ssc" |
| SparseM::matrix.ssc.hb-class |
| Class "matrix.ssc.hb" |
| SparseM::matrix.ssr-class |
| Class "matrix.ssr" |
| SparseM::mslm-class |
| Class "mslm" |
| SparseM::numeric or NULL-class |
| Class "numeric or NULL" |
| SparseM::slm-class |
| Class "slm" |
| SparseM::slm |
| Fit a linear regression model using sparse matrix algebra |
| SparseM::slm.fit |
| Internal slm fitting functions |
| SparseM::slm.methods |
| Methods for slm objects |
| SparseM::summary.mslm-class |
| Class "summary.mslm" |
| SparseM::summary.slm-class |
| Class "summary.slm" |
| SparseM::triogramX |
| A Design Matrix for a Triogram Problem |
| stars::L7_ETMs |
| Landsat-7 bands for a selected region around Olinda, BR |
| stars::bcsd_obs |
| Monthly Gridded Meteorological Observations |
| stars::stars_sentinel2 |
| Sentinel-2 sample tile |
| stplanr::angle_diff |
| Calculate the angular difference between lines and a predefined bearing |
| stplanr::bbox_scale |
| Scale a bounding box |
| stplanr::bind_sf |
| Rapid row-binding of sf objects |
| stplanr::cents_sf |
| Spatial points representing home locations |
| stplanr::destinations_sf |
| Example destinations data |
| stplanr::flow |
| Data frame of commuter flows |
| stplanr::flow_dests |
| Data frame of invented commuter flows with destinations in a different layer than the origins |
| stplanr::flowlines_sf |
| Spatial lines dataset of commuter flows |
| stplanr::geo_bb |
| Flexible function to generate bounding boxes |
| stplanr::geo_bb_matrix |
| Create matrix representing the spatial bounds of an object |
| stplanr::geo_buffer |
| Perform a buffer operation on a temporary projected CRS |
| stplanr::geo_code |
| Convert text strings into points on the map |
| stplanr::geo_length |
| Calculate line length of line with geographic or projected CRS |
| stplanr::geo_projected |
| Perform GIS functions on a temporary, projected version of a spatial object |
| stplanr::geo_select_aeq |
| Select a custom projected CRS for the area of interest |
| stplanr::geo_toptail |
| Clip the first and last n metres of SpatialLines |
| stplanr::gsection |
| Function to split overlapping SpatialLines into segments |
| stplanr::is_linepoint |
| Identify lines that are points |
| stplanr::islines |
| Do the intersections between two geometries create lines? |
| stplanr::line2df |
| Convert geographic line objects to a data.frame with from and to coords |
| stplanr::line2points |
| Convert a spatial (linestring) object to points |
| stplanr::line_bearing |
| Find the bearing of straight lines |
| stplanr::line_breakup |
| Break up line objects into shorter segments |
| stplanr::line_midpoint |
| Find the mid-point of lines |
| stplanr::line_segment |
| Divide an sf object with LINESTRING geometry into regular segments |
| stplanr::line_segment1 |
| Segment a single line, using lwgeom or rsgeo |
| stplanr::line_via |
| Add geometry columns representing a route via intermediary points |
| stplanr::mats2line |
| Convert 2 matrices to lines |
| stplanr::n_segments |
| Vectorised function to calculate number of segments given a max segment length |
| stplanr::n_vertices |
| Retrieve the number of vertices in sf objects |
| stplanr::od2line |
| Convert origin-destination data to spatial lines |
| stplanr::od2odf |
| Extract coordinates from OD data |
| stplanr::od_aggregate_from |
| Summary statistics of trips originating from zones in OD data |
| stplanr::od_aggregate_to |
| Summary statistics of trips arriving at destination zones in OD data |
| stplanr::od_coords |
| Create matrices representing origin-destination coordinates |
| stplanr::od_coords2line |
| Convert origin-destination coordinates into desire lines |
| stplanr::od_data_lines |
| Example of desire line representations of origin-destination data from UK Census |
| stplanr::od_data_routes |
| Example segment-level route data |
| stplanr::od_data_sample |
| Example of origin-destination data from UK Census |
| stplanr::od_id |
| Combine two ID values to create a single ID number |
| stplanr::od_id_order |
| Generate ordered ids of OD pairs so lowest is always first This function is slow on large datasets, see szudzik_pairing for faster alternative |
| stplanr::od_oneway |
| Aggregate od pairs they become non-directional |
| stplanr::od_to_odmatrix |
| Convert origin-destination data from long to wide format |
| stplanr::odmatrix_to_od |
| Convert origin-destination data from wide to long format |
| stplanr::onewaygeo |
| Aggregate flows so they become non-directional (by geometry - the slow way) |
| stplanr::osm_net_example |
| Example of OpenStreetMap road network |
| stplanr::overline |
| Convert series of overlapping lines into a route network |
| stplanr::points2flow |
| Convert a series of points into geographical flows |
| stplanr::points2line |
| Convert a series of points, or a matrix of coordinates, into a line |
| stplanr::points2odf |
| Convert a series of points into a dataframe of origins and destinations |
| stplanr::quadrant |
| Split a spatial object into quadrants |
| stplanr::read_table_builder |
| Import and format Australian Bureau of Statistics (ABS) TableBuilder files |
| stplanr::rnet_breakup_vertices |
| Break up an sf object with LINESTRING geometry. |
| stplanr::rnet_cycleway_intersection |
| Example of cycleway intersection data showing problems for SpatialLinesNetwork objects |
| stplanr::rnet_group |
| Assign segments in a route network to groups |
| stplanr::rnet_overpass |
| Example of overpass data showing problems for SpatialLinesNetwork objects |
| stplanr::rnet_roundabout |
| Example of roundabout data showing problems for SpatialLinesNetwork objects |
| stplanr::route |
| Plan routes on the transport network |
| stplanr::route_average_gradient |
| Return average gradient across a route |
| stplanr::route_dodgr |
| Route on local data using the dodgr package |
| stplanr::route_network_sf |
| Spatial lines dataset representing a route network |
| stplanr::route_network_small |
| Spatial lines dataset representing a small route network |
| stplanr::route_osrm |
| Plan routes on the transport network using the OSRM server |
| stplanr::route_rolling_average |
| Return smoothed averages of vector |
| stplanr::route_rolling_diff |
| Return smoothed differences between vector values |
| stplanr::route_rolling_gradient |
| Calculate rolling average gradient from elevation data at segment level |
| stplanr::route_sequential_dist |
| Calculate the sequential distances between sequential coordinate pairs |
| stplanr::route_slope_matrix |
| Calculate the gradient of line segments from a matrix of coordinates |
| stplanr::route_slope_vector |
| Calculate the gradient of line segments from distance and elevation vectors |
| stplanr::routes_fast_sf |
| Spatial lines dataset of commuter flows on the travel network |
| stplanr::routes_slow_sf |
| Spatial lines dataset of commuter flows on the travel network |
| stplanr::stplanr-package |
| *stplanr: Sustainable Transport Planning with R* |
| stplanr::toptail_buff |
| Clip the beginning and ends of 'sf' LINESTRING objects |
| stplanr::zones_sf |
| Spatial polygons of home locations for flow analysis. |
| styler::cache_activate |
| Activate or deactivate the styler cache |
| styler::cache_clear |
| Clear the cache |
| styler::cache_info |
| Show information about the styler cache |
| styler::caching |
| Remember the past to be quicker in the future |
| styler::create_pos_ids |
| Create valid pos_ids if possible |
| styler::create_tokens |
| Create a terminal token |
| styler::style_dir |
| Prettify arbitrary R code |
| styler::style_file |
| Style '.R', '.Rmd', '.Rmarkdown' or '.Rnw' files |
| styler::style_pkg |
| Prettify R source code |
| styler::style_text |
| Style a string |
| styler::styler_addins |
| Stylers for RStudio Addins |
| styler::tidyverse_style |
| The tidyverse style |
| styler::validate_new_pos_ids |
| Validate sequence of new position ids |
| styler::visit |
| Visit'em all |
| styler::visit_one |
| Transform a flat parse table with a list of transformers |
| survey::HR |
| Wrappers for specifying PPS designs |
| survey::SE |
| Extract standard errors |
| survey::anova.svyglm |
| Model comparison for glms. |
| survey::api |
| Student performance in California schools |
| survey::as.fpc |
| Package sample and population size data |
| survey::as.svrepdesign |
| Convert a survey design to use replicate weights |
| survey::as.svydesign2 |
| Update to the new survey design format |
| survey::barplot.svystat |
| Barplots and Dotplots |
| survey::bootweights |
| Compute survey bootstrap weights |
| survey::jk1weights |
| Compute replicate weights |
| survey::calibrate.survey.design2 |
| Calibration (GREG) estimators |
| survey::compressWeights |
| Compress replicate weight matrix |
| survey::confint.svyglm |
| Confidence intervals for regression parameters |
| survey::crowd |
| Household crowding |
| survey::dimnames.DBIsvydesign |
| Dimensions of survey designs |
| survey::election |
| US 2004 presidential election data at state or county level |
| survey::estWeights |
| Estimated weights for missing data |
| survey::fpc |
| Small survey example |
| survey::ftable.svystat |
| Lay out tables of survey statistics |
| survey::hadamard |
| Hadamard matrices |
| survey::hospital |
| Sample of obstetric hospitals |
| survey::make.calfun |
| Calibration metrics |
| survey::marginpred |
| Standardised predictions (predictive margins) for regression models. |
| survey::mu284 |
| Two-stage sample from MU284 |
| survey::nhanes |
| Cholesterol data from a US survey |
| survey::nonresponse |
| Experimental: Construct non-response weights |
| survey::oldsvyquantile |
| Deprecated implementation of quantiles |
| survey::open.DBIsvydesign |
| Open and close DBI connections |
| survey::paley |
| Paley-type Hadamard matrices |
| survey::pchisqsum |
| Distribution of quadratic forms |
| survey::postStratify |
| Post-stratify a survey |
| survey::psrsq |
| Pseudo-Rsquareds |
| survey::rake |
| Raking of replicate weight design |
| survey::regTermTest |
| Wald test for a term in a regression model |
| survey::scd |
| Survival in cardiac arrest |
| survey::stratsample |
| Take a stratified sample |
| survey::subset.survey.design |
| Subset of survey |
| survey::surveyoptions |
| Options for the survey package |
| survey::svymean |
| Summary statistics for sample surveys |
| survey::svrVar |
| Compute variance from replicates |
| survey::svrepdesign |
| Specify survey design with replicate weights |
| survey::svy.varcoef |
| Sandwich variance estimator for glms |
| survey::svyCprod |
| Computations for survey variances |
| survey::svyby |
| Survey statistics on subsets |
| survey::svycdf |
| Cumulative Distribution Function |
| survey::svreptable |
| Contingency tables for survey data |
| survey::svyciprop |
| Confidence intervals for proportions |
| survey::svycontrast |
| Linear and nonlinearconstrasts of survey statistics |
| survey::svycoplot |
| Conditioning plots of survey data |
| survey::svycoxph |
| Survey-weighted Cox models. |
| survey::svycralpha |
| Cronbach's alpha |
| survey::svydesign |
| Survey sample analysis. |
| survey::svyfactanal |
| Factor analysis in complex surveys (experimental). |
| survey::svyglm |
| Survey-weighted generalised linear models. |
| survey::svyhist |
| Histograms and boxplots |
| survey::svyivreg |
| Two-stage least-squares for instrumental variable regression |
| survey::svykappa |
| Cohen's kappa for agreement |
| survey::svykm |
| Estimate survival function. |
| survey::svyloglin |
| Loglinear models |
| survey::svylogrank |
| Compare survival distributions |
| survey::svymle |
| Maximum pseudolikelihood estimation in complex surveys |
| survey::svynls |
| Probability-weighted nonlinear least squares |
| survey::svyolr |
| Proportional odds and related models |
| survey::svyplot |
| Plots for survey data |
| survey::svyprcomp |
| Sampling-weighted principal component analysis |
| survey::svypredmeans |
| Predictive marginal means |
| survey::svyqqplot |
| Quantile-quantile plots for survey data |
| survey::svyquantile |
| Quantiles under complex sampling. |
| survey::svyranktest |
| Design-based rank tests |
| survey::svyratio |
| Ratio estimation |
| survey::svyrecvar |
| Variance estimation for multistage surveys |
| survey::svysmooth |
| Scatterplot smoothing and density estimation |
| survey::svystandardize |
| Direct standardization within domains |
| survey::svysurvreg |
| Fit accelerated failure models to survey data |
| survey::svyttest |
| Design-based t-test |
| survey::trimWeights |
| Trim sampling weights |
| survey::twophase |
| Two-phase designs |
| survey::update.survey.design |
| Add variables to a survey design |
| survey::weights.survey.design |
| Survey design weights |
| survey::with.svyimputationList |
| Analyse multiple imputations |
| survey::withPV.survey.design |
| Analyse plausible values in surveys |
| survey::withReplicates |
| Compute variances by replicate weighting |
| survey::yrbs |
| One variable from the Youth Risk Behaviors Survey, 2015. |
| terra::NAflag<- |
| Set the NA flag |
| terra::RGB |
| Layers representing colors |
| terra::SpatExtent |
| Class "SpatExtent" |
| terra::SpatRaster |
| SpatRaster class |
| terra::SpatVector |
| Class "SpatVector" |
| terra::activeCat |
| Active category |
| terra::add<- |
| Add (in place) a SpatRaster to another SpatRaster object |
| terra::adjacent |
| Adjacent cells |
| terra::aggregate |
| Aggregate raster or vector data |
| terra::align |
| Align a SpatExtent |
| terra::all.equal |
| Compare two SpatRasters for equality |
| terra::animate |
| Animate a SpatRaster |
| terra::app |
| Apply a function to the cells of a SpatRaster |
| terra::approximate |
| Estimate values for cell values that are 'NA' by interpolating between layers |
| terra::Arith-methods |
| Arithmetic |
| terra::as.character,SpatExtent-method |
| Create a text representation of (the skeleton of) an object |
| terra::as.data.frame |
| SpatRaster or SpatVector to data.frame |
| terra::as.list |
| SpatRaster or SpatVector to list |
| terra::as.raster |
| Coerce to a "raster" object |
| terra::as.polygons |
| Conversion to a SpatVector, or to another SpatVector type |
| terra::atan2,SpatRaster,SpatRaster-method |
| Two argument arc-tangent |
| terra::autocor |
| Spatial autocorrelation |
| terra::barplot |
| Bar plot of a SpatRaster |
| terra::boundaries |
| Detect boundaries (edges) |
| terra::boxplot |
| Box plot of SpatRaster data |
| terra::buffer |
| Create a buffer around vector geometries or raster patches |
| terra::c |
| Combine SpatRaster or SpatVector objects |
| terra::cartogram |
| Cartogram |
| terra::as.numeric |
| Factors to numeric |
| terra::cellSize |
| Area covered by each raster cell |
| terra::cells |
| Get cell numbers |
| terra::centroids |
| Centroids |
| terra::clamp |
| Clamp values |
| terra::classify |
| Classify (or reclassify) cell values |
| terra::click |
| Query by clicking on a map |
| terra::as.vector |
| Coercion of a SpatRaster to a vector, matrix or array |
| terra::tighten |
| tighten SpatRaster or SpatRasterDataset objects |
| terra::coltab |
| Color table |
| terra::Compare-methods |
| Compare and logical methods |
| terra::compareGeom |
| Compare geometries of SpatRasters |
| terra::contour |
| Contour plot |
| terra::convHull |
| Convex hull and minimal rotated rectangle |
| terra::crds |
| Get the coordinates of SpatVector geometries or SpatRaster cells |
| terra::costDistance |
| Cost distance |
| terra::cover |
| Replace values with values from another object |
| terra::crop |
| Cut out a geographic subset |
| terra::crosstab |
| Cross-tabulate |
| terra::crs |
| Get or set a coordinate reference system |
| terra::deepcopy |
| Deep copy |
| terra::densify |
| Add additional nodes to lines or polygons |
| terra::density |
| Density plot |
| terra::depth |
| depth of SpatRaster layers |
| terra::describe |
| describe |
| terra::diff |
| Lagged differences |
| terra::size |
| Dimensions of a SpatRaster or SpatVector and related objects |
| terra::direction |
| Direction |
| terra::disagg |
| Disaggregate raster cells or vector geometries |
| terra::distance |
| Geographic distance |
| terra::dots |
| Make a dot-density map |
| terra::draw |
| Draw a polygon, line, extent, or points |
| terra::erase |
| Erase parts of a SpatVector object |
| terra::expanse |
| Get the expanse (area) of individual polygons or for all (summed) raster cells |
| terra::$,SpatExtent-method |
| Create, get or set a SpatExtent |
| terra::extend |
| Extend |
| terra::extract |
| Extract values from a SpatRaster |
| terra::is.factor |
| Categorical rasters |
| terra::fillHoles |
| Remove holes from polygons |
| terra::fillTime |
| Fill time gaps in a SpatRaster |
| terra::flip |
| Flip or reverse a raster |
| terra::focal |
| Focal values |
| terra::focal3D |
| Three-dimensional focal values |
| terra::focalCor |
| Focal function across two layers |
| terra::focalCpp |
| Compute focal values with an iterating C++ function |
| terra::focalMat |
| Focal weights matrix |
| terra::focalReg |
| Focal regression |
| terra::focalValues |
| Get focal values |
| terra::freq |
| Frequency table |
| terra::gaps |
| Find gaps between polygons |
| terra::gdal |
| GDAL version, supported file formats, and cache size |
| terra::geom |
| Get the geometry (coordinates) of a SpatVector |
| terra::geomtype |
| Geometry type of a SpatVector |
| terra::global |
| global statistics |
| terra::gridDistance |
| Distance on a grid |
| terra::head |
| Show the head or tail of a Spat* object |
| terra::hist |
| Histogram |
| terra::ifel |
| ifelse for SpatRasters |
| terra::image |
| SpatRaster image method |
| terra::impose |
| Impose the geometry of a SpatRaster to those in a SpatRasterCollection. |
| terra::init |
| Initialize a SpatRaster with values |
| terra::set.ext |
| Change values in-place |
| terra::inset |
| Make an inset map |
| terra::interpolate |
| Interpolate |
| terra::intersect |
| Intersection |
| terra::is.bool |
| Raster value types |
| terra::is.lonlat |
| Check for longitude/latitude crs |
| terra::is.valid |
| Check or fix polygon validity |
| terra::lapp |
| Apply a function to layers of a SpatRaster, or sub-datasets of a SpatRasterDataset |
| terra::linearUnits |
| Linear units of the coordinate reference system |
| terra::points |
| Add SpatVector data to a map |
| terra::tiles |
| Make tiles |
| terra::makeVRT |
| Make a VRT header file |
| terra::mask |
| Mask values in a SpatRaster or SpatVector |
| terra::match |
| Value matching for SpatRasters |
| terra::Math-methods |
| General mathematical methods |
| terra::mem_info |
| Memory available and needed |
| terra::merge |
| Merge SpatRaster or SpatExtent objects, or a SpatVector with a data.frame |
| terra::mergeTime |
| merge SpatRasters by timelines to create a single timeseries |
| terra::minmax |
| Get or compute the minimum and maximum cell values |
| terra::modal |
| modal value |
| terra::mosaic |
| mosaic SpatRasters |
| terra::na.omit |
| na.omit for SpatVector |
| terra::name |
| Names of Spat* objects |
| terra::nearby |
| nearby geometries |
| terra::north |
| North arrow |
| terra::not.na |
| is not NA |
| terra::origin |
| Origin |
| terra::pairs |
| Pairs plot (matrix of scatterplots) |
| terra::patches |
| Detect patches (clumps) of cells |
| terra::perim |
| Perimeter or length |
| terra::persp |
| Perspective plot |
| terra::plot |
| Make a map |
| terra::plotRGB |
| Red-Green-Blue plot of a multi-layered SpatRaster |
| terra::predict |
| Spatial model predictions |
| terra::project |
| Change the coordinate reference system |
| terra::quantile |
| Quantiles of spatial data |
| terra::query |
| Query a SpatVectorProxy object |
| terra::rapp |
| Range-Apply |
| terra::rast |
| Create a SpatRaster |
| terra::rasterize |
| Rasterize vector data |
| terra::rasterizeGeom |
| Rasterize geometric properties of vector data |
| terra::readStart |
| Read from, or write to, file |
| terra::rectify |
| rectify a SpatRaster |
| terra::relate |
| relate |
| terra::rep |
| Replicate layers |
| terra::$ |
| Get or replace attribute values of a SpatVector |
| terra::$<-,SpatRaster-method |
| Replace values of a SpatRaster |
| terra::resample |
| Transfer values of a SpatRaster to another one with a different geometry |
| terra::rescale |
| rescale |
| terra::rotate |
| Rotate a SpatRaster along longitude |
| terra::spatSample |
| Take a regular sample |
| terra::sapp |
| Apply a terra function that takes only a single layer and returns a SpatRaster to all layers of a SpatRaster |
| terra::sbar |
| scale bar |
| terra::scale |
| Scale values |
| terra::plot,SpatRaster,SpatRaster-method |
| Scatterplot of two SpatRaster layers |
| terra::sds |
| Create a SpatRasterDataset |
| terra::segregate |
| segregate |
| terra::sel |
| Spatial selection |
| terra::selectHighest |
| select cells with high or low values |
| terra::selectRange |
| Select the values of a range of layers, as specified by cell values in another SpatRaster |
| terra::serialize |
| serialize and saveRDS for SpatRaster and SpatVector |
| terra::values<- |
| Set the values of raster cells or of geometry attributes |
| terra::shade |
| Hill shading |
| terra::sharedPaths |
| Shared paths |
| terra::shift |
| Shift |
| terra::simplifyGeom |
| simplifyGeom geometries |
| terra::sources |
| Data sources of a SpatRaster |
| terra::spin |
| spin a SpatVector |
| terra::split |
| Split |
| terra::sprc |
| Create a SpatRasterCollection |
| terra::stretch |
| Stretch |
| terra::subset,SpatVector-method |
| Subset of a SpatVector |
| terra::subset |
| Subset of a SpatRaster |
| terra::subst |
| replace cell values |
| terra::Summary-methods |
| Summarize |
| terra::summary |
| summary |
| terra::svc |
| Create a SpatVectorCollection |
| terra::symdif |
| Symetrical difference |
| terra::tapp |
| Apply a function to subsets of layers of a SpatRaster |
| terra::terra-package |
| Description of the methods in the terra package |
| terra::terraOptions |
| Options |
| terra::terrain |
| terrain characteristics |
| terra::text |
| Add labels to a map |
| terra::time |
| time of SpatRaster layers |
| terra::tmpFiles |
| Temporary files |
| terra::topology |
| Vector topology methods |
| terra::t |
| Transpose |
| terra::trim |
| Trim a SpatRaster |
| terra::union |
| Union SpatVector or SpatExtent objects |
| terra::unique |
| Unique values |
| terra::units |
| units of SpatRaster or SpatRasterDataSet |
| terra::values |
| Cell values and geometry attributes |
| terra::vect |
| Create SpatVector objects |
| terra::vector_layers |
| List or remove layers from a vector file |
| terra::delaunay |
| Voronoi diagram and Delaunay triangles |
| terra::vrt |
| Virtual Raster Tiles |
| terra::where.min |
| Where are the cells with the min or max values? |
| terra::which.lyr |
| Which cells are TRUE? |
| terra::width |
| SpatVector geometric properties |
| terra::window |
| Set a window |
| terra::wrap |
| wrap (pack) a SpatRaster or SpatVector object |
| terra::writeCDF |
| Write raster data to a NetCDF file |
| terra::writeRaster,SpatRaster,character-method |
| Write raster data to a file |
| terra::writeVector,SpatVector,character-method |
| Write SpatVector data to a file |
| terra::xmin |
| Get or set single values of an extent |
| terra::xFromCol |
| Coordinates from a row, column or cell number and vice versa |
| terra::zonal |
| Zonal statistics |
| terra::zoom |
| Zoom in on a map |
| testthat::CheckReporter |
| Check reporter: 13 line summary of problems |
| testthat::DebugReporter |
| Test reporter: start recovery. |
| testthat::FailReporter |
| Test reporter: fail at end. |
| testthat::JunitReporter |
| Test reporter: summary of errors in jUnit XML format. |
| testthat::ListReporter |
| List reporter: gather all test results along with elapsed time and file information. |
| testthat::LocationReporter |
| Test reporter: location |
| testthat::MinimalReporter |
| Test reporter: minimal. |
| testthat::MultiReporter |
| Multi reporter: combine several reporters in one. |
| testthat::ProgressReporter |
| Test reporter: interactive progress bar of errors. |
| testthat::RStudioReporter |
| Test reporter: RStudio |
| testthat::Reporter |
| Manage test reporting |
| testthat::SilentReporter |
| Test reporter: gather all errors silently. |
| testthat::StopReporter |
| Test reporter: stop on error |
| testthat::SummaryReporter |
| Test reporter: summary of errors. |
| testthat::TapReporter |
| Test reporter: TAP format. |
| testthat::TeamcityReporter |
| Test reporter: Teamcity format. |
| testthat::auto_test |
| Watches code and tests for changes, rerunning tests as appropriate. |
| testthat::auto_test_package |
| Watches a package for changes, rerunning tests as appropriate. |
| testthat::comparison-expectations |
| Does code return a number greater/less than the expected value? |
| testthat::equality-expectations |
| Does code return the expected value? |
| testthat::expect_error |
| Does code throw an error, warning, message, or other condition? |
| testthat::expect_length |
| Does code return a vector with the specified length? |
| testthat::expect_match |
| Does a string match a regular expression? |
| testthat::expect_named |
| Does code return a vector with (given) names? |
| testthat::expect_null |
| Does code return 'NULL'? |
| testthat::expect_output |
| Does code print output to the console? |
| testthat::expect_reference |
| Does code return a reference to the expected object? |
| testthat::expect_silent |
| Does code execute silently? |
| testthat::inheritance-expectations |
| Does code return an object inheriting from the expected base type, S3 class, or S4 class? |
| testthat::logical-expectations |
| Does code return 'TRUE' or 'FALSE'? |
| TH.data::GBSG2 |
| German Breast Cancer Study Group 2 |
| TH.data::GlaucomaM |
| Glaucoma Database |
| TH.data::Westbc |
| Breast Cancer Gene Expression |
| TH.data::birds |
| Habitat Suitability for Breeding Bird Communities |
| TH.data::bodyfat |
| Prediction of Body Fat by Skinfold Thickness, Circumferences, and Bone Breadths |
| TH.data::geyser |
| Old Faithful Geyser Data |
| TH.data::mammoexp |
| Mammography Experience Study |
| TH.data::mn6.9 |
| I.Q. and attitude towards science |
| TH.data::sphase |
| S-phase Fraction of Tumor Cells |
| TH.data::wpbc |
| Wisconsin Prognostic Breast Cancer Data |
| threejs::LeMis |
| Les Miserables Character Coappearance Data |
| threejs::ego |
| Facebook social circles |
| threejs::flights |
| Global flight example data from Callum Prentice. |
| tibble::add_column |
| Add columns to a data frame |
| tibble::add_row |
| Add rows to a data frame |
| tibble::char |
| Format a character vector |
| tibble::num |
| Format a numeric vector |
| tibble::tibble_options |
| Package options |
| tidyr::billboard |
| Song rankings for Billboard top 100 in the year 2000 |
| tidyr::construction |
| Completed construction in the US in 2018 |
| tidyr::fish_encounters |
| Fish encounters |
| tidyr::relig_income |
| Pew religion and income survey |
| tidyr::smiths |
| Some data about the Smith family |
| tidyr::table1 |
| Example tabular representations |
| tidyr::us_rent_income |
| US rent and income data |
| tidyr::who |
| World Health Organization TB data |
| tidyr::world_bank_pop |
| Population data from the world bank |
| tm::acq |
| 50 Exemplary News Articles from the Reuters-21578 Data Set of Topic acq |
| tm::crude |
| 20 Exemplary News Articles from the Reuters-21578 Data Set of Topic crude |
| tm::read_dtm_Blei_et_al |
| Read Document-Term Matrices |
| tm::readPDF |
| Read In a PDF Document |
| tm::stopwords |
| Stopwords |
| tm::termFreq |
| Term Frequency Vector |
| tmap::tm_fill |
| Draw polygons |
| tmap::tm_sf |
| Draw simple features |
| tmap::tm_symbols |
| Draw symbols |
| tmap::tmap-package |
| Thematic Map Visualization |
| tmap::tmap_animation |
| Create animation |
| tmaptools::calc_densities |
| Calculate densities |
| tmaptools::palette_explorer |
| Explore color palettes |
| tmaptools::tmaptools-package |
| Thematic Map Tools |
| units::unitless |
| The "unit" type for vectors that are actually dimension-less. |
| urltools::suffix_dataset |
| Dataset of public suffixes |
| urltools::tld_dataset |
| Dataset of top-level domains (TLDs) |
| utf8::utf8-package |
| The utf8 Package |
| validate::add_indicators |
| Add indicator values as columns to a data frame |
| validate::aggregate,validation-method |
| Aggregate validation results |
| validate::all,validation-method |
| Test if all validations resulted in TRUE |
| validate::any,validation-method |
| Test if any validation resulted in TRUE |
| validate::as.data.frame,cellComparison-method |
| Translate cellComparison objects to data frame |
| validate::as.data.frame,confrontation-method |
| Coerce a confrontation object to data frame |
| validate::as.data.frame,expressionset-method |
| Translate an expressionset to data.frame |
| validate::as.data.frame,validatorComparison-method |
| Translate a validatorComparison object to data frame |
| validate::as.data.frame |
| Coerce to 'data.frame' |
| validate::barplot,cellComparison-method |
| Barplot of cellComparison object |
| validate::barplot,validation-method |
| Plot number of violations |
| validate::barplot,validatorComparison-method |
| Barplot of validatorComparison object |
| validate::cells |
| Cell counts and differences for a series of datasets |
| validate::check_that |
| Simple data validation interface |
| validate::compare |
| Compare similar data sets |
| validate::confront |
| Confront data with a (set of) expressionset(s) |
| validate::confrontation-class |
| Superclass storing results of confronting data with rules |
| validate::contains_exactly |
| Check records using a predifined table of (im)possible values |
| validate::created |
| Creation timestamp |
| validate::description |
| Rule description |
| validate::do_by |
| split-apply-combine for vectors, with equal-length outptu |
| validate::errors |
| Get messages from a confrontation object |
| validate::event |
| Get or set event information metadata from a 'confrontation' object. |
| validate::exists_any |
| Test for (unique) existence |
| validate::field_format |
| Check whether a field conforms to a regular expression |
| validate::field_length |
| Check number of code points |
| validate::hb |
| Hiridoglu-Berthelot function |
| validate::hierarchy |
| Check aggregates defined by a hierarchical code list |
| validate::indication-class |
| Store results of evaluating indicators |
| validate::is_complete |
| Test for completeness of records |
| validate::is_linear_sequence |
| Check whether a variable represents a linear sequence |
| validate::is_unique |
| Test for uniquenes of records |
| validate::keyset |
| Get key set stored with a confrontation |
| validate::label |
| Rule label |
| validate::lbj_cells-class |
| Logging object to use with the lumberjack package |
| validate::lbj_rules-class |
| Logging object to use with the lumberjack package |
| validate::length,expressionset-method |
| Determine the number of elements in an object. |
| validate::match_cells |
| Create matching subsets of a sequence of data |
| validate::meta |
| Get or set rule metadata |
| validate::nace_rev2 |
| NACE classification code table |
| validate::names<-,rule,character-method |
| Extract or set names |
| validate::number_format |
| Check the layouts of numbers. |
| validate::origin |
| Origin of rules |
| validate::plot,cellComparison-method |
| Line graph of a cellComparison object. |
| validate::plot,validation-method |
| Plot validation results |
| validate::plot,validator-method |
| Plot a validator object |
| validate::plot,validatorComparison-method |
| Line graph of validatorComparison object |
| validate::+,indicator,indicator-method |
| Combine two indicator objects |
| validate::+,validator,validator-method |
| Combine two validator objects |
| validate::retailers |
| data on Dutch supermarkets |
| validate::run_validation_file |
| Run a file with confrontations. Capture results |
| validate::samplonomy |
| Economic data on Samplonia |
| validate::satisfying |
| Select records (not) satisfying rules |
| validate::sdmx_codelist |
| Get code list from an SDMX REST API endpoint. |
| validate::sdmx_endpoint |
| Get URL for known SDMX registry endpoints |
| validate::[,expressionset-method |
| Select a subset |
| validate::sort,validation-method |
| Aggregate and sort the results of a validation. |
| validate::summary |
| Create a summary |
| validate::validation-class |
| Store results of evaluating validating expressions |
| validate::validator |
| Define validation rules for data |
| validate::validator_from_dsd |
| Extract a rule set from an SDMX DSD file |
| validate::values |
| Get values from object |
| validate::variables |
| Get variable names |
| validate::voptions |
| Set or get options globally or per object. |
| vipor::counties |
| Census ata on US counties |
| vipor::integrations |
| Data on HIV integration sites from several studies |
| viridis::unemp |
| USA Unemployment in 2009 |
| viridisLite::viridis.map |
| Color Map Data |
| vroom::cols_condense |
| Examine the column specifications for a data frame |
| wkb::readWKB |
| Convert WKB to Spatial Objects |
| wkb::writeWKB |
| Convert Spatial Objects to WKB |
| XML::[<-.XMLNode |
| Assign sub-nodes to an XML node |
| XML::Doctype-class |
| Class to describe a reference to an XML DTD |
| XML::Doctype |
| Constructor for DTD reference |
| XML::startElement.SAX |
| Generic Methods for SAX callbacks |
| XML::SAXState-class |
| A virtual base class defining methods for SAX parsing |
| XML::XMLAttributes-class |
| Class '"XMLAttributes"' |
| XML::XMLCodeFile-class |
| Simple classes for identifying an XML document containing R code |
| XML::XMLAbstractDocument-class |
| Class to represent reference to C-level data structure for an XML document |
| XML::XMLAbstractNode-class |
| Classes to describe an XML node object. |
| XML::addChildren |
| Add child nodes to an XML node |
| XML::addNode |
| Add a node to a tree |
| XML::getSibling |
| Manipulate sibling XML nodes |
| XML::append.xmlNode |
| Add children to an XML node |
| XML::asXMLNode |
| Converts non-XML node objects to XMLTextNode objects |
| XML::asXMLTreeNode |
| Convert a regular XML node to one for use in a "flat" tree |
| XML::catalogResolve |
| Look up an element via the XML catalog mechanism |
| XML::catalogLoad |
| Manipulate XML catalog contents |
| XML::coerce,XMLHashTreeNode,XMLHashTree-method |
| Transform between XML representations |
| XML::compareXMLDocs |
| Indicate differences between two XML documents |
| XML::docName |
| Accessors for name of XML document |
| XML::dtdElement |
| Gets the definition of an element or entity from a DTD. |
| XML::dtdElementValidEntry.character |
| Determines whether an XML element allows a particular type of sub-element. |
| XML::dtdIsAttribute |
| Query if a name is a valid attribute of a DTD element. |
| XML::dtdValidElement |
| Determines whether an XML tag is valid within another. |
| XML::ensureNamespace |
| Ensure that the node has a definition for particular XML namespaces |
| XML::findXInclude |
| Find the XInclude node associated with an XML node |
| XML::free |
| Release the specified object and clean up its memory usage |
| XML::genericSAXHandlers |
| SAX generic callback handler list |
| XML::getChildrenStrings |
| Get the individual |
| XML::getEncoding |
| Determines the encoding for an XML document or node |
| XML::getHTMLLinks |
| Get links or names of external files in HTML document |
| XML::getNodeLocation |
| Determine the location - file & line number of an (internal) XML node |
| XML::getNodeSet |
| Find matching nodes in an internal XML tree/DOM |
| XML::getRelativeURL |
| Compute name of URL relative to a base URL |
| XML::getXIncludes |
| Find the documents that are XInclude'd in an XML document |
| XML::getXMLErrors |
| Get XML/HTML document parse errors |
| XML::isXMLString |
| Facilities for working with XML strings |
| XML::length.XMLNode |
| Determine the number of children in an XMLNode object. |
| XML::libxmlVersion |
| Query the version and available features of the libxml library. |
| XML::makeClassTemplate |
| Create S4 class definition based on XML node(s) |
| XML::names.XMLNode |
| Get the names of an XML nodes children. |
| XML::newXMLDoc |
| Create internal XML node or document object |
| XML::newXMLNamespace |
| Add a namespace definition to an XML node |
| XML::parseDTD |
| Read a Document Type Definition (DTD) |
| XML::parseURI |
| Parse a URI string into its elements |
| XML::parseXMLAndAdd |
| Parse XML content and add it to a node |
| XML::print.XMLAttributeDef |
| Methods for displaying XML objects |
| XML::processXInclude |
| Perform the XInclude substitutions |
| XML::readHTMLList |
| Read data in an HTML list or all lists in a document |
| XML::readHTMLTable |
| Read data from one or more HTML tables |
| XML::readKeyValueDB |
| Read an XML property-list style document |
| XML::readSolrDoc |
| Read the data from a Solr document |
| XML::removeXMLNamespaces |
| Remove namespace definitions from a XML node or document |
| XML::replaceNodeWithChildren |
| Replace an XML node with it child nodes |
| XML::saveXML |
| Output internal XML Tree |
| XML::ExternalReference-class |
| Classes for working with XML Schema |
| XML::setXMLNamespace |
| Set the name space on a node |
| XML::supportsExpat |
| Determines which native XML parsers are being used. |
| XML::toHTML |
| Create an HTML representation of the given R object, using internal C-level nodes |
| XML::toString.XMLNode |
| Creates string representation of XML node |
| XML::xmlApply |
| Applies a function to each of the children of an XMLNode |
| XML::xmlAttributeType |
| The type of an XML attribute for element from the DTD |
| XML::xmlAttrs |
| Get the list of attributes of an XML node. |
| XML::xmlChildren |
| Gets the sub-nodes within an XMLNode object. |
| XML::xmlCleanNamespaces |
| Remove redundant namespaces on an XML document |
| XML::xmlClone |
| Create a copy of an internal XML document or node |
| XML::xmlContainsEntity |
| Checks if an entity is defined within a DTD. |
| XML::xmlDOMApply |
| Apply function to nodes in an XML tree/DOM. |
| XML::xmlElementSummary |
| Frequency table of names of elements and attributes in XML content |
| XML::xmlElementsByTagName |
| Retrieve the children of an XML node with a specific tag name |
| XML::xmlEventHandler |
| Default handlers for the SAX-style event XML parser |
| XML::xmlEventParse |
| XML Event/Callback element-wise Parser |
| XML::xmlGetAttr |
| Get the value of an attribute in an XML node |
| XML::xmlHandler |
| Example XML Event Parser Handler Functions |
| XML::xmlHashTree |
| Constructors for trees stored as flat list of nodes with information about parents and children. |
| XML::xmlName |
| Extraces the tag name of an XMLNode object. |
| XML::xmlNamespace |
| Retrieve the namespace value of an XML node. |
| XML::xmlNamespaceDefinitions |
| Get definitions of any namespaces defined in this XML node |
| XML::xmlNode |
| Create an XML node |
| XML::xmlOutputBuffer |
| XML output streams |
| XML::xmlParent |
| Get parent node of XMLInternalNode or ancestor nodes |
| XML::xmlParseDoc |
| Parse an XML document with options controlling the parser. |
| XML::xmlParserContextFunction |
| Identifies function as expecting an xmlParserContext argument |
| XML::xmlRoot |
| Get the top-level XML node. |
| XML::xmlSchemaValidate |
| Validate an XML document relative to an XML schema |
| XML::xmlSearchNs |
| Find a namespace definition object by searching ancestor nodes |
| XML::xmlSerializeHook |
| Functions that help serialize and deserialize XML internal objects |
| XML::xmlSize |
| The number of sub-elements within an XML node. |
| XML::xmlSource |
| Source the R code, examples, etc. from an XML document |
| XML::xmlStopParser |
| Terminate an XML parser |
| XML::xmlStructuredStop |
| Condition/error handler functions for XML parsing |
| XML::[.XMLNode |
| Convenience accessors for the children of XMLNode objects. |
| XML::xmlToDataFrame |
| Extract data from a simple XML document |
| XML::xmlToList |
| Convert an XML node/document to a more R-like list |
| XML::xmlToS4 |
| General mechanism for mapping an XML node to an S4 object |
| XML::xmlTree |
| An internal, updatable DOM object for building XML trees |
| XML::xmlTreeParse |
| XML Parser |
| XML::xmlValue |
| Extract or set the contents of a leaf XML node |
| xml2::xml_document-class |
| Register S4 classes |
| xtable::autoformat |
| Automatically Format Export Tables |
| xtable::print.xtable |
| Print Export Tables |
| xtable::print.xtableMatharray |
| Print Math Array |
| xtable::sanitize |
| Sanitization Functions |
| xtable::string |
| String handling functions |
| xtable::caption |
| Retrieve and Set Options for Export Tables |
| xtable::tli |
| Math scores from Texas Assessment of Academic Skills (TAAS) |
| xtable::toLatex.xtable |
| Convert Table to Latex |
| xtable::xtable |
| Create Export Tables |
| xtable::xtableFtable |
| Create and Export Flat Tables |
| xtable::xtableList |
| Create and Export Lists of Tables |
| xtable::xtableMatharray |
| Create LaTeX Mathematical Array |
| zoo::MATCH |
| Value Matching |
| zoo::ORDER |
| Ordering Permutation |
| zoo::aggregate.zoo |
| Compute Summary Statistics of zoo Objects |
| zoo::as.zoo |
| Coercion from and to zoo |
| zoo::coredata |
| Extracting/Replacing the Core Data of Objects |
| zoo::frequency<- |
| Replacing the Index of Objects |
| zoo::index |
| Extracting/Replacing the Index of Objects |
| zoo::is.regular |
| Check Regularity of a Series |
| zoo::lag.zoo |
| Lags and Differences of zoo Objects |
| zoo::make.par.list |
| Make a List from a Parameter Specification |
| zoo::merge.zoo |
| Merge Two or More zoo Objects |
| zoo::na.StructTS |
| Fill NA or specified positions. |
| zoo::na.aggregate |
| Replace NA by Aggregation |
| zoo::na.approx |
| Replace NA by Interpolation |
| zoo::na.fill |
| Fill NA or specified positions. |
| zoo::na.locf |
| Last Observation Carried Forward |
| zoo::na.trim |
| Trim Leading/Trailing Missing Observations |
| zoo::plot.zoo |
| Plotting zoo Objects |
| zoo::read.zoo |
| Reading and Writing zoo Series |
| zoo::rollapply |
| Apply Rolling Functions |
| zoo::rollmean |
| Rolling Means/Maximums/Medians/Sums |
| zoo::window.zoo |
| Extract/Replacing the Time Windows of Objects |
| zoo::xblocks |
| Plot contiguous blocks along x axis. |
| zoo::xyplot.zoo |
| Plot zoo Series with Lattice |
| zoo::yearmon |
| An Index Class for Monthly Data |
| zoo::yearqtr |
| An Index Class for Quarterly Data |
| zoo::zoo |
| Z's Ordered Observations |
| zoo::zooreg |
| Regular zoo Series |
| base::abbreviate |
| Abbreviate Strings |
| base::agrep |
| Approximate String Matching (Fuzzy Matching) |
| base::all.equal |
| Test if Two Objects are (Nearly) Equal |
| base::all |
| Are All Values True? |
| base::all.names |
| Find All Names in an Expression |
| base::any |
| Are Some Values True? |
| base::aperm |
| Array Transposition |
| base::append |
| Vector Merging |
| base::apply |
| Apply Functions Over Array Margins |
| base::args |
| Argument List of a Function |
| base::+ |
| Arithmetic Operators |
| base::array |
| Multi-way Arrays |
| base::as.data.frame |
| Coerce to a Data Frame |
| base::format.Date |
| Date Conversion Functions to and from Character |
| base::as.environment |
| Coerce to an Environment Object |
| base::as.function |
| Convert Object to Function |
| base::as.POSIXct |
| Date-time Conversion Functions |
| base::I |
| Inhibit Interpretation/Conversion of Objects |
| base::asplit |
| Split Array/Matrix By Its Margins |
| base::assign |
| Assign a Value to a Name |
| base::<- |
| Assignment Operators |
| base::attach |
| Attach Set of R Objects to Search Path |
| base::attr |
| Object Attributes |
| base::attributes |
| Object Attribute Lists |
| base::autoload |
| On-demand Loading of Packages |
| base::backsolve |
| Solve an Upper or Lower Triangular System |
| base::base-deprecated |
| Deprecated Functions in Package 'base' |
| base::base-package |
| The R Base Package |
| base::basename |
| Manipulate File Paths |
| base::bessel |
| Bessel Functions |
| base::.bincode |
| Bin a Numeric Vector |
| base::bindenv |
| Binding and Environment Locking, Active Bindings |
| base::bitwNot |
| Bitwise Logical Operations |
| base::body |
| Access to and Manipulation of the Body of a Function |
| base::bquote |
| Partial substitution in expressions |
| base::browser |
| Environment Browser |
| base::browserText |
| Functions to Retrieve Values Supplied by Calls to the Browser |
| base::builtins |
| Returns the Names of All Built-in Objects |
| base::by |
| Apply a Function to a Data Frame Split by Factors |
| base::c |
| Combine Values into a Vector or List |
| base::call |
| Function Calls |
| base::callCC |
| Call With Current Continuation |
| base::.Call |
| Modern Interfaces to C/C++ code |
| base::capabilities |
| Report Capabilities of this Build of R |
| base::cat |
| Concatenate and Print |
| base::cbind |
| Combine R Objects by Rows or Columns |
| base::char.expand |
| Expand a String with Respect to a Target Table |
| base::character |
| Character Vectors |
| base::charmatch |
| Partial String Matching |
| base::chartr |
| Character Translation and Casefolding |
| base::chkDots |
| Warn About Extraneous Arguments in the "..." of Its Caller |
| base::chol |
| The Cholesky Decomposition |
| base::chol2inv |
| Inverse from Cholesky (or QR) Decomposition |
| base::class |
| Object Classes |
| base::col |
| Column Indexes |
| base::rownames |
| Row and Column Names |
| base::: |
| Colon Operator |
| base::colSums |
| Form Row and Column Sums and Means |
| base::commandArgs |
| Extract Command Line Arguments |
| base::comment |
| Query or Set a '"comment"' Attribute |
| base::< |
| Relational Operators |
| base::complex |
| Complex Numbers and Basic Functionality |
| base::conditions |
| Condition Handling and Recovery |
| base::conflicts |
| Search for Masked Objects on the Search Path |
| base::connections |
| Functions to Manipulate Connections (Files, URLs, ...) |
| base::Constants |
| Built-in Constants |
| base::contributors |
| R Project Contributors |
| base::Control |
| Control Flow |
| base::copyright |
| Copyrights of Files Used to Build R |
| base::crossprod |
| Matrix Crossproduct |
| base::Cstack_info |
| Report Information on C Stack Size and Usage |
| base::cumsum |
| Cumulative Sums, Products, and Extremes |
| base::cut.POSIXt |
| Convert a Date or Date-Time Object to a Factor |
| base::cut |
| Convert Numeric to Factor |
| base::data.class |
| Object Classes |
| base::data.frame |
| Data Frames |
| base::data.matrix |
| Convert a Data Frame to a Numeric Matrix |
| base::date |
| System Date and Time |
| base::Date |
| Date Class |
| base::DateTimeClasses |
| Date-Time Classes |
| base::read.dcf |
| Read and Write Data in DCF Format |
| base::debug |
| Debug a Function |
| base::Defunct |
| Marking Objects as Defunct |
| base::delayedAssign |
| Delay Evaluation and Promises |
| base::deparse |
| Expression Deparsing |
| base::.deparseOpts |
| Options for Expression Deparsing |
| base::Deprecated |
| Marking Objects as Deprecated |
| base::det |
| Calculate the Determinant of a Matrix |
| base::detach |
| Detach Objects from the Search Path |
| base::.Device |
| Lists of Open/Active Graphics Devices |
| base::diag |
| Matrix Diagonals |
| base::diff |
| Lagged Differences |
| base::difftime |
| Time Intervals / Differences |
| base::dim |
| Dimensions of an Object |
| base::dimnames |
| Dimnames of an Object |
| base::do.call |
| Execute a Function Call |
| base::dontCheck |
| Identity Function to Suppress Checking |
| base::dots |
| ..., '..1', etc used in Functions |
| base::double |
| Double-Precision Vectors |
| base::dput |
| Write an Object to a File or Recreate it |
| base::drop |
| Drop Redundant Extent Information |
| base::droplevels |
| Drop Unused Levels from Factors |
| base::dump |
| Text Representations of R Objects |
| base::duplicated |
| Determine Duplicate Elements |
| base::dyn.load |
| Foreign Function Interface |
| base::eapply |
| Apply a Function Over Values in an Environment |
| base::eigen |
| Spectral Decomposition of a Matrix |
| base::encodeString |
| Encode Character Vector as for Printing |
| base::Encoding |
| Read or Set the Declared Encodings for a Character Vector |
| base::environment |
| Environment Access |
| base::environment variables |
| Environment Variables |
| base::eval |
| Evaluate an (Unevaluated) Expression |
| base::exists |
| Is an Object Defined? |
| base::expand.grid |
| Create a Data Frame from All Combinations of Factor Variables |
| base::expression |
| Unevaluated Expressions |
| base::[.data.frame |
| Extract or Replace Parts of a Data Frame |
| base::[.factor |
| Extract or Replace Parts of a Factor |
| base::Extract |
| Extract or Replace Parts of an Object |
| base::max |
| Maxima and Minima |
| base::factor |
| Factors |
| base::file.access |
| Ascertain File Accessibility |
| base::file.choose |
| Choose a File Interactively |
| base::file.info |
| Extract File Information |
| base::file.path |
| Construct Path to File |
| base::file.show |
| Display One or More Text Files |
| base::files |
| File Manipulation |
| base::dir.create |
| Manipulation of Directories and File Permissions |
| base::find.package |
| Find Packages |
| base::findInterval |
| Find Interval Numbers or Indices |
| base::force |
| Force Evaluation of an Argument |
| base::forceAndCall |
| Call a function with Some Arguments Forced |
| base::Foreign |
| Foreign Function Interface |
| base::formals |
| Access to and Manipulation of the Formal Arguments |
| base::format.info |
| format(.) Information |
| base::format.pval |
| Format P Values |
| base::format |
| Encode in a Common Format |
| base::formatC |
| Formatting Using C-style Formats |
| base::formatDL |
| Format Description Lists |
| base::function |
| Function Definition |
| base::Filter |
| Common Higher-Order Functions in Functional Programming Languages |
| base::gc |
| Garbage Collection |
| base::gc.time |
| Report Time Spent in Garbage Collection |
| base::gctorture |
| Torture Garbage Collector |
| base::get |
| Return the Value of a Named Object |
| base::getDLLRegisteredRoutines |
| Reflectance Information for C/Fortran routines in a DLL |
| base::getLoadedDLLs |
| Get DLLs Loaded in Current Session |
| base::getNativeSymbolInfo |
| Obtain a Description of one or more Native (C/Fortran) Symbols |
| base::gettext |
| Translate Text Messages |
| base::getwd |
| Get or Set Working Directory |
| base::gl |
| Generate Factor Levels |
| base::grep |
| Pattern Matching and Replacement |
| base::grepRaw |
| Pattern Matching for Raw Vectors |
| base::S3groupGeneric |
| S3 Group Generic Functions |
| base::grouping |
| Grouping Permutation |
| base::gzcon |
| (De)compress I/O Through Connections |
| base::as.hexmode |
| Integer Numbers Displayed in Hexadecimal |
| base::cosh |
| Hyperbolic Functions |
| base::iconv |
| Convert Character Vector between Encodings |
| base::icuSetCollate |
| Setup Collation by ICU |
| base::identical |
| Test Objects for Exact Equality |
| base::identity |
| Identity Function |
| base::ifelse |
| Conditional Element Selection |
| base::integer |
| Integer Vectors |
| base::interaction |
| Compute Factor Interactions |
| base::interactive |
| Is R Running Interactively? |
| base::.Internal |
| Call an Internal Function |
| base::InternalMethods |
| Internal Generic Functions |
| base::invisible |
| Change the Print Mode to Invisible |
| base::is.finite |
| Finite, Infinite and NaN Numbers |
| base::is.function |
| Is an Object of Type (Primitive) Function? |
| base::is.language |
| Is an Object a Language Object? |
| base::is.object |
| Is an Object 'internally classed'? |
| base::is.atomic |
| Is an Object Atomic or Recursive? |
| base::is.single |
| Is an Object of Single Precision Type? |
| base::is.unsorted |
| Test if an Object is Not Sorted |
| base::ISOdatetime |
| Date-time Conversion Functions from Numeric Representations |
| base::is.R |
| Are we using R, rather than S? |
| base::isS4 |
| Test for an S4 object |
| base::isSymmetric |
| Test if a Matrix or other Object is Symmetric (Hermitian) |
| base::jitter |
| 'Jitter' (Add Noise) to Numbers |
| base::rcond |
| Compute or Estimate the Condition Number of a Matrix |
| base::kronecker |
| Kronecker Products on Arrays |
| base::l10n_info |
| Localization Information |
| base::La_library |
| LAPACK Library |
| base::La_version |
| LAPACK Version |
| base::labels |
| Find Labels from Object |
| base::lapply |
| Apply a Function over a List or Vector |
| base::.Last.value |
| Value of Last Evaluated Expression |
| base::length |
| Length of an Object |
| base::lengths |
| Lengths of List or Vector Elements |
| base::levels |
| Levels Attributes |
| base::.Library |
| Search Paths for Packages |
| base::library.dynam |
| Loading DLLs from Packages |
| base::library |
| Loading/Attaching and Listing of Packages |
| base::license |
| The R License Terms |
| base::list.files |
| List the Files in a Directory/Folder |
| base::list |
| Lists - Generic and Dotted Pairs |
| base::list2DF |
| Create Data Frame From List |
| base::list2env |
| From A List, Build or Add To an Environment |
| base::load |
| Reload Saved Datasets |
| base::locales |
| Query or Set Aspects of the Locale |
| base::log |
| Logarithms and Exponentials |
| base::! |
| Logical Operators |
| base::logical |
| Logical Vectors |
| base::lower.tri |
| Lower and Upper Triangular Part of a Matrix |
| base::ls |
| List Objects |
| base::make.names |
| Make Syntactically Valid Names |
| base::make.unique |
| Make Character Strings Unique |
| base::mapply |
| Apply a Function to Multiple List or Vector Arguments |
| base::marginSums |
| Compute table margins |
| base::mat.or.vec |
| Create a Matrix or a Vector |
| base::match.arg |
| Argument Verification Using Partial Matching |
| base::match.call |
| Argument Matching |
| base::match.fun |
| Extract a Function Specified by Name |
| base::match |
| Value Matching |
| base::abs |
| Miscellaneous Mathematical Functions |
| base::%*% |
| Matrix Multiplication |
| base::matrix |
| Matrices |
| base::max.col |
| Find Maximum Position in Matrix |
| base::mean |
| Arithmetic Mean |
| base::memCompress |
| In-memory Compression and Decompression |
| base::mem.maxVSize |
| Query and Set Heap Size Limits |
| base::Memory-limits |
| Memory Limits in R |
| base::memory.profile |
| Profile the Usage of Cons Cells |
| base::Memory |
| Memory Available for Data Storage |
| base::merge |
| Merge Two Data Frames |
| base::message |
| Diagnostic Messages |
| base::missing |
| Does a Formal Argument have a Value? |
| base::mode |
| The (Storage) Mode of an Object |
| base::NA |
| 'Not Available' / Missing Values |
| base::name |
| Names and Symbols |
| base::names |
| The Names of an Object |
| base::nargs |
| The Number of Arguments to a Function |
| base::nchar |
| Count the Number of Characters (or Bytes or Width) |
| base::nlevels |
| The Number of Levels of a Factor |
| base::noquote |
| Class for 'no quote' Printing of Character Strings |
| base::norm |
| Compute the Norm of a Matrix |
| base::normalizePath |
| Express File Paths in Canonical Form |
| base::NotYetImplemented |
| Not Yet Implemented Functions and Unused Arguments |
| base::nrow |
| The Number of Rows/Columns of an Array |
| base:::: |
| Double Colon and Triple Colon Operators |
| base::.onLoad |
| Hooks for Namespace Events |
| base::attachNamespace |
| Loading and Unloading Name Spaces |
| base::topenv |
| Top Level Environment |
| base::NULL |
| The Null Object |
| base::numeric_version |
| Numeric Versions |
| base::numeric |
| Numeric Vectors |
| base::NumericConstants |
| Numeric Constants |
| base::as.octmode |
| Integer Numbers Displayed in Octal |
| base::on.exit |
| Function Exit Code |
| base::+.Date |
| Operators on the Date Class |
| base::options |
| Options Settings |
| base::order |
| Ordering Permutation |
| base::outer |
| Outer Product of Arrays |
| base::Paren |
| Parentheses and Braces |
| base::parse |
| Parse R Expressions |
| base::paste |
| Concatenate Strings |
| base::path.expand |
| Expand File Paths |
| base::|> |
| Forward Pipe Operator |
| base::.Platform |
| Platform Specific Variables |
| base::plot |
| Generic X-Y Plotting |
| base::pmatch |
| Partial String Matching |
| base::polyroot |
| Find Zeros of a Real or Complex Polynomial |
| base::pos.to.env |
| Convert Positions in the Search Path to Environments |
| base::pretty |
| Pretty Breakpoints |
| base::.Primitive |
| Look Up a Primitive Function |
| base::print.data.frame |
| Printing Data Frames |
| base::print.default |
| Default Printing |
| base::print |
| Print Values |
| base::prmatrix |
| Print Matrices, Old-style |
| base::proc.time |
| Running Time of R |
| base::prod |
| Product of Vector Elements |
| base::proportions |
| Express Table Entries as Fraction of Marginal Table |
| base::pushBack |
| Push Text Back on to a Connection |
| base::qr |
| The QR Decomposition of a Matrix |
| base::qr.X |
| Reconstruct the Q, R, or X Matrices from a QR Object |
| base::quit |
| Terminate an R Session |
| base::Quotes |
| Quotes |
| base::Random.user |
| User-supplied Random Number Generation |
| base::Random |
| Random Number Generation |
| base::range |
| Range of Values |
| base::rank |
| Sample Ranks |
| base::rapply |
| Recursively Apply a Function to a List |
| base::raw |
| Raw Vectors |
| base::rawConnection |
| Raw Connections |
| base::charToRaw |
| Convert to or from (Bit/Packed) Raw Vectors |
| base::Rdconv |
| Utilities for Processing Rd Files |
| base::readBin |
| Transfer Binary Data To and From Connections |
| base::readChar |
| Transfer Character Strings To and From Connections |
| base::readline |
| Read a Line from the Terminal |
| base::readLines |
| Read Text Lines from a Connection |
| base::readRDS |
| Serialization Interface for Single Objects |
| base::readRenviron |
| Set Environment Variables from a File |
| base::Recall |
| Recursive Calling |
| base::reg.finalizer |
| Finalization of Objects |
| base::regex |
| Regular Expressions as used in R |
| base::regmatches |
| Extract or Replace Matched Substrings |
| base::rep |
| Replicate Elements of Vectors and Lists |
| base::replace |
| Replace Values in a Vector |
| base::Reserved |
| Reserved Words in R |
| base::rev |
| Reverse Elements |
| base::R.home |
| Return the R Home Directory |
| base::rle |
| Run Length Encoding |
| base::rm |
| Remove Objects from a Specified Environment |
| base::round.POSIXt |
| Round / Truncate Date-Time Objects |
| base::ceiling |
| Rounding of Numbers |
| base::row.names |
| Get and Set Row Names for Data Frames |
| base::row |
| Row Indexes |
| base::rowsum |
| Give Column Sums of a Matrix or Data Frame, Based on a Grouping Variable |
| base::sample |
| Random Samples and Permutations |
| base::save |
| Save R Objects |
| base::scale |
| Scaling and Centering of Matrix-like Objects |
| base::scan |
| Read Data Values |
| base::search |
| Give Search Path for R Objects |
| base::seek |
| Functions to Reposition Connections |
| base::seq.Date |
| Generate Regular Sequences of Dates |
| base::seq.POSIXt |
| Generate Regular Sequences of Times |
| base::seq |
| Sequence Generation |
| base::sequence |
| Create A Vector of Sequences |
| base::serialize |
| Simple Serialization Interface |
| base::union |
| Set Operations |
| base::setTimeLimit |
| Set CPU and/or Elapsed Time Limits |
| base::showConnections |
| Display Connections |
| base::shQuote |
| Quote Strings for Use in OS Shells |
| base::sign |
| Sign Function |
| base::sink |
| Send R Output to a File |
| base::slice.index |
| Slice Indexes in an Array |
| base::@ |
| Extract or Replace A Slot |
| base::socketSelect |
| Wait on Socket Connections |
| base::solve |
| Solve a System of Equations |
| base::sort |
| Sorting or Ordering Vectors |
| base::source |
| Read R Code from a File, a Connection or Expressions |
| base::Special |
| Special Functions of Mathematics |
| base::split |
| Divide into Groups and Reassemble |
| base::sprintf |
| Use C-style String Formatting Commands |
| base::sQuote |
| Quote Text |
| base::srcfile |
| References to Source Files and Code |
| base::StackOverflows |
| Stack Overflow Errors |
| base::standardGeneric |
| Formal Method System - Dispatching S4 Methods |
| base::endsWith |
| Does String Start or End With Another String? |
| base::Startup |
| Initialization at Start of an R Session |
| base::stop |
| Stop Function Execution |
| base::stopifnot |
| Ensure the Truth of R Expressions |
| base::format.POSIXct |
| Date-time Conversion Functions to and from Character |
| base::strrep |
| Repeat the Elements of a Character Vector |
| base::strsplit |
| Split the Elements of a Character Vector |
| base::strtoi |
| Convert Strings to Integers |
| base::strtrim |
| Trim Character Strings to Specified Display Widths |
| base::structure |
| Attribute Specification |
| base::strwrap |
| Wrap Character Strings to Format Paragraphs |
| base::subset |
| Subsetting Vectors, Matrices and Data Frames |
| base::substitute |
| Substituting and Quoting Expressions |
| base::substr |
| Substrings of a Character Vector |
| base::sum |
| Sum of Vector Elements |
| base::summary |
| Object Summaries |
| base::svd |
| Singular Value Decomposition of a Matrix |
| base::sweep |
| Sweep out Array Summaries |
| base::switch |
| Select One of a List of Alternatives |
| base::Syntax |
| Operator Syntax and Precedence |
| base::Sys.getenv |
| Get Environment Variables |
| base::Sys.getpid |
| Get the Process ID of the R Session |
| base::Sys.glob |
| Wildcard Expansion on File Paths |
| base::Sys.info |
| Extract System and User Information |
| base::localeconv |
| Find Details of the Numerical and Monetary Representations in the Current Locale |
| base::sys.parent |
| Functions to Access the Function Call Stack |
| base::Sys.readlink |
| Read File Symbolic Links |
| base::Sys.setenv |
| Set or Unset Environment Variables |
| base::Sys.setFileTime |
| Set File Time |
| base::Sys.sleep |
| Suspend Execution for a Time Interval |
| base::sys.source |
| Parse and Evaluate Expressions from a File |
| base::Sys.time |
| Get Current Date and Time |
| base::Sys.which |
| Find Full Paths to Executables |
| base::system.file |
| Find Names of R System Files |
| base::system |
| Invoke a System Command |
| base::system.time |
| CPU Time Used |
| base::system2 |
| Invoke a System Command |
| base::t |
| Matrix Transpose |
| base::table |
| Cross Tabulation and Table Creation |
| base::tabulate |
| Tabulation for Vectors |
| base::tapply |
| Apply a Function Over a Ragged Array |
| base::addTaskCallback |
| Add or Remove a Top-Level Task Callback |
| base::taskCallbackManager |
| Create an R-level Task Callback Manager |
| base::getTaskCallbackNames |
| Query the Names of the Current Internal Top-Level Task Callbacks |
| base::tempfile |
| Create Names for Temporary Files |
| base::textConnection |
| Text Connections |
| base::~ |
| Tilde Operator |
| base::Sys.timezone |
| Time Zones |
| base::toString |
| Convert an R Object to a Character String |
| base::trace |
| Interactive Tracing and Debugging of Calls to a Function or Method |
| base::traceback |
| Get and Print Call Stacks |
| base::tracemem |
| Trace Copying of Objects |
| base::transform |
| Transform an Object, for Example a Data Frame |
| base::Trig |
| Trigonometric Functions |
| base::trimws |
| Remove Leading/Trailing Whitespace |
| base::try |
| Try an Expression Allowing Error Recovery |
| base::typeof |
| The Type of an Object |
| base::unique |
| Extract Unique Elements |
| base::unlink |
| Delete Files and Directories |
| base::unlist |
| Flatten Lists |
| base::unname |
| Remove 'names' or 'dimnames' |
| base::UseMethod |
| Class Methods |
| base::getHook |
| Functions to Get and Set Hooks for Load, Attach, Detach and Unload |
| base::utf8ToInt |
| Convert Integer Vectors to or from UTF-8-encoded Character Vectors |
| base::file path encoding |
| File Paths not in the Native Encoding |
| base::vector |
| Vectors - Creation, Coercion, etc |
| base::Vectorize |
| Vectorize a Scalar Function |
| base::R.Version |
| Version Information |
| base::warning |
| Warning Messages |
| base::warnings |
| Print Warning Messages |
| base::weekdays |
| Extract Parts of a POSIXt or Date Object |
| base::which.min |
| Where is the Min() or Max() or first TRUE or FALSE ? |
| base::which |
| Which indices are TRUE? |
| base::with |
| Evaluate an Expression in a Data Environment |
| base::withVisible |
| Return both a Value and its Visibility |
| base::write |
| Write Data to a File |
| base::writeLines |
| Write Lines to a Connection |
| base::xtfrm |
| Auxiliary Function for Sorting and Ranking |
| base::zapsmall |
| Rounding of Numbers: Zapping Small Ones to Zero |
| base::.Machine |
| Numerical Characteristics of the Machine |
| base::.packages |
| Listing of Packages |
| base::.Script |
| Scripting Language Interface |
| base::.standard_regexps |
| Miscellaneous Internal/Programming Utilities |
| base::Signals |
| Interrupting Execution of R |
| boot::EEF.profile |
| Empirical Likelihoods |
| boot::Imp.Estimates |
| Importance Sampling Estimates |
| boot::abc.ci |
| Nonparametric ABC Confidence Intervals |
| boot::acme |
| Monthly Excess Returns |
| boot::aids |
| Delay in AIDS Reporting in England and Wales |
| boot::aircondit |
| Failures of Air-conditioning Equipment |
| boot::amis |
| Car Speeding and Warning Signs |
| boot::aml |
| Remission Times for Acute Myelogenous Leukaemia |
| boot::beaver |
| Beaver Body Temperature Data |
| boot::bigcity |
| Population of U.S. Cities |
| boot::boot |
| Bootstrap Resampling |
| boot::boot.array |
| Bootstrap Resampling Arrays |
| boot::boot.ci |
| Nonparametric Bootstrap Confidence Intervals |
| boot::brambles |
| Spatial Location of Bramble Canes |
| boot::breslow |
| Smoking Deaths Among Doctors |
| boot::calcium |
| Calcium Uptake Data |
| boot::cane |
| Sugar-cane Disease Data |
| boot::capability |
| Simulated Manufacturing Process Data |
| boot::catsM |
| Weight Data for Domestic Cats |
| boot::cav |
| Position of Muscle Caveolae |
| boot::cd4 |
| CD4 Counts for HIV-Positive Patients |
| boot::cd4.nested |
| Nested Bootstrap of cd4 data |
| boot::censboot |
| Bootstrap for Censored Data |
| boot::channing |
| Channing House Data |
| boot::claridge |
| Genetic Links to Left-handedness |
| boot::cloth |
| Number of Flaws in Cloth |
| boot::co.transfer |
| Carbon Monoxide Transfer |
| boot::coal |
| Dates of Coal Mining Disasters |
| boot::control |
| Control Variate Calculations |
| boot::corr |
| Correlation Coefficient |
| boot::cum3 |
| Calculate Third Order Cumulants |
| boot::cv.glm |
| Cross-validation for Generalized Linear Models |
| boot::darwin |
| Darwin's Plant Height Differences |
| boot::dogs |
| Cardiac Data for Domestic Dogs |
| boot::downs.bc |
| Incidence of Down's Syndrome in British Columbia |
| boot::ducks |
| Behavioral and Plumage Characteristics of Hybrid Ducks |
| boot::empinf |
| Empirical Influence Values |
| boot::envelope |
| Confidence Envelopes for Curves |
| boot::exp.tilt |
| Exponential Tilting |
| boot::fir |
| Counts of Balsam-fir Seedlings |
| boot::freq.array |
| Bootstrap Frequency Arrays |
| boot::frets |
| Head Dimensions in Brothers |
| boot::glm.diag |
| Generalized Linear Model Diagnostics |
| boot::glm.diag.plots |
| Diagnostics plots for generalized linear models |
| boot::gravity |
| Acceleration Due to Gravity |
| boot::hirose |
| Failure Time of PET Film |
| boot::imp.weights |
| Importance Sampling Weights |
| boot::inv.logit |
| Inverse Logit Function |
| boot::islay |
| Jura Quartzite Azimuths on Islay |
| boot::jack.after.boot |
| Jackknife-after-Bootstrap Plots |
| boot::k3.linear |
| Linear Skewness Estimate |
| boot::linear.approx |
| Linear Approximation of Bootstrap Replicates |
| boot::lines.saddle.distn |
| Add a Saddlepoint Approximation to a Plot |
| boot::logit |
| Logit of Proportions |
| boot::manaus |
| Average Heights of the Rio Negro river at Manaus |
| boot::melanoma |
| Survival from Malignant Melanoma |
| boot::motor |
| Data from a Simulated Motorcycle Accident |
| boot::neuro |
| Neurophysiological Point Process Data |
| boot::nitrofen |
| Toxicity of Nitrofen in Aquatic Systems |
| boot::nodal |
| Nodal Involvement in Prostate Cancer |
| boot::norm.ci |
| Normal Approximation Confidence Intervals |
| boot::nuclear |
| Nuclear Power Station Construction Data |
| boot::paulsen |
| Neurotransmission in Guinea Pig Brains |
| boot::plot.boot |
| Plots of the Output of a Bootstrap Simulation |
| boot::poisons |
| Animal Survival Times |
| boot::polar |
| Pole Positions of New Caledonian Laterites |
| boot::print.boot |
| Print a Summary of a Bootstrap Object |
| boot::print.bootci |
| Print Bootstrap Confidence Intervals |
| boot::print.saddle.distn |
| Print Quantiles of Saddlepoint Approximations |
| boot::print.simplex |
| Print Solution to Linear Programming Problem |
| boot::remission |
| Cancer Remission and Cell Activity |
| boot::saddle |
| Saddlepoint Approximations for Bootstrap Statistics |
| boot::saddle.distn |
| Saddlepoint Distribution Approximations for Bootstrap Statistics |
| boot::saddle.distn.object |
| Saddlepoint Distribution Approximation Objects |
| boot::salinity |
| Water Salinity and River Discharge |
| boot::simplex |
| Simplex Method for Linear Programming Problems |
| boot::simplex.object |
| Linear Programming Solution Objects |
| boot::smooth.f |
| Smooth Distributions on Data Points |
| boot::sunspot |
| Annual Mean Sunspot Numbers |
| boot::survival |
| Survival of Rats after Radiation Doses |
| boot::tau |
| Tau Particle Decay Modes |
| boot::tilt.boot |
| Non-parametric Tilted Bootstrap |
| boot::tsboot |
| Bootstrapping of Time Series |
| boot::tuna |
| Tuna Sighting Data |
| boot::urine |
| Urine Analysis Data |
| boot::var.linear |
| Linear Variance Estimate |
| boot::wool |
| Australian Relative Wool Prices |
| class::SOM |
| Self-Organizing Maps: Online Algorithm |
| class::batchSOM |
| Self-Organizing Maps: Batch Algorithm |
| class::condense |
| Condense training set for k-NN classifier |
| class::knn |
| k-Nearest Neighbour Classification |
| class::knn.cv |
| k-Nearest Neighbour Cross-Validatory Classification |
| class::knn1 |
| 1-Nearest Neighbour Classification |
| class::lvq1 |
| Learning Vector Quantization 1 |
| class::lvq2 |
| Learning Vector Quantization 2.1 |
| class::lvq3 |
| Learning Vector Quantization 3 |
| class::lvqinit |
| Initialize a LVQ Codebook |
| class::lvqtest |
| Classify Test Set from LVQ Codebook |
| class::multiedit |
| Multiedit for k-NN Classifier |
| class::olvq1 |
| Optimized Learning Vector Quantization 1 |
| class::reduce.nn |
| Reduce Training Set for a k-NN Classifier |
| class::somgrid |
| Plot SOM Fits |
| cluster::agnes |
| Agglomerative Nesting (Hierarchical Clustering) |
| cluster::agnes.object |
| Agglomerative Nesting (AGNES) Object |
| cluster::agriculture |
| European Union Agricultural Workforces |
| cluster::animals |
| Attributes of Animals |
| cluster::bannerplot |
| Plot Banner (of Hierarchical Clustering) |
| cluster::chorSub |
| Subset of C-horizon of Kola Data |
| cluster::clara |
| Clustering Large Applications |
| cluster::clara.object |
| Clustering Large Applications (CLARA) Object |
| cluster::clusGap |
| Gap Statistic for Estimating the Number of Clusters |
| cluster::clusplot.default |
| Bivariate Cluster Plot (clusplot) Default Method |
| cluster::clusplot |
| Bivariate Cluster Plot (of a Partitioning Object) |
| cluster::coefHier |
| Agglomerative / Divisive Coefficient for 'hclust' Objects |
| cluster::daisy |
| Dissimilarity Matrix Calculation |
| cluster::diana |
| DIvisive ANAlysis Clustering |
| cluster::dissimilarity.object |
| Dissimilarity Matrix Object |
| cluster::ellipsoidhull |
| Compute the Ellipsoid Hull or Spanning Ellipsoid of a Point Set |
| cluster::fanny |
| Fuzzy Analysis Clustering |
| cluster::fanny.object |
| Fuzzy Analysis (FANNY) Object |
| cluster::flower |
| Flower Characteristics |
| cluster::lower.to.upper.tri.inds |
| Permute Indices for Triangular Matrices |
| cluster::medoids |
| Compute 'pam'-consistent Medoids from Clustering |
| cluster::mona |
| MONothetic Analysis Clustering of Binary Variables |
| cluster::mona.object |
| Monothetic Analysis (MONA) Object |
| cluster::pam |
| Partitioning Around Medoids |
| cluster::pam.object |
| Partitioning Around Medoids (PAM) Object |
| cluster::partition |
| Partitioning Object |
| cluster::plantTraits |
| Plant Species Traits Data |
| cluster::plot.agnes |
| Plots of an Agglomerative Hierarchical Clustering |
| cluster::plot.diana |
| Plots of a Divisive Hierarchical Clustering |
| cluster::plot.mona |
| Banner of Monothetic Divisive Hierarchical Clusterings |
| cluster::plot.partition |
| Plot of a Partition of the Data Set |
| cluster::pltree |
| Plot Clustering Tree of a Hierarchical Clustering |
| cluster::pluton |
| Isotopic Composition Plutonium Batches |
| cluster::predict.ellipsoid |
| Predict Method for Ellipsoid Objects |
| cluster::print.agnes |
| Print Method for AGNES Objects |
| cluster::print.clara |
| Print Method for CLARA Objects |
| cluster::print.diana |
| Print Method for DIANA Objects |
| cluster::print.dissimilarity |
| Print and Summary Methods for Dissimilarity Objects |
| cluster::print.fanny |
| Print and Summary Methods for FANNY Objects |
| cluster::print.mona |
| Print Method for MONA Objects |
| cluster::print.pam |
| Print Method for PAM Objects |
| cluster::ruspini |
| Ruspini Data |
| cluster::silhouette |
| Compute or Extract Silhouette Information from Clustering |
| cluster::sizeDiss |
| Sample Size of Dissimilarity Like Object |
| cluster::summary.agnes |
| Summary Method for 'agnes' Objects |
| cluster::summary.clara |
| Summary Method for 'clara' Objects |
| cluster::summary.diana |
| Summary Method for 'diana' Objects |
| cluster::summary.mona |
| Summary Method for 'mona' Objects |
| cluster::summary.pam |
| Summary Method for PAM Objects |
| cluster::twins.object |
| Hierarchical Clustering Object |
| cluster::volume |
| Compute the Volume (of an Ellipsoid) |
| cluster::votes.repub |
| Votes for Republican Candidate in Presidential Elections |
| cluster::xclara |
| Bivariate Data Set with 3 Clusters |
| codetools::checkUsage |
| Check R Code for Possible Problems |
| codetools::codetools |
| Low Level Code Analysis Tools for R |
| codetools::findGlobals |
| Find Global Functions and Variables Used by a Closure |
| codetools::showTree |
| Print Lisp-Style Representation of R Expression |
| compiler::compile |
| Byte Code Compiler |
| datasets::ability.cov |
| Ability and Intelligence Tests |
| datasets::airmiles |
| Passenger Miles on Commercial US Airlines, 1937-1960 |
| datasets::AirPassengers |
| Monthly Airline Passenger Numbers 1949-1960 |
| datasets::airquality |
| New York Air Quality Measurements |
| datasets::anscombe |
| Anscombe's Quartet of 'Identical' Simple Linear Regressions |
| datasets::attenu |
| The Joyner-Boore Attenuation Data |
| datasets::attitude |
| The Chatterjee-Price Attitude Data |
| datasets::austres |
| Quarterly Time Series of the Number of Australian Residents |
| datasets::beavers |
| Body Temperature Series of Two Beavers |
| datasets::BJsales |
| Sales Data with Leading Indicator |
| datasets::BOD |
| Biochemical Oxygen Demand |
| datasets::cars |
| Speed and Stopping Distances of Cars |
| datasets::ChickWeight |
| Weight versus age of chicks on different diets |
| datasets::chickwts |
| Chicken Weights by Feed Type |
| datasets::co2 |
| Mauna Loa Atmospheric CO2 Concentration |
| datasets::crimtab |
| Student's 3000 Criminals Data |
| datasets::datasets-package |
| The R Datasets Package |
| datasets::discoveries |
| Yearly Numbers of Important Discoveries |
| datasets::DNase |
| Elisa assay of DNase |
| datasets::esoph |
| Smoking, Alcohol and (O)esophageal Cancer |
| datasets::euro |
| Conversion Rates of Euro Currencies |
| datasets::eurodist |
| Distances Between European Cities and Between US Cities |
| datasets::EuStockMarkets |
| Daily Closing Prices of Major European Stock Indices, 1991-1998 |
| datasets::faithful |
| Old Faithful Geyser Data |
| datasets::Formaldehyde |
| Determination of Formaldehyde |
| datasets::freeny |
| Freeny's Revenue Data |
| datasets::HairEyeColor |
| Hair and Eye Color of Statistics Students |
| datasets::Harman23.cor |
| Harman Example 2.3 |
| datasets::Harman74.cor |
| Harman Example 7.4 |
| datasets::Indometh |
| Pharmacokinetics of Indomethacin |
| datasets::infert |
| Infertility after Spontaneous and Induced Abortion |
| datasets::InsectSprays |
| Effectiveness of Insect Sprays |
| datasets::iris |
| Edgar Anderson's Iris Data |
| datasets::islands |
| Areas of the World's Major Landmasses |
| datasets::JohnsonJohnson |
| Quarterly Earnings per Johnson & Johnson Share |
| datasets::LakeHuron |
| Level of Lake Huron 1875-1972 |
| datasets::lh |
| Luteinizing Hormone in Blood Samples |
| datasets::LifeCycleSavings |
| Intercountry Life-Cycle Savings Data |
| datasets::Loblolly |
| Growth of Loblolly pine trees |
| datasets::longley |
| Longley's Economic Regression Data |
| datasets::lynx |
| Annual Canadian Lynx trappings 1821-1934 |
| datasets::morley |
| Michelson Speed of Light Data |
| datasets::mtcars |
| Motor Trend Car Road Tests |
| datasets::nhtemp |
| Average Yearly Temperatures in New Haven |
| datasets::Nile |
| Flow of the River Nile |
| datasets::nottem |
| Average Monthly Temperatures at Nottingham, 1920-1939 |
| datasets::npk |
| Classical N, P, K Factorial Experiment |
| datasets::occupationalStatus |
| Occupational Status of Fathers and their Sons |
| datasets::Orange |
| Growth of Orange Trees |
| datasets::OrchardSprays |
| Potency of Orchard Sprays |
| datasets::PlantGrowth |
| Results from an Experiment on Plant Growth |
| datasets::precip |
| Annual Precipitation in US Cities |
| datasets::presidents |
| Quarterly Approval Ratings of US Presidents |
| datasets::pressure |
| Vapor Pressure of Mercury as a Function of Temperature |
| datasets::Puromycin |
| Reaction Velocity of an Enzymatic Reaction |
| datasets::quakes |
| Locations of Earthquakes off Fiji |
| datasets::randu |
| Random Numbers from Congruential Generator RANDU |
| datasets::rivers |
| Lengths of Major North American Rivers |
| datasets::rock |
| Measurements on Petroleum Rock Samples |
| datasets::sleep |
| Student's Sleep Data |
| datasets::stackloss |
| Brownlee's Stack Loss Plant Data |
| datasets::state |
| US State Facts and Figures |
| datasets::sunspot.month |
| Monthly Sunspot Data, from 1749 to "Present" |
| datasets::sunspot.year |
| Yearly Sunspot Data, 1700-1988 |
| datasets::sunspots |
| Monthly Sunspot Numbers, 1749-1983 |
| datasets::swiss |
| Swiss Fertility and Socioeconomic Indicators (1888) Data |
| datasets::Theoph |
| Pharmacokinetics of Theophylline |
| datasets::Titanic |
| Survival of passengers on the Titanic |
| datasets::ToothGrowth |
| The Effect of Vitamin C on Tooth Growth in Guinea Pigs |
| datasets::treering |
| Yearly Treering Data, -6000-1979 |
| datasets::trees |
| Diameter, Height and Volume for Black Cherry Trees |
| datasets::UCBAdmissions |
| Student Admissions at UC Berkeley |
| datasets::UKDriverDeaths |
| Road Casualties in Great Britain 1969-84 |
| datasets::UKgas |
| UK Quarterly Gas Consumption |
| datasets::UKLungDeaths |
| Monthly Deaths from Lung Diseases in the UK |
| datasets::USAccDeaths |
| Accidental Deaths in the US 1973-1978 |
| datasets::USArrests |
| Violent Crime Rates by US State |
| datasets::USJudgeRatings |
| Lawyers' Ratings of State Judges in the US Superior Court |
| datasets::USPersonalExpenditure |
| Personal Expenditure Data |
| datasets::uspop |
| Populations Recorded by the US Census |
| datasets::VADeaths |
| Death Rates in Virginia (1940) |
| datasets::volcano |
| Topographic Information on Auckland's Maunga Whau Volcano |
| datasets::warpbreaks |
| The Number of Breaks in Yarn during Weaving |
| datasets::women |
| Average Heights and Weights for American Women |
| datasets::WorldPhones |
| The World's Telephones |
| datasets::WWWusage |
| Internet Usage per Minute |
| datasets::CO2 |
| Carbon Dioxide Uptake in Grass Plants |
| foreign::lookup.xport |
| Lookup Information on a SAS XPORT Format Library |
| foreign::data.restore |
| Read an S3 Binary or data.dump File |
| foreign::read.arff |
| Read Data from ARFF Files |
| foreign::read.dbf |
| Read a DBF File |
| foreign::read.dta |
| Read Stata Binary Files |
| foreign::read.epiinfo |
| Read Epi Info Data Files |
| foreign::read.mtp |
| Read a Minitab Portable Worksheet |
| foreign::read.octave |
| Read Octave Text Data Files |
| foreign::read.spss |
| Read an SPSS Data File |
| foreign::read.ssd |
| Obtain a Data Frame from a SAS Permanent Dataset, via read.xport |
| foreign::read.systat |
| Obtain a Data Frame from a Systat File |
| foreign::read.xport |
| Read a SAS XPORT Format Library |
| foreign::write.arff |
| Write Data into ARFF Files |
| foreign::write.dbf |
| Write a DBF File |
| foreign::write.dta |
| Write Files in Stata Binary Format |
| foreign::write.foreign |
| Write Text Files and Code to Read Them |
| graphics::abline |
| Add Straight Lines to a Plot |
| graphics::arrows |
| Add Arrows to a Plot |
| graphics::assocplot |
| Association Plots |
| graphics::axis.POSIXct |
| Date and Date-time Plotting Functions |
| graphics::axis |
| Add an Axis to a Plot |
| graphics::axTicks |
| Compute Axis Tickmark Locations |
| graphics::barplot |
| Bar Plots |
| graphics::box |
| Draw a Box around a Plot |
| graphics::boxplot.matrix |
| Draw a Boxplot for each Column (Row) of a Matrix |
| graphics::boxplot |
| Box Plots |
| graphics::bxp |
| Draw Box Plots from Summaries |
| graphics::cdplot |
| Conditional Density Plots |
| graphics::clip |
| Set Clipping Region |
| graphics::contour |
| Display Contours |
| graphics::grconvertX |
| Convert between Graphics Coordinate Systems |
| graphics::coplot |
| Conditioning Plots |
| graphics::curve |
| Draw Function Plots |
| graphics::dotchart |
| Cleveland's Dot Plots |
| graphics::filled.contour |
| Level (Contour) Plots |
| graphics::fourfoldplot |
| Fourfold Plots |
| graphics::plot.new |
| Create / Start a New Plot Frame |
| graphics::graphics-package |
| The R Graphics Package |
| graphics::grid |
| Add Grid to a Plot |
| graphics::hist.POSIXt |
| Histogram of a Date or Date-Time Object |
| graphics::hist |
| Histograms |
| graphics::identify |
| Identify Points in a Scatter Plot |
| graphics::image |
| Display a Color Image |
| graphics::layout |
| Specifying Complex Plot Arrangements |
| graphics::legend |
| Add Legends to Plots |
| graphics::lines |
| Add Connected Line Segments to a Plot |
| graphics::locator |
| Graphical Input |
| graphics::matplot |
| Plot Columns of Matrices |
| graphics::mosaicplot |
| Mosaic Plots |
| graphics::mtext |
| Write Text into the Margins of a Plot |
| graphics::pairs |
| Scatterplot Matrices |
| graphics::panel.smooth |
| Simple Panel Plot |
| graphics::par |
| Set or Query Graphical Parameters |
| graphics::persp |
| Perspective Plots |
| graphics::pie |
| Pie Charts |
| graphics::plot.data.frame |
| Plot Method for Data Frames |
| graphics::plot.default |
| The Default Scatterplot Function |
| graphics::plot.design |
| Plot Univariate Effects of a Design or Model |
| graphics::plot.factor |
| Plotting Factor Variables |
| graphics::plot.formula |
| Formula Notation for Scatterplots |
| graphics::plot.raster |
| Plotting Raster Images |
| graphics::plot.table |
| Plot Methods for 'table' Objects |
| graphics::plot.window |
| Set up World Coordinates for Graphics Window |
| graphics::plot.xy |
| Basic Internal Plot Function |
| graphics::plot.histogram |
| Plot Histograms |
| graphics::points |
| Add Points to a Plot |
| graphics::polygon |
| Polygon Drawing |
| graphics::polypath |
| Path Drawing |
| graphics::rasterImage |
| Draw One or More Raster Images |
| graphics::rect |
| Draw One or More Rectangles |
| graphics::rug |
| Add a Rug to a Plot |
| graphics::screen |
| Creating and Controlling Multiple Screens on a Single Device |
| graphics::segments |
| Add Line Segments to a Plot |
| graphics::smoothScatter |
| Scatterplots with Smoothed Densities Color Representation |
| graphics::spineplot |
| Spine Plots and Spinograms |
| graphics::stars |
| Star (Spider/Radar) Plots and Segment Diagrams |
| graphics::stem |
| Stem-and-Leaf Plots |
| graphics::stripchart |
| 1-D Scatter Plots |
| graphics::strwidth |
| Plotting Dimensions of Character Strings and Math Expressions |
| graphics::sunflowerplot |
| Produce a Sunflower Scatter Plot |
| graphics::symbols |
| Draw Symbols (Circles, Squares, Stars, Thermometers, Boxplots) |
| graphics::text |
| Add Text to a Plot |
| graphics::title |
| Plot Annotation |
| graphics::xinch |
| Graphical Units |
| graphics::xspline |
| Draw an X-spline |
| graphics::Axis |
| Generic Function to Add an Axis to a Plot |
| grDevices::as.graphicsAnnot |
| Coerce an Object for Graphics Annotation |
| grDevices::is.raster |
| Create a Raster Object |
| grDevices::axisTicks |
| Compute Pretty Axis Tick Scales |
| grDevices::boxplot.stats |
| Box Plot Statistics |
| grDevices::bringToTop |
| Assign Focus to a Window |
| grDevices::svg |
| Cairographics-based SVG, PDF and PostScript Graphics Devices |
| grDevices::cairoSymbolFont |
| Specify a Symbol Font |
| grDevices::check.options |
| Set Options with Consistency Checks |
| grDevices::chull |
| Compute Convex Hull of a Set of Points |
| grDevices::cm |
| Unit Transformation |
| grDevices::col2rgb |
| Color to RGB Conversion |
| grDevices::colorRamp |
| Color interpolation |
| grDevices::colors |
| Color Names |
| grDevices::contourLines |
| Calculate Contour Lines |
| grDevices::convertColor |
| Convert between Colour Spaces |
| grDevices::densCols |
| Colors for Smooth Density Plots |
| grDevices::dev.capabilities |
| Query Capabilities of the Current Graphics Device |
| grDevices::dev.capture |
| Capture device output as a raster image |
| grDevices::dev.hold |
| Hold or Flush Output on an On-Screen Graphics Device. |
| grDevices::dev.interactive |
| Is the Current Graphics Device Interactive? |
| grDevices::dev.cur |
| Control Multiple Devices |
| grDevices::dev.size |
| Find Size of Device Surface |
| grDevices::dev.copy |
| Copy Graphics Between Multiple Devices |
| grDevices::dev2bitmap |
| Graphics Device for Bitmap Files via Ghostscript |
| grDevices::devAskNewPage |
| Prompt before New Page |
| grDevices::Devices |
| List of Graphical Devices |
| grDevices::embedFonts |
| Embed Fonts in PostScript and PDF |
| grDevices::extendrange |
| Extend a Numerical Range by a Small Percentage |
| grDevices::getGraphicsEvent |
| Wait for a mouse or keyboard event from a graphics window |
| grDevices::gray.colors |
| Gray Color Palette |
| grDevices::gray |
| Gray Level Specification |
| grDevices::grDevices-package |
| The R Graphics Devices and Support for Colours and Fonts |
| grDevices::hcl |
| HCL Color Specification |
| grDevices::Hershey |
| Hershey Vector Fonts in R |
| grDevices::hsv |
| HSV Color Specification |
| grDevices::Japanese |
| Japanese characters in R |
| grDevices::make.rgb |
| Create colour spaces |
| grDevices::msgWindow |
| Manipulate a Window |
| grDevices::n2mfrow |
| Compute Default 'mfrow' From Number of Plots |
| grDevices::nclass.Sturges |
| Compute the Number of Classes for a Histogram |
| grDevices::palette |
| Set or View the Graphics Palette |
| grDevices::rainbow |
| Color Palettes |
| grDevices::pdf.options |
| Auxiliary Function to Set/View Defaults for Arguments of pdf |
| grDevices::pdf |
| PDF Graphics Device |
| grDevices::pictex |
| A PicTeX Graphics Driver |
| grDevices::plotmath |
| Mathematical Annotation in R |
| grDevices::postscript |
| PostScript Graphics |
| grDevices::postscriptFonts |
| PostScript and PDF Font Families |
| grDevices::pretty.Date |
| Pretty Breakpoints for Date-Time Classes |
| grDevices::ps.options |
| Auxiliary Function to Set/View Defaults for Arguments of postscript |
| grDevices::quartz |
| macOS Quartz Device |
| grDevices::quartzFont |
| Quartz Fonts Setup |
| grDevices::recordGraphics |
| Record Graphics Operations |
| grDevices::replayPlot |
| Record and Replay Plots |
| grDevices::rgb |
| RGB Color Specification |
| grDevices::rgb2hsv |
| RGB to HSV Conversion |
| grDevices::trans3d |
| 3D to 2D Transformation for Perspective Plots |
| grDevices::Type1Font |
| Type 1 and CID Fonts |
| grDevices::windows.options |
| Auxiliary Function to Set/View Defaults for Arguments of windows() |
| grDevices::windows |
| Windows Graphics Devices |
| grDevices::windowsFont |
| Windows Fonts |
| grDevices::x11 |
| X Window System Graphics (X11) |
| grDevices::X11Font |
| X11 Fonts |
| grDevices::xfig |
| XFig Graphics Device |
| grDevices::xy.coords |
| Extracting Plotting Structures |
| grDevices::xyTable |
| Multiplicities of (x,y) Points, e.g., for a Sunflower Plot |
| grDevices::xyz.coords |
| Extracting Plotting Structures |
| grDevices::png |
| BMP, JPEG, PNG and TIFF graphics devices |
| grDevices::savePlot |
| Save Cairo X11 Plot to File |
| grid::absolute.size |
| Absolute Size of a Grob |
| grid::arrow |
| Describe arrows to add to a line. |
| grid::as.mask |
| Define a Soft Mask |
| grid::calcStringMetric |
| Calculate Metric Information for Text |
| grid::current.viewport |
| Get the Current Grid Viewport (Tree) |
| grid::dataViewport |
| Create a Viewport with Scales based on Data |
| grid::depth |
| Determine the number of levels in an object. |
| grid::deviceLoc |
| Convert Viewport Location to Device Location |
| grid::drawDetails |
| Customising grid Drawing |
| grid::editDetails |
| Customising grid Editing |
| grid::editViewport |
| Modify a Viewport |
| grid::explode |
| Explode a path into its components. |
| grid::gEdit |
| Create and Apply Edit Objects |
| grid::getNames |
| List the names of grobs on the display list |
| grid::gpar |
| Handling Grid Graphical Parameters |
| grid::gPath |
| Concatenate Grob Names |
| grid::grid-package |
| The Grid Graphics Package |
| grid::grid.add |
| Add a Grid Graphical Object |
| grid::grid.bezier |
| Draw a Bezier Curve |
| grid::grid.cap |
| Capture a raster image |
| grid::grid.circle |
| Draw a Circle |
| grid::grid.clip |
| Set the Clipping Region |
| grid::convertUnit |
| Convert Between Different grid Coordinate Systems |
| grid::grid.copy |
| Make a Copy of a Grid Graphical Object |
| grid::grid.curve |
| Draw a Curve Between Locations |
| grid::grid.delay |
| Encapsulate calculations and generating a grob |
| grid::grid.display.list |
| Control the Grid Display List |
| grid::grid.DLapply |
| Modify the Grid Display List |
| grid::grid.draw |
| Draw a grid grob |
| grid::grid.edit |
| Edit the Description of a Grid Graphical Object |
| grid::grid.force |
| Force a grob into its components |
| grid::grid.frame |
| Create a Frame for Packing Objects |
| grid::grid.function |
| Draw a curve representing a function |
| grid::grid.get |
| Get a Grid Graphical Object |
| grid::grid.grab |
| Grab the current grid output |
| grid::grid.grep |
| Search for Grobs and/or Viewports |
| grid::grid.grill |
| Draw a Grill |
| grid::grob |
| Create Grid Graphical Objects, aka "Grob"s |
| grid::grid.group |
| Draw a Group |
| grid::grid.layout |
| Create a Grid Layout |
| grid::grid.lines |
| Draw Lines in a Grid Viewport |
| grid::grid.locator |
| Capture a Mouse Click |
| grid::grid.ls |
| List the names of grobs or viewports |
| grid::grid.move.to |
| Move or Draw to a Specified Position |
| grid::grid.newpage |
| Move to a New Page on a Grid Device |
| grid::grid.null |
| Null Graphical Object |
| grid::grid.pack |
| Pack an Object within a Frame |
| grid::grid.path |
| Draw a Path |
| grid::grid.place |
| Place an Object within a Frame |
| grid::grid.plot.and.legend |
| A Simple Plot and Legend Demo |
| grid::grid.points |
| Draw Data Symbols |
| grid::grid.polygon |
| Draw a Polygon |
| grid::grid.pretty |
| Generate a Sensible ("Pretty") Set of Breakpoints |
| grid::grid.raster |
| Render a raster object |
| grid::Grid |
| Grid Graphics |
| grid::grid.record |
| Encapsulate calculations and drawing |
| grid::grid.rect |
| Draw rectangles |
| grid::grid.refresh |
| Refresh the current grid scene |
| grid::grid.remove |
| Remove a Grid Graphical Object |
| grid::grid.reorder |
| Reorder the children of a gTree |
| grid::roundrect |
| Draw a rectangle with rounded corners |
| grid::grid.segments |
| Draw Line Segments |
| grid::grid.set |
| Set a Grid Graphical Object |
| grid::grid.show.layout |
| Draw a Diagram of a Grid Layout |
| grid::grid.show.viewport |
| Draw a Diagram of a Grid Viewport |
| grid::grid.stroke |
| Stroke or Fill a Path |
| grid::grid.text |
| Draw Text |
| grid::grid.xaxis |
| Draw an X-Axis |
| grid::grid.xspline |
| Draw an Xspline |
| grid::grid.yaxis |
| Draw a Y-Axis |
| grid::gridCoords |
| Create Sets of Coordinates for Grid Grobs |
| grid::grobCoords |
| Calculate Points on the Perimeter of a Grob |
| grid::grobName |
| Generate a Name for a Grob |
| grid::grobWidth |
| Create a Unit Describing the Width of a Grob |
| grid::grobX |
| Create a Unit Describing a Grob Boundary Location |
| grid::legendGrob |
| Constructing a Legend Grob |
| grid::makeContent |
| Customised grid Grobs |
| grid::patterns |
| Define Gradient and Pattern Fills |
| grid::plotViewport |
| Create a Viewport with a Standard Plot Layout |
| grid::resolveRasterSize |
| Utility function to resolve the size of a raster grob |
| grid::showGrob |
| Label grid grobs. |
| grid::showViewport |
| Display grid viewports. |
| grid::stringWidth |
| Create a Unit Describing the Width and Height of a String or Math Expression |
| grid::unit.c |
| Combine Unit Objects |
| grid::unit.length |
| Length of a Unit Object |
| grid::unit.pmin |
| Parallel Unit Minima and Maxima |
| grid::unit |
| Function to Create a Unit Object |
| grid::unit.rep |
| Replicate Elements of Unit Objects |
| grid::unitType |
| Return the Units of a Unit Object |
| grid::valid.just |
| Validate a Justification |
| grid::validDetails |
| Customising grid grob Validation |
| grid::viewport |
| Create a Grid Viewport |
| grid::pushViewport |
| Maintaining and Navigating the Grid Viewport Tree |
| grid::viewportTransform |
| Define a Group Transformation |
| grid::vpPath |
| Concatenate Viewport Names |
| grid::widthDetails |
| Width and Height of a grid grob |
| grid::xDetails |
| Boundary of a grid grob |
| grid::xsplinePoints |
| Return the points that would be used to draw an Xspline (or a Bezier curve). |
| KernSmooth::bkde |
| Compute a Binned Kernel Density Estimate |
| KernSmooth::bkde2D |
| Compute a 2D Binned Kernel Density Estimate |
| KernSmooth::bkfe |
| Compute a Binned Kernel Functional Estimate |
| KernSmooth::dpih |
| Select a Histogram Bin Width |
| KernSmooth::dpik |
| Select a Bandwidth for Kernel Density Estimation |
| KernSmooth::dpill |
| Select a Bandwidth for Local Linear Regression |
| KernSmooth::locpoly |
| Estimate Functions Using Local Polynomials |
| lattice::Lattice |
| Lattice Graphics |
| lattice::Rows |
| Extract rows from a list |
| lattice::USMortality |
| Mortality Rates in US by Cause and Gender |
| lattice::axis.default |
| Default axis annotation utilities |
| lattice::banking |
| Banking |
| lattice::barchart.table |
| table methods for barchart and dotplot |
| lattice::barley |
| Yield data from a Minnesota barley trial |
| lattice::cloud |
| 3d Scatter Plot and Wireframe Surface Plot |
| lattice::draw.colorkey |
| Produce a colorkey typically for levelplot |
| lattice::draw.key |
| Produce a Legend or Key |
| lattice::environmental |
| Atmospheric environmental conditions in New York City |
| lattice::ethanol |
| Engine exhaust fumes from burning ethanol |
| lattice::histogram |
| Histograms and Kernel Density Plots |
| lattice::panel.identify |
| Functions to Interact with Lattice Plots |
| lattice::lattice.options |
| Low-level Options Controlling Behaviour of Lattice |
| lattice::latticeParseFormula |
| Parse Trellis formula |
| lattice::level.colors |
| A function to compute false colors representing a numeric or categorical variable |
| lattice::levelplot |
| Level plots and contour plots |
| lattice::llines |
| Replacements of traditional graphics functions |
| lattice::lset |
| Interface to modify Trellis Settings - Defunct |
| lattice::make.groups |
| Grouped data from multiple vectors |
| lattice::melanoma |
| Melanoma skin cancer incidence |
| lattice::oneway |
| Fit One-way Model |
| lattice::packet.panel.default |
| Associating Packets with Panels |
| lattice::panel.axis |
| Panel Function for Drawing Axis Ticks and Labels |
| lattice::panel.barchart |
| Default Panel Function for barchart |
| lattice::panel.bwplot |
| Default Panel Function for bwplot |
| lattice::panel.cloud |
| Default Panel Function for cloud |
| lattice::panel.densityplot |
| Default Panel Function for densityplot |
| lattice::panel.dotplot |
| Default Panel Function for dotplot |
| lattice::panel.functions |
| Useful Panel Function Components |
| lattice::panel.histogram |
| Default Panel Function for histogram |
| lattice::panel.levelplot |
| Panel Functions for levelplot and contourplot |
| lattice::panel.loess |
| Panel Function to Add a LOESS Smooth |
| lattice::current.row |
| Accessing Auxiliary Information During Plotting |
| lattice::panel.pairs |
| Default Superpanel Function for splom |
| lattice::panel.parallel |
| Default Panel Function for parallel |
| lattice::panel.qqmath |
| Default Panel Function for qqmath |
| lattice::panel.qqmathline |
| Useful panel function with qqmath |
| lattice::panel.smoothScatter |
| Lattice panel function analogous to smoothScatter |
| lattice::panel.spline |
| Panel Function to Add a Spline Smooth |
| lattice::panel.stripplot |
| Default Panel Function for stripplot |
| lattice::panel.superpose |
| Panel Function for Display Marked by groups |
| lattice::panel.violin |
| Panel Function to create Violin Plots |
| lattice::panel.xyplot |
| Default Panel Function for xyplot |
| lattice::prepanel.default.bwplot |
| Default Prepanel Functions |
| lattice::prepanel.lmline |
| Useful Prepanel Function for Lattice |
| lattice::print.trellis |
| Plot and Summarize Trellis Objects |
| lattice::qq |
| Quantile-Quantile Plots of Two Samples |
| lattice::qqmath |
| Q-Q Plot with Theoretical Distribution |
| lattice::rfs |
| Residual and Fit Spread Plots |
| lattice::equal.count |
| shingles |
| lattice::simpleKey |
| Function to generate a simple key |
| lattice::simpleTheme |
| Function to generate a simple theme |
| lattice::singer |
| Heights of New York Choral Society singers |
| lattice::splom |
| Scatter Plot Matrices |
| lattice::strip.default |
| Default Trellis Strip Function |
| lattice::tmd |
| Tukey Mean-Difference Plot |
| lattice::trellis.device |
| Initializing Trellis Displays |
| lattice::trellis.object |
| A Trellis Plot Object |
| lattice::trellis.par.get |
| Graphical Parameters for Trellis Displays |
| lattice::update.trellis |
| Retrieve and Update Trellis Object |
| lattice::utilities.3d |
| Utility functions for 3-D plots |
| lattice::xyplot |
| Common Bivariate Trellis Plots |
| lattice::xyplot.ts |
| Time series plotting methods |
| MASS::Aids2 |
| Australian AIDS Survival Data |
| MASS::Animals |
| Brain and Body Weights for 28 Species |
| MASS::Boston |
| Housing Values in Suburbs of Boston |
| MASS::Cars93 |
| Data from 93 Cars on Sale in the USA in 1993 |
| MASS::Cushings |
| Diagnostic Tests on Patients with Cushing's Syndrome |
| MASS::DDT |
| DDT in Kale |
| MASS::GAGurine |
| Level of GAG in Urine of Children |
| MASS::Insurance |
| Numbers of Car Insurance claims |
| MASS::Melanoma |
| Survival from Malignant Melanoma |
| MASS::Null |
| Null Spaces of Matrices |
| MASS::OME |
| Tests of Auditory Perception in Children with OME |
| MASS::Pima.tr |
| Diabetes in Pima Indian Women |
| MASS::Rabbit |
| Blood Pressure in Rabbits |
| MASS::Rubber |
| Accelerated Testing of Tyre Rubber |
| MASS::SP500 |
| Returns of the Standard and Poors 500 |
| MASS::Sitka |
| Growth Curves for Sitka Spruce Trees in 1988 |
| MASS::Sitka89 |
| Growth Curves for Sitka Spruce Trees in 1989 |
| MASS::Skye |
| AFM Compositions of Aphyric Skye Lavas |
| MASS::Traffic |
| Effect of Swedish Speed Limits on Accidents |
| MASS::UScereal |
| Nutritional and Marketing Information on US Cereals |
| MASS::UScrime |
| The Effect of Punishment Regimes on Crime Rates |
| MASS::VA |
| Veteran's Administration Lung Cancer Trial |
| MASS::abbey |
| Determinations of Nickel Content |
| MASS::accdeaths |
| Accidental Deaths in the US 1973-1978 |
| MASS::addterm |
| Try All One-Term Additions to a Model |
| MASS::anorexia |
| Anorexia Data on Weight Change |
| MASS::anova.negbin |
| Likelihood Ratio Tests for Negative Binomial GLMs |
| MASS::area |
| Adaptive Numerical Integration |
| MASS::bacteria |
| Presence of Bacteria after Drug Treatments |
| MASS::bandwidth.nrd |
| Bandwidth for density() via Normal Reference Distribution |
| MASS::bcv |
| Biased Cross-Validation for Bandwidth Selection |
| MASS::beav1 |
| Body Temperature Series of Beaver 1 |
| MASS::beav2 |
| Body Temperature Series of Beaver 2 |
| MASS::biopsy |
| Biopsy Data on Breast Cancer Patients |
| MASS::birthwt |
| Risk Factors Associated with Low Infant Birth Weight |
| MASS::boxcox |
| Box-Cox Transformations for Linear Models |
| MASS::cabbages |
| Data from a cabbage field trial |
| MASS::caith |
| Colours of Eyes and Hair of People in Caithness |
| MASS::cats |
| Anatomical Data from Domestic Cats |
| MASS::cement |
| Heat Evolved by Setting Cements |
| MASS::chem |
| Copper in Wholemeal Flour |
| MASS::con2tr |
| Convert Lists to Data Frames for use by lattice |
| MASS::confint.glm |
| Confidence Intervals for Model Parameters |
| MASS::contr.sdif |
| Successive Differences Contrast Coding |
| MASS::coop |
| Co-operative Trial in Analytical Chemistry |
| MASS::corresp |
| Simple Correspondence Analysis |
| MASS::cov.rob |
| Resistant Estimation of Multivariate Location and Scatter |
| MASS::cov.trob |
| Covariance Estimation for Multivariate t Distribution |
| MASS::cpus |
| Performance of Computer CPUs |
| MASS::crabs |
| Morphological Measurements on Leptograpsus Crabs |
| MASS::deaths |
| Monthly Deaths from Lung Diseases in the UK |
| MASS::denumerate |
| Transform an Allowable Formula for 'loglm' into one for 'terms' |
| MASS::dose.p |
| Predict Doses for Binomial Assay model |
| MASS::drivers |
| Deaths of Car Drivers in Great Britain 1969-84 |
| MASS::dropterm |
| Try All One-Term Deletions from a Model |
| MASS::eagles |
| Foraging Ecology of Bald Eagles |
| MASS::epil |
| Seizure Counts for Epileptics |
| MASS::eqscplot |
| Plots with Geometrically Equal Scales |
| MASS::farms |
| Ecological Factors in Farm Management |
| MASS::fgl |
| Measurements of Forensic Glass Fragments |
| MASS::fitdistr |
| Maximum-likelihood Fitting of Univariate Distributions |
| MASS::forbes |
| Forbes' Data on Boiling Points in the Alps |
| MASS::fractions |
| Rational Approximation |
| MASS::galaxies |
| Velocities for 82 Galaxies |
| MASS::gamma.dispersion |
| Calculate the MLE of the Gamma Dispersion Parameter in a GLM Fit |
| MASS::gamma.shape |
| Estimate the Shape Parameter of the Gamma Distribution in a GLM Fit |
| MASS::gehan |
| Remission Times of Leukaemia Patients |
| MASS::genotype |
| Rat Genotype Data |
| MASS::geyser |
| Old Faithful Geyser Data |
| MASS::gilgais |
| Line Transect of Soil in Gilgai Territory |
| MASS::ginv |
| Generalized Inverse of a Matrix |
| MASS::glm.convert |
| Change a Negative Binomial fit to a GLM fit |
| MASS::glm.nb |
| Fit a Negative Binomial Generalized Linear Model |
| MASS::glmmPQL |
| Fit Generalized Linear Mixed Models via PQL |
| MASS::hills |
| Record Times in Scottish Hill Races |
| MASS::hist.scott |
| Plot a Histogram with Automatic Bin Width Selection |
| MASS::housing |
| Frequency Table from a Copenhagen Housing Conditions Survey |
| MASS::huber |
| Huber M-estimator of Location with MAD Scale |
| MASS::hubers |
| Huber Proposal 2 Robust Estimator of Location and/or Scale |
| MASS::immer |
| Yields from a Barley Field Trial |
| MASS::isoMDS |
| Kruskal's Non-metric Multidimensional Scaling |
| MASS::kde2d |
| Two-Dimensional Kernel Density Estimation |
| MASS::lda |
| Linear Discriminant Analysis |
| MASS::ldahist |
| Histograms or Density Plots of Multiple Groups |
| MASS::leuk |
| Survival Times and White Blood Counts for Leukaemia Patients |
| MASS::lm.gls |
| Fit Linear Models by Generalized Least Squares |
| MASS::lm.ridge |
| Ridge Regression |
| MASS::loglm |
| Fit Log-Linear Models by Iterative Proportional Scaling |
| MASS::logtrans |
| Estimate log Transformation Parameter |
| MASS::lqs |
| Resistant Regression |
| MASS::mammals |
| Brain and Body Weights for 62 Species of Land Mammals |
| MASS::mca |
| Multiple Correspondence Analysis |
| MASS::mcycle |
| Data from a Simulated Motorcycle Accident |
| MASS::menarche |
| Age of Menarche in Warsaw |
| MASS::michelson |
| Michelson's Speed of Light Data |
| MASS::minn38 |
| Minnesota High School Graduates of 1938 |
| MASS::motors |
| Accelerated Life Testing of Motorettes |
| MASS::muscle |
| Effect of Calcium Chloride on Muscle Contraction in Rat Hearts |
| MASS::mvrnorm |
| Simulate from a Multivariate Normal Distribution |
| MASS::negative.binomial |
| Family function for Negative Binomial GLMs |
| MASS::newcomb |
| Newcomb's Measurements of the Passage Time of Light |
| MASS::nlschools |
| Eighth-Grade Pupils in the Netherlands |
| MASS::npk |
| Classical N, P, K Factorial Experiment |
| MASS::npr1 |
| US Naval Petroleum Reserve No. 1 data |
| MASS::oats |
| Data from an Oats Field Trial |
| MASS::painters |
| The Painter's Data of de Piles |
| MASS::pairs.lda |
| Produce Pairwise Scatterplots from an 'lda' Fit |
| MASS::parcoord |
| Parallel Coordinates Plot |
| MASS::petrol |
| N. L. Prater's Petrol Refinery Data |
| MASS::phones |
| Belgium Phone Calls 1950-1973 |
| MASS::plot.lda |
| Plot Method for Class 'lda' |
| MASS::plot.mca |
| Plot Method for Objects of Class 'mca' |
| MASS::plot.profile |
| Plotting Functions for 'profile' Objects |
| MASS::polr |
| Ordered Logistic or Probit Regression |
| MASS::predict.glmmPQL |
| Predict Method for glmmPQL Fits |
| MASS::predict.lda |
| Classify Multivariate Observations by Linear Discrimination |
| MASS::predict.lqs |
| Predict from an lqs Fit |
| MASS::predict.mca |
| Predict Method for Class 'mca' |
| MASS::predict.qda |
| Classify from Quadratic Discriminant Analysis |
| MASS::profile.glm |
| Method for Profiling glm Objects |
| MASS::qda |
| Quadratic Discriminant Analysis |
| MASS::quine |
| Absenteeism from School in Rural New South Wales |
| MASS::rational |
| Rational Approximation |
| MASS::renumerate |
| Convert a Formula Transformed by 'denumerate' |
| MASS::rlm |
| Robust Fitting of Linear Models |
| MASS::rms.curv |
| Relative Curvature Measures for Non-Linear Regression |
| MASS::rnegbin |
| Simulate Negative Binomial Variates |
| MASS::road |
| Road Accident Deaths in US States |
| MASS::rotifer |
| Numbers of Rotifers by Fluid Density |
| MASS::sammon |
| Sammon's Non-Linear Mapping |
| MASS::ships |
| Ships Damage Data |
| MASS::shoes |
| Shoe wear data of Box, Hunter and Hunter |
| MASS::shrimp |
| Percentage of Shrimp in Shrimp Cocktail |
| MASS::shuttle |
| Space Shuttle Autolander Problem |
| MASS::snails |
| Snail Mortality Data |
| MASS::stdres |
| Extract Standardized Residuals from a Linear Model |
| MASS::steam |
| The Saturated Steam Pressure Data |
| MASS::stepAIC |
| Choose a model by AIC in a Stepwise Algorithm |
| MASS::stormer |
| The Stormer Viscometer Data |
| MASS::studres |
| Extract Studentized Residuals from a Linear Model |
| MASS::summary.loglm |
| Summary Method Function for Objects of Class 'loglm' |
| MASS::summary.negbin |
| Summary Method Function for Objects of Class 'negbin' |
| MASS::summary.rlm |
| Summary Method for Robust Linear Models |
| MASS::survey |
| Student Survey Data |
| MASS::synth.tr |
| Synthetic Classification Problem |
| MASS::theta.md |
| Estimate theta of the Negative Binomial |
| MASS::topo |
| Spatial Topographic Data |
| MASS::truehist |
| Plot a Histogram |
| MASS::ucv |
| Unbiased Cross-Validation for Bandwidth Selection |
| MASS::waders |
| Counts of Waders at 15 Sites in South Africa |
| MASS::whiteside |
| House Insulation: Whiteside's Data |
| MASS::width.SJ |
| Bandwidth Selection by Pilot Estimation of Derivatives |
| MASS::write.matrix |
| Write a Matrix or Data Frame |
| MASS::wtloss |
| Weight Loss Data from an Obese Patient |
| Matrix::BunchKaufman |
| Bunch-Kaufman Decomposition Methods |
| Matrix::CAex |
| Albers' example Matrix with "Difficult" Eigen Factorization |
| Matrix::CHMfactor-class |
| CHOLMOD-based Cholesky Factorizations |
| Matrix::Cholesky-class |
| Cholesky and Bunch-Kaufman Decompositions |
| Matrix::Cholesky |
| Cholesky Decomposition of a Sparse Matrix |
| Matrix::CsparseMatrix-class |
| Class "CsparseMatrix" of Sparse Matrices in Column-compressed Form |
| Matrix::Diagonal |
| Construct a Diagonal Matrix |
| Matrix::Hilbert |
| Generate a Hilbert matrix |
| Matrix::KNex |
| Koenker-Ng Example Sparse Model Matrix and Response Vector |
| Matrix::KhatriRao |
| Khatri-Rao Matrix Product |
| Matrix::LU-class |
| LU (dense) Matrix Decompositions |
| Matrix::Matrix-class |
| Virtual Class "Matrix" Class of Matrices |
| Matrix::Matrix |
| Construct a Classed Matrix |
| Matrix::MatrixClass |
| The Matrix (Super-) Class of a Class |
| Matrix::MatrixFactorization-class |
| Class "MatrixFactorization" of Matrix Factorizations |
| Matrix::RsparseMatrix-class |
| Class "RsparseMatrix" of Sparse Matrices in Row-compressed Form |
| Matrix::Schur-class |
| Class "Schur" of Schur Matrix Factorizations |
| Matrix::Schur |
| Schur Decomposition of a Matrix |
| Matrix::SparseM-coerce-methods |
| Sparse Matrix Coercion from and to those from package 'SparseM' |
| Matrix::[<--methods |
| Methods for "[<-" - Assigning to Subsets for 'Matrix' |
| Matrix::TsparseMatrix-class |
| Class "TsparseMatrix" of Sparse Matrices in Triplet Form |
| Matrix::USCounties |
| USCounties Contiguity Matrix |
| Matrix::[-methods |
| Methods for "[": Extraction or Subsetting in Package 'Matrix' |
| Matrix::abIndex-class |
| Class "abIndex" of Abstract Index Vectors |
| Matrix::abIseq |
| Sequence Generation of "abIndex", Abstract Index Vectors |
| Matrix::all-methods |
| "Matrix" Methods for Functions all() and any() |
| Matrix::all.equal-methods |
| Matrix Package Methods for Function all.equal() |
| Matrix::atomicVector-class |
| Virtual Class "atomicVector" of Atomic Vectors |
| Matrix::band |
| Extract bands of a matrix |
| Matrix::bandSparse |
| Construct Sparse Banded Matrix from (Sup-/Super-) Diagonals |
| Matrix::bdiag |
| Construct a Block Diagonal Matrix |
| Matrix::%&% |
| Boolean Arithmetic Matrix Products: '%&%' and Methods |
| Matrix::cBind |
| 'cbind()' and 'rbind()' recursively built on cbind2/rbind2 |
| Matrix::chol |
| The Cholesky Decomposition - 'Matrix' S4 Generic and Methods |
| Matrix::chol2inv-methods |
| Inverse from Choleski or QR Decomposition - Matrix Methods |
| Matrix::colSums |
| Form Row and Column Sums and Means |
| Matrix::compMatrix-class |
| Class "compMatrix" of Composite (Factorizable) Matrices |
| Matrix::dMatrix-class |
| (Virtual) Class "dMatrix" of "double" Matrices |
| Matrix::ddenseMatrix-class |
| Virtual Class "ddenseMatrix" of Numeric Dense Matrices |
| Matrix::ddiMatrix-class |
| Class "ddiMatrix" of Diagonal Numeric Matrices |
| Matrix::denseMatrix-class |
| Virtual Class "denseMatrix" of All Dense Matrices |
| Matrix::dgCMatrix-class |
| Compressed, sparse, column-oriented numeric matrices |
| Matrix::dgRMatrix-class |
| Sparse Compressed, Row-oriented Numeric Matrices |
| Matrix::dgTMatrix-class |
| Sparse matrices in triplet form |
| Matrix::dgeMatrix-class |
| Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices |
| Matrix::diagU2N |
| Transform Triangular Matrices from Unit Triangular to General Triangular and Back |
| Matrix::diagonalMatrix-class |
| Class "diagonalMatrix" of Diagonal Matrices |
| Matrix::dmperm |
| Dulmage-Mendelsohn Permutation / Decomposition |
| Matrix::dpoMatrix-class |
| Positive Semi-definite Dense (Packed | Non-packed) Numeric Matrices |
| Matrix::drop0 |
| Drop "Explicit Zeroes" from a Sparse Matrix |
| Matrix::dsCMatrix-class |
| Numeric Symmetric Sparse (column compressed) Matrices |
| Matrix::dsRMatrix-class |
| Symmetric Sparse Compressed Row Matrices |
| Matrix::dsparseMatrix-class |
| Virtual Class "dsparseMatrix" of Numeric Sparse Matrices |
| Matrix::dspMatrix-class |
| Symmetric Dense (Packed or Unpacked) Numeric Matrices |
| Matrix::dtCMatrix-class |
| Triangular, (compressed) sparse column matrices |
| Matrix::dtRMatrix-class |
| Triangular Sparse Compressed Row Matrices |
| Matrix::dtpMatrix-class |
| Packed Triangular Dense Matrices - "dtpMatrix" |
| Matrix::dtrMatrix-class |
| Triangular, dense, numeric matrices |
| Matrix::expand |
| Expand a (Matrix) Decomposition into Factors |
| Matrix::expm |
| Matrix Exponential |
| Matrix::readHB |
| Read and write external matrix formats |
| Matrix::facmul |
| Multiplication by Decomposition Factors |
| Matrix::forceSymmetric |
| Force a Matrix to 'symmetricMatrix' Without Symmetry Checks |
| Matrix::formatSparseM |
| Formatting Sparse Numeric Matrices Utilities |
| Matrix::generalMatrix-class |
| Class "generalMatrix" of General Matrices |
| Matrix::graph2T |
| Conversions "graph" <-> (sparse) Matrix |
| Matrix::image-methods |
| Methods for image() in Package 'Matrix' |
| Matrix::indMatrix-class |
| Index Matrices |
| Matrix::index-class |
| Virtual Class "index" - Simple Class for Matrix Indices |
| Matrix::invPerm |
| Inverse Permutation Vector |
| Matrix::is.na-methods |
| is.na(), is.finite() Methods for 'Matrix' Objects |
| Matrix::is.null.DN |
| Are the Dimnames 'dn' NULL-like ? |
| Matrix::isSymmetric-methods |
| Methods for Function 'isSymmetric' in Package 'Matrix' |
| Matrix::isTriangular |
| Test whether a Matrix is Triangular or Diagonal |
| Matrix::kronecker-methods |
| Methods for Function 'kronecker()' in Package 'Matrix' |
| Matrix::ldenseMatrix-class |
| Virtual Class "ldenseMatrix" of Dense Logical Matrices |
| Matrix::ldiMatrix-class |
| Class "ldiMatrix" of Diagonal Logical Matrices |
| Matrix::lgeMatrix-class |
| Class "lgeMatrix" of General Dense Logical Matrices |
| Matrix::lsparseMatrix-class |
| Sparse logical matrices |
| Matrix::lspMatrix-class |
| Symmetric Dense Logical Matrices |
| Matrix::ltpMatrix-class |
| Triangular Dense Logical Matrices |
| Matrix::lu |
| (Generalized) Triangular Decomposition of a Matrix |
| Matrix::mat2triplet |
| Map Matrix to its Triplet Representation |
| Matrix::%*%-methods |
| Matrix (Cross) Products (of Transpose) |
| Matrix::nMatrix-class |
| Class "nMatrix" of Non-zero Pattern Matrices |
| Matrix::ndenseMatrix-class |
| Virtual Class "ndenseMatrix" of Dense Logical Matrices |
| Matrix::nearPD |
| Nearest Positive Definite Matrix |
| Matrix::ngeMatrix-class |
| Class "ngeMatrix" of General Dense Nonzero-pattern Matrices |
| Matrix::nnzero |
| The Number of Non-Zero Values of a Matrix |
| Matrix::norm |
| Matrix Norms |
| Matrix::nsparseMatrix-class |
| Sparse "pattern" Matrices |
| Matrix::nspMatrix-class |
| Symmetric Dense Nonzero-Pattern Matrices |
| Matrix::ntpMatrix-class |
| Triangular Dense Logical Matrices |
| Matrix::number-class |
| Class "number" of Possibly Complex Numbers |
| Matrix::pMatrix-class |
| Permutation matrices |
| Matrix::packedMatrix-class |
| Virtual Class '"packedMatrix"' of Packed Dense Matrices |
| Matrix::formatSpMatrix |
| Format and Print Sparse Matrices Flexibly |
| Matrix::qr |
| QR Decomposition - S4 Methods and Generic |
| Matrix::rankMatrix |
| Rank of a Matrix |
| Matrix::rcond |
| Estimate the Reciprocal Condition Number |
| Matrix::rep2abI |
| Replicate Vectors into 'abIndex' Result |
| Matrix::replValue-class |
| Virtual Class "replValue" - Simple Class for Subassignment Values |
| Matrix::rleDiff-class |
| Class "rleDiff" of rle(diff(.)) Stored Vectors |
| Matrix::rsparsematrix |
| Random Sparse Matrix |
| Matrix::solve |
| Methods in Package Matrix for Function 'solve()' |
| Matrix::spMatrix |
| Sparse Matrix Constructor From Triplet |
| Matrix::sparse.model.matrix |
| Construct Sparse Design / Model Matrices |
| Matrix::sparseLU-class |
| Sparse LU decomposition of a square sparse matrix |
| Matrix::sparseMatrix-class |
| Virtual Class "sparseMatrix" - Mother of Sparse Matrices |
| Matrix::sparseMatrix |
| General Sparse Matrix Construction from Nonzero Entries |
| Matrix::sparseQR-class |
| Sparse QR decomposition of a sparse matrix |
| Matrix::sparseVector-class |
| Sparse Vector Classes |
| Matrix::sparseVector |
| Sparse Vector Construction from Nonzero Entries |
| Matrix::symmetricMatrix-class |
| Virtual Class of Symmetric Matrices in Package Matrix |
| Matrix::symmpart |
| Symmetric Part and Skew(symmetric) Part of a Matrix |
| Matrix::triangularMatrix-class |
| Virtual Class of Triangular Matrices in Package Matrix |
| Matrix::uniqTsparse |
| Unique (Sorted) TsparseMatrix Representations |
| Matrix::pack |
| Representation of Packed and Unpacked Dense Matrices |
| Matrix::unpackedMatrix-class |
| Virtual Class '"unpackedMatrix"' of Unpacked Dense Matrices |
| Matrix::iMatrix-class |
| Virtual Classes Not Yet Really Implemented and Used |
| Matrix::updown |
| Up- and Down-Dating a Cholesky Decomposition |
| Matrix::wrld_1deg |
| World 1-degree grid contiguity matrix |
| methods::as |
| Force an Object to Belong to a Class |
| methods::character-class |
| Classes Corresponding to Basic Data Types |
| methods::callGeneric |
| Call the Current Generic Function from a Method |
| methods::canCoerce |
| Can an Object be Coerced to a Certain S4 Class? |
| methods::cbind2 |
| Combine two Objects by Columns or Rows |
| methods::Classes_Details |
| Class Definitions |
| methods::Classes |
| S4 Class Documentation |
| methods::classesToAM |
| Compute an Adjacency Matrix for Superclasses of Class Definitions |
| methods::className |
| Class names including the corresponding package |
| methods::classRepresentation-class |
| Class Objects |
| methods::Documentation |
| Using and Creating On-line Documentation for Classes and Methods |
| methods::dotsMethods |
| The Use of '...' in Method Signatures |
| methods::EmptyMethodsList-class |
| Internal Class representing Empty Methods List |
| methods::environment-class |
| Class '"environment"' |
| methods::evalSource |
| Use Function Definitions from a Source File without Reinstalling a Package |
| methods::removeClass |
| Find Class Definitions |
| methods::findMethods |
| Description of the Methods Defined for a Generic Function |
| methods::fixPre1.8 |
| Fix Objects Saved from R Versions Previous to 1.8 |
| methods::genericFunction-class |
| Generic Function Objects |
| methods::GenericFunctions |
| Tools for Managing Generic Functions |
| methods::getClass |
| Get Class Definition |
| methods::getMethod |
| Get or Test for the Definition of a Method |
| methods::getPackageName |
| The Name associated with a Given Package |
| methods::hasArg |
| Look for an Argument in the Call |
| methods::implicitGeneric |
| Manage Implicit Versions of Generic Functions |
| methods::inheritedSlotNames |
| Names of Slots Inherited From a Super Class |
| methods::initialize-methods |
| Methods to Initialize New Objects from a Class |
| methods::is |
| Is an Object from a Class? |
| methods::isSealedMethod |
| Check for a Sealed Method or Class |
| methods::language-class |
| Classes to Represent Unevaluated Language Objects |
| methods::LinearMethodsList-class |
| Class "LinearMethodsList" |
| methods::LocalReferenceClasses |
| Localized Objects based on Reference Classes |
| methods::method.skeleton |
| Create a Skeleton File for a New Method |
| methods::MethodDefinition-class |
| Classes to Represent Method Definitions |
| methods::Methods_Details |
| General Information on Methods |
| methods::methods-deprecated |
| Deprecated Functions in Package 'methods' |
| methods::methods-package |
| Formal Methods and Classes |
| methods::Methods |
| S4 Class Documentation |
| methods::MethodsList-class |
| Class MethodsList, Defunct Representation of Methods |
| methods::MethodWithNext-class |
| Class MethodWithNext |
| methods::new |
| Generate an Object from a Class |
| methods::callNextMethod |
| Call an Inherited Method |
| methods::nonStructure-class |
| A non-structure S4 Class for basic types |
| methods::ObjectsWithPackage-class |
| A Vector of Object Names, with associated Package Names |
| methods::promptClass |
| Generate a Shell for Documentation of a Formal Class |
| methods::promptMethods |
| Generate a Shell for Documentation of Formal Methods |
| methods::ReferenceClasses |
| Objects With Fields Treated by Reference (OOP-style) |
| methods::removeMethod |
| Remove a Method |
| methods::representation |
| Construct a Representation or a Prototype for a Class Definition |
| methods::S3Part |
| S4 Classes that Contain S3 Classes |
| methods::S4groupGeneric |
| S4 Group Generic Functions |
| methods::SClassExtension-class |
| Class to Represent Inheritance (Extension) Relations |
| methods::selectSuperClasses |
| Super Classes (of Specific Kinds) of a Class |
| methods::coerce |
| Methods for Coercing an Object to a Class |
| methods::setClass |
| Create a Class Definition |
| methods::setClassUnion |
| Classes Defined as the Union of Other Classes |
| methods::setGeneric |
| Create a Generic Version of a Function |
| methods::setGroupGeneric |
| Create a Group Generic Version of a Function |
| methods::setIs |
| Specify a Superclass Explicitly |
| methods::setLoadAction |
| Set Actions For Package Loading |
| methods::setMethod |
| Create and Save a Method |
| methods::setOldClass |
| Register Old-Style (S3) Classes and Inheritance |
| methods::makeClassRepresentation |
| Create a Class Definition |
| methods::show |
| Show an Object |
| methods::showMethods |
| Show all the methods for the specified function(s) or class |
| methods::signature-class |
| Class '"signature"' For Method Definitions |
| methods::slot |
| The Slots in an Object from a Formal Class |
| methods::envRefClass-class |
| Class '"envRefClass"' |
| methods::structure-class |
| Classes Corresponding to Basic Structures |
| methods::testInheritedMethods |
| Test for and Report about Selection of Inherited Methods |
| methods::traceable-class |
| Classes Used Internally to Control Tracing |
| methods::validObject |
| Test the Validity of an Object |
| methods::.BasicFunsList |
| List of Builtin and Special Functions |
| mgcv::betar |
| GAM beta regression family |
| mgcv::FFdes |
| Level 5 fractional factorial designs |
| mgcv::Predict.matrix |
| Prediction methods for smooth terms in a GAM |
| mgcv::Predict.matrix.cr.smooth |
| Predict matrix method functions |
| mgcv::Predict.matrix.soap.film |
| Prediction matrix for soap film smooth |
| mgcv::Rrank |
| Find rank of upper triangular matrix |
| mgcv::Tweedie |
| GAM Tweedie families |
| mgcv::XWXd |
| Internal functions for discretized model matrix handling |
| mgcv::anova.gam |
| Approximate hypothesis tests related to GAM fits |
| mgcv::bam |
| Generalized additive models for very large datasets |
| mgcv::bam.update |
| Update a strictly additive bam model for new data. |
| mgcv::bandchol |
| Choleski decomposition of a band diagonal matrix |
| mgcv::blas.thread.test |
| BLAS thread safety |
| mgcv::cSplineDes |
| Evaluate cyclic B spline basis |
| mgcv::choldrop |
| Deletion and rank one Cholesky factor update |
| mgcv::choose.k |
| Basis dimension choice for smooths |
| mgcv::cnorm |
| GAM censored normal family for log-normal AFT and Tobit models |
| mgcv::cox.ph |
| Additive Cox Proportional Hazard Model |
| mgcv::cox.pht |
| Additive Cox proportional hazard models with time varying covariates |
| mgcv::dpnorm |
| Stable evaluation of difference between normal c.d.f.s |
| mgcv::exclude.too.far |
| Exclude prediction grid points too far from data |
| mgcv::extract.lme.cov |
| Extract the data covariance matrix from an lme object |
| mgcv::factor.smooth.interaction |
| Factor smooth interactions in GAMs |
| mgcv::family.mgcv |
| Distribution families in mgcv |
| mgcv::fix.family.link |
| Modify families for use in GAM fitting and checking |
| mgcv::fixDependence |
| Detect linear dependencies of one matrix on another |
| mgcv::formXtViX |
| Form component of GAMM covariance matrix |
| mgcv::formula.gam |
| GAM formula |
| mgcv::fs.test |
| FELSPLINE test function |
| mgcv::full.score |
| GCV/UBRE score for use within nlm |
| mgcv::gam |
| Generalized additive models with integrated smoothness estimation |
| mgcv::gam.check |
| Some diagnostics for a fitted gam model |
| mgcv::gam.control |
| Setting GAM fitting defaults |
| mgcv::gam.convergence |
| GAM convergence and performance issues |
| mgcv::gam.fit |
| GAM P-IRLS estimation with GCV/UBRE smoothness estimation |
| mgcv::gam.fit3 |
| P-IRLS GAM estimation with GCV, UBRE/AIC or RE/ML derivative calculation |
| mgcv::gam.mh |
| Simple posterior simulation with gam fits |
| mgcv::gam.models |
| Specifying generalized additive models |
| mgcv::gam.outer |
| Minimize GCV or UBRE score of a GAM using 'outer' iteration |
| mgcv::gam.scale |
| Scale parameter estimation in GAMs |
| mgcv::gam.selection |
| Generalized Additive Model Selection |
| mgcv::gam.side |
| Identifiability side conditions for a GAM |
| mgcv::gam.vcomp |
| Report gam smoothness estimates as variance components |
| mgcv::gam2objective |
| Objective functions for GAM smoothing parameter estimation |
| mgcv::gamObject |
| Fitted gam object |
| mgcv::gamSim |
| Simulate example data for GAMs |
| mgcv::gamm |
| Generalized Additive Mixed Models |
| mgcv::gammals |
| Gamma location-scale model family |
| mgcv::gaulss |
| Gaussian location-scale model family |
| mgcv::get.var |
| Get named variable or evaluate expression from list or data.frame |
| mgcv::gevlss |
| Generalized Extreme Value location-scale model family |
| mgcv::ginla |
| GAM Integrated Nested Laplace Approximation Newton Enhanced |
| mgcv::gumbls |
| Gumbel location-scale model family |
| mgcv::identifiability |
| Identifiability constraints |
| mgcv::inSide |
| Are points inside boundary? |
| mgcv::influence.gam |
| Extract the diagonal of the influence/hat matrix for a GAM |
| mgcv::initial.sp |
| Starting values for multiple smoothing parameter estimation |
| mgcv::interpret.gam |
| Interpret a GAM formula |
| mgcv::jagam |
| Just Another Gibbs Additive Modeller: JAGS support for mgcv. |
| mgcv::k.check |
| Checking smooth basis dimension |
| mgcv::ldTweedie |
| Log Tweedie density evaluation |
| mgcv::linear.functional.terms |
| Linear functionals of a smooth in GAMs |
| mgcv::logLik.gam |
| AIC and Log likelihood for a fitted GAM |
| mgcv::magic |
| Stable Multiple Smoothing Parameter Estimation by GCV or UBRE |
| mgcv::magic.post.proc |
| Auxilliary information from magic fit |
| mgcv::mgcv.FAQ |
| Frequently Asked Questions for package mgcv |
| mgcv::mgcv.package |
| Mixed GAM Computation Vehicle with GCV/AIC/REML smoothness estimation and GAMMs by REML/PQL |
| mgcv::mgcv.parallel |
| Parallel computation in mgcv. |
| mgcv::missing.data |
| Missing data in GAMs |
| mgcv::model.matrix.gam |
| Extract model matrix from GAM fit |
| mgcv::mono.con |
| Monotonicity constraints for a cubic regression spline |
| mgcv::mroot |
| Smallest square root of matrix |
| mgcv::multinom |
| GAM multinomial logistic regression |
| mgcv::mvn |
| Multivariate normal additive models |
| mgcv::negbin |
| GAM negative binomial families |
| mgcv::new.name |
| Obtain a name for a new variable that is not already in use |
| mgcv::notExp |
| Functions for better-than-log positive parameterization |
| mgcv::notExp2 |
| Alternative to log parameterization for variance components |
| mgcv::null.space.dimension |
| The basis of the space of un-penalized functions for a TPRS |
| mgcv::ocat |
| GAM ordered categorical family |
| mgcv::one.se.rule |
| The one standard error rule for smoother models |
| mgcv::pcls |
| Penalized Constrained Least Squares Fitting |
| mgcv::pdIdnot |
| Overflow proof pdMat class for multiples of the identity matrix |
| mgcv::pdTens |
| Functions implementing a pdMat class for tensor product smooths |
| mgcv::pen.edf |
| Extract the effective degrees of freedom associated with each penalty in a gam fit |
| mgcv::place.knots |
| Automatically place a set of knots evenly through covariate values |
| mgcv::plot.gam |
| Default GAM plotting |
| mgcv::polys.plot |
| Plot geographic regions defined as polygons |
| mgcv::predict.bam |
| Prediction from fitted Big Additive Model model |
| mgcv::predict.gam |
| Prediction from fitted GAM model |
| mgcv::print.gam |
| Print a Generalized Additive Model object. |
| mgcv::psum.chisq |
| Evaluate the c.d.f. of a weighted sum of chi-squared deviates |
| mgcv::qq.gam |
| QQ plots for gam model residuals |
| mgcv::rTweedie |
| Generate Tweedie random deviates |
| mgcv::random.effects |
| Random effects in GAMs |
| mgcv::residuals.gam |
| Generalized Additive Model residuals |
| mgcv::rmvn |
| Generate from or evaluate multivariate normal or t densities. |
| mgcv::s |
| Defining smooths in GAM formulae |
| mgcv::scat |
| GAM scaled t family for heavy tailed data |
| mgcv::sdiag |
| Extract or modify diagonals of a matrix |
| mgcv::single.index |
| Single index models with mgcv |
| mgcv::slanczos |
| Compute truncated eigen decomposition of a symmetric matrix |
| mgcv::smooth.construct |
| Constructor functions for smooth terms in a GAM |
| mgcv::smooth.construct.ad.smooth.spec |
| Adaptive smooths in GAMs |
| mgcv::smooth.construct.bs.smooth.spec |
| Penalized B-splines in GAMs |
| mgcv::smooth.construct.cr.smooth.spec |
| Penalized Cubic regression splines in GAMs |
| mgcv::smooth.construct.ds.smooth.spec |
| Low rank Duchon 1977 splines |
| mgcv::smooth.construct.fs.smooth.spec |
| Factor smooth interactions in GAMs |
| mgcv::smooth.construct.gp.smooth.spec |
| Low rank Gaussian process smooths |
| mgcv::smooth.construct.mrf.smooth.spec |
| Markov Random Field Smooths |
| mgcv::smooth.construct.ps.smooth.spec |
| P-splines in GAMs |
| mgcv::smooth.construct.re.smooth.spec |
| Simple random effects in GAMs |
| mgcv::smooth.construct.so.smooth.spec |
| Soap film smoother constructer |
| mgcv::smooth.construct.sos.smooth.spec |
| Splines on the sphere |
| mgcv::smooth.construct.sz.smooth.spec |
| Constrained factor smooth interactions in GAMs |
| mgcv::smooth.construct.t2.smooth.spec |
| Tensor product smoothing constructor |
| mgcv::smooth.construct.tensor.smooth.spec |
| Tensor product smoothing constructor |
| mgcv::smooth.construct.tp.smooth.spec |
| Penalized thin plate regression splines in GAMs |
| mgcv::smooth.info |
| Generic function to provide extra information about smooth specification |
| mgcv::smooth.terms |
| Smooth terms in GAM |
| mgcv::smooth2random |
| Convert a smooth to a form suitable for estimating as random effect |
| mgcv::smoothCon |
| Prediction/Construction wrapper functions for GAM smooth terms |
| mgcv::sp.vcov |
| Extract smoothing parameter estimator covariance matrix from (RE)ML GAM fit |
| mgcv::spasm.construct |
| Experimental sparse smoothers |
| mgcv::step.gam |
| Alternatives to step.gam |
| mgcv::summary.gam |
| Summary for a GAM fit |
| mgcv::t2 |
| Define alternative tensor product smooths in GAM formulae |
| mgcv::te |
| Define tensor product smooths or tensor product interactions in GAM formulae |
| mgcv::tensor.prod.model.matrix |
| Row Kronecker product/ tensor product smooth construction |
| mgcv::trichol |
| Choleski decomposition of a tri-diagonal matrix |
| mgcv::twlss |
| Tweedie location scale family |
| mgcv::uniquecombs |
| find the unique rows in a matrix |
| mgcv::vcov.gam |
| Extract parameter (estimator) covariance matrix from GAM fit |
| mgcv::vis.gam |
| Visualization of GAM objects |
| mgcv::ziP |
| GAM zero-inflated (hurdle) Poisson regression family |
| mgcv::ziplss |
| Zero inflated (hurdle) Poisson location-scale model family |
| nlme::ACF |
| Autocorrelation Function |
| nlme::ACF.gls |
| Autocorrelation Function for gls Residuals |
| nlme::ACF.lme |
| Autocorrelation Function for lme Residuals |
| nlme::Alfalfa |
| Split-Plot Experiment on Varieties of Alfalfa |
| nlme::Assay |
| Bioassay on Cell Culture Plate |
| nlme::BodyWeight |
| Rat weight over time for different diets |
| nlme::Cefamandole |
| Pharmacokinetics of Cefamandole |
| nlme::coef<- |
| Assign Values to Coefficients |
| nlme::covariate<- |
| Assign Covariate Values |
| nlme::covariate<-.varFunc |
| Assign varFunc Covariate |
| nlme::Dialyzer |
| High-Flux Hemodialyzer |
| nlme::Dim |
| Extract Dimensions from an Object |
| nlme::Dim.corSpatial |
| Dimensions of a corSpatial Object |
| nlme::Dim.corStruct |
| Dimensions of a corStruct Object |
| nlme::Dim.pdMat |
| Dimensions of a pdMat Object |
| nlme::Earthquake |
| Earthquake Intensity |
| nlme::[.pdMat |
| Subscript a pdMat Object |
| nlme::Fatigue |
| Cracks caused by metal fatigue |
| nlme::Gasoline |
| Refinery yield of gasoline |
| nlme::Glucose |
| Glucose levels over time |
| nlme::Glucose2 |
| Glucose Levels Following Alcohol Ingestion |
| nlme::Gun |
| Methods for firing naval guns |
| nlme::IGF |
| Radioimmunoassay of IGF-I Protein |
| nlme::Initialize |
| Initialize Object |
| nlme::Initialize.corStruct |
| Initialize corStruct Object |
| nlme::Initialize.glsStruct |
| Initialize a glsStruct Object |
| nlme::Initialize.lmeStruct |
| Initialize an lmeStruct Object |
| nlme::Initialize.reStruct |
| Initialize reStruct Object |
| nlme::Initialize.varFunc |
| Initialize varFunc Object |
| nlme::LDEsysMat |
| Generate system matrix for LDEs |
| nlme::Machines |
| Productivity Scores for Machines and Workers |
| nlme::MathAchSchool |
| School demographic data for MathAchieve |
| nlme::MathAchieve |
| Mathematics achievement scores |
| nlme::matrix<- |
| Assign Matrix Values |
| nlme::matrix<-.pdMat |
| Assign Matrix to a pdMat or pdBlocked Object |
| nlme::matrix<-.reStruct |
| Assign reStruct Matrices |
| nlme::Meat |
| Tenderness of meat |
| nlme::Milk |
| Protein content of cows' milk |
| nlme::Muscle |
| Contraction of heart muscle sections |
| nlme::Names |
| Names Associated with an Object |
| nlme::Names.formula |
| Extract Names from a formula |
| nlme::Names.pdBlocked |
| Names of a pdBlocked Object |
| nlme::Names.pdMat |
| Names of a pdMat Object |
| nlme::Names.reStruct |
| Names of an reStruct Object |
| nlme::Nitrendipene |
| Assay of nitrendipene |
| nlme::Oats |
| Split-plot Experiment on Varieties of Oats |
| nlme::Orthodont |
| Growth curve data on an orthdontic measurement |
| nlme::Ovary |
| Counts of Ovarian Follicles |
| nlme::Oxboys |
| Heights of Boys in Oxford |
| nlme::Oxide |
| Variability in Semiconductor Manufacturing |
| nlme::PBG |
| Effect of Phenylbiguanide on Blood Pressure |
| nlme::Phenobarb |
| Phenobarbitol Kinetics |
| nlme::Pixel |
| X-ray pixel intensities over time |
| nlme::Quinidine |
| Quinidine Kinetics |
| nlme::Rail |
| Evaluation of Stress in Railway Rails |
| nlme::RatPupWeight |
| The weight of rat pups |
| nlme::Relaxin |
| Assay for Relaxin |
| nlme::Remifentanil |
| Pharmacokinetics of Remifentanil |
| nlme::Soybean |
| Growth of soybean plants |
| nlme::Spruce |
| Growth of Spruce Trees |
| nlme::Tetracycline1 |
| Pharmacokinetics of tetracycline |
| nlme::Tetracycline2 |
| Pharmacokinetics of tetracycline |
| nlme::VarCorr |
| Extract variance and correlation components |
| nlme::Variogram |
| Calculate Semi-variogram |
| nlme::Variogram.corExp |
| Calculate Semi-variogram for a corExp Object |
| nlme::Variogram.corGaus |
| Calculate Semi-variogram for a corGaus Object |
| nlme::Variogram.corLin |
| Calculate Semi-variogram for a corLin Object |
| nlme::Variogram.corRatio |
| Calculate Semi-variogram for a corRatio Object |
| nlme::Variogram.corSpatial |
| Calculate Semi-variogram for a corSpatial Object |
| nlme::Variogram.corSpher |
| Calculate Semi-variogram for a corSpher Object |
| nlme::Variogram.default |
| Calculate Semi-variogram |
| nlme::Variogram.gls |
| Calculate Semi-variogram for Residuals from a gls Object |
| nlme::Variogram.lme |
| Calculate Semi-variogram for Residuals from an lme Object |
| nlme::Wafer |
| Modeling of Analog MOS Circuits |
| nlme::Wheat |
| Yields by growing conditions |
| nlme::Wheat2 |
| Wheat Yield Trials |
| nlme::allCoef |
| Extract Coefficients from a Set of Objects |
| nlme::anova.gls |
| Compare Likelihoods of Fitted Objects |
| nlme::anova.lme |
| Compare Likelihoods of Fitted Objects |
| nlme::as.matrix.corStruct |
| Matrix of a corStruct Object |
| nlme::as.matrix.pdMat |
| Matrix of a pdMat Object |
| nlme::as.matrix.reStruct |
| Matrices of an reStruct Object |
| nlme::asOneFormula |
| Combine Formulas of a Set of Objects |
| nlme::asTable |
| Convert groupedData to a matrix |
| nlme::augPred |
| Augmented Predictions |
| nlme::balancedGrouped |
| Create a groupedData object from a matrix |
| nlme::bdf |
| Language scores |
| nlme::coef.corStruct |
| Coefficients of a corStruct Object |
| nlme::coef.gnls |
| Extract gnls Coefficients |
| nlme::coef.lmList |
| Extract lmList Coefficients |
| nlme::coef.lme |
| Extract lme Coefficients |
| nlme::coef.modelStruct |
| Extract modelStruct Object Coefficients |
| nlme::coef.pdMat |
| pdMat Object Coefficients |
| nlme::coef.reStruct |
| reStruct Object Coefficients |
| nlme::coef.varFunc |
| varFunc Object Coefficients |
| nlme::collapse |
| Collapse According to Groups |
| nlme::collapse.groupedData |
| Collapse a groupedData Object |
| nlme::compareFits |
| Compare Fitted Objects |
| nlme::comparePred |
| Compare Predictions |
| nlme::corAR1 |
| AR(1) Correlation Structure |
| nlme::corARMA |
| ARMA(p,q) Correlation Structure |
| nlme::corCAR1 |
| Continuous AR(1) Correlation Structure |
| nlme::corClasses |
| Correlation Structure Classes |
| nlme::corCompSymm |
| Compound Symmetry Correlation Structure |
| nlme::corExp |
| Exponential Correlation Structure |
| nlme::corFactor |
| Factor of a Correlation Matrix |
| nlme::corFactor.corCompSymm |
| Factor of a corStruct Object Matrix |
| nlme::corGaus |
| Gaussian Correlation Structure |
| nlme::corLin |
| Linear Correlation Structure |
| nlme::corMatrix |
| Extract Correlation Matrix |
| nlme::corMatrix.corStruct |
| Matrix of a corStruct Object |
| nlme::corMatrix.pdBlocked |
| Extract Correlation Matrix from a pdMat Object |
| nlme::corMatrix.reStruct |
| Extract Correlation Matrix from Components of an reStruct Object |
| nlme::corNatural |
| General correlation in natural parameterization |
| nlme::corRatio |
| Rational Quadratic Correlation Structure |
| nlme::corSpatial |
| Spatial Correlation Structure |
| nlme::corSpher |
| Spherical Correlation Structure |
| nlme::corSymm |
| General Correlation Structure |
| nlme::ergoStool |
| Ergometrics experiment with stool types |
| nlme::fdHess |
| Finite difference Hessian |
| nlme::fitted.glsStruct |
| Calculate glsStruct Fitted Values |
| nlme::fitted.gnlsStruct |
| Calculate gnlsStruct Fitted Values |
| nlme::fitted.lmList |
| Extract lmList Fitted Values |
| nlme::fitted.lme |
| Extract lme Fitted Values |
| nlme::fitted.lmeStruct |
| Calculate lmeStruct Fitted Values |
| nlme::fitted.nlmeStruct |
| Calculate nlmeStruct Fitted Values |
| nlme::fixed.effects |
| Extract Fixed Effects |
| nlme::fixed.effects.lmList |
| Extract lmList Fixed Effects |
| nlme::formula.pdBlocked |
| Extract pdBlocked Formula |
| nlme::formula.pdMat |
| Extract pdMat Formula |
| nlme::formula.reStruct |
| Extract reStruct Object Formula |
| nlme::gapply |
| Apply a Function by Groups |
| nlme::getCovariate |
| Extract Covariate from an Object |
| nlme::getCovariate.corStruct |
| Extract corStruct Object Covariate |
| nlme::getCovariate.data.frame |
| Extract Data Frame Covariate |
| nlme::getCovariate.varFunc |
| Extract varFunc Covariate |
| nlme::getCovariateFormula |
| Extract Covariates Formula |
| nlme::getData |
| Extract Data from an Object |
| nlme::getData.gls |
| Extract gls Object Data |
| nlme::getData.lmList |
| Extract lmList Object Data |
| nlme::getData.lme |
| Extract lme Object Data |
| nlme::getGroups |
| Extract Grouping Factors from an Object |
| nlme::getGroups.corStruct |
| Extract corStruct Groups |
| nlme::getGroups.data.frame |
| Extract Groups from a Data Frame |
| nlme::getGroups.gls |
| Extract gls Object Groups |
| nlme::getGroups.lmList |
| Extract lmList Object Groups |
| nlme::getGroups.lme |
| Extract lme Object Groups |
| nlme::getGroups.varFunc |
| Extract varFunc Groups |
| nlme::getGroupsFormula |
| Extract Grouping Formula |
| nlme::getResponse |
| Extract Response Variable from an Object |
| nlme::getResponseFormula |
| Extract Formula Specifying Response Variable |
| nlme::getVarCov |
| Extract variance-covariance matrix |
| nlme::gls |
| Fit Linear Model Using Generalized Least Squares |
| nlme::glsControl |
| Control Values for gls Fit |
| nlme::glsObject |
| Fitted gls Object |
| nlme::glsStruct |
| Generalized Least Squares Structure |
| nlme::gnls |
| Fit Nonlinear Model Using Generalized Least Squares |
| nlme::gnlsControl |
| Control Values for gnls Fit |
| nlme::gnlsObject |
| Fitted gnls Object |
| nlme::gnlsStruct |
| Generalized Nonlinear Least Squares Structure |
| nlme::groupedData |
| Construct a groupedData Object |
| nlme::gsummary |
| Summarize by Groups |
| nlme::intervals |
| Confidence Intervals on Coefficients |
| nlme::intervals.gls |
| Confidence Intervals on gls Parameters |
| nlme::intervals.lmList |
| Confidence Intervals on lmList Coefficients |
| nlme::intervals.lme |
| Confidence Intervals on lme Parameters |
| nlme::isBalanced |
| Check a Design for Balance |
| nlme::isInitialized |
| Check if Object is Initialized |
| nlme::lmList |
| List of lm Objects with a Common Model |
| nlme::lmList.groupedData |
| lmList Fit from a groupedData Object |
| nlme::lme |
| Linear Mixed-Effects Models |
| nlme::lme.groupedData |
| LME fit from groupedData Object |
| nlme::lme.lmList |
| LME fit from lmList Object |
| nlme::lmeControl |
| Specifying Control Values for lme Fit |
| nlme::lmeObject |
| Fitted lme Object |
| nlme::lmeStruct |
| Linear Mixed-Effects Structure |
| nlme::logDet |
| Extract the Logarithm of the Determinant |
| nlme::logDet.corStruct |
| Extract corStruct Log-Determinant |
| nlme::logDet.pdMat |
| Extract Log-Determinant from a pdMat Object |
| nlme::logDet.reStruct |
| Extract reStruct Log-Determinants |
| nlme::logLik.corStruct |
| Extract corStruct Log-Likelihood |
| nlme::logLik.glsStruct |
| Log-Likelihood of a glsStruct Object |
| nlme::logLik.gnls |
| Log-Likelihood of a gnls Object |
| nlme::logLik.gnlsStruct |
| Log-Likelihood of a gnlsStruct Object |
| nlme::logLik.lmList |
| Log-Likelihood of an lmList Object |
| nlme::logLik.lme |
| Log-Likelihood of an lme Object |
| nlme::logLik.lmeStruct |
| Log-Likelihood of an lmeStruct Object |
| nlme::logLik.reStruct |
| Calculate reStruct Log-Likelihood |
| nlme::logLik.varFunc |
| Extract varFunc logLik |
| nlme::model.matrix.reStruct |
| reStruct Model Matrix |
| nlme::needUpdate |
| Check if Update is Needed |
| nlme::needUpdate.modelStruct |
| Check if a modelStruct Object Needs Updating |
| nlme::nlme |
| Nonlinear Mixed-Effects Models |
| nlme::nlme.nlsList |
| NLME fit from nlsList Object |
| nlme::nlmeControl |
| Control Values for nlme Fit |
| nlme::nlmeObject |
| Fitted nlme Object |
| nlme::nlmeStruct |
| Nonlinear Mixed-Effects Structure |
| nlme::nlsList |
| List of nls Objects with a Common Model |
| nlme::nlsList.selfStart |
| nlsList Fit from a selfStart Function |
| nlme::pairs.compareFits |
| Pairs Plot of compareFits Object |
| nlme::pairs.lmList |
| Pairs Plot of an lmList Object |
| nlme::pairs.lme |
| Pairs Plot of an lme Object |
| nlme::pdBlocked |
| Positive-Definite Block Diagonal Matrix |
| nlme::pdClasses |
| Positive-Definite Matrix Classes |
| nlme::pdCompSymm |
| Positive-Definite Matrix with Compound Symmetry Structure |
| nlme::pdConstruct |
| Construct pdMat Objects |
| nlme::pdConstruct.pdBlocked |
| Construct pdBlocked Objects |
| nlme::pdDiag |
| Diagonal Positive-Definite Matrix |
| nlme::pdFactor |
| Square-Root Factor of a Positive-Definite Matrix |
| nlme::pdFactor.reStruct |
| Extract Square-Root Factor from Components of an reStruct Object |
| nlme::pdIdent |
| Multiple of the Identity Positive-Definite Matrix |
| nlme::pdLogChol |
| General Positive-Definite Matrix |
| nlme::pdMat |
| Positive-Definite Matrix |
| nlme::pdMatrix |
| Extract Matrix or Square-Root Factor from a pdMat Object |
| nlme::pdMatrix.reStruct |
| Extract Matrix or Square-Root Factor from Components of an reStruct Object |
| nlme::pdNatural |
| General Positive-Definite Matrix in Natural Parametrization |
| nlme::pdSymm |
| General Positive-Definite Matrix |
| nlme::phenoModel |
| Model function for the Phenobarb data |
| nlme::plot.ACF |
| Plot an ACF Object |
| nlme::plot.Variogram |
| Plot a Variogram Object |
| nlme::plot.augPred |
| Plot an augPred Object |
| nlme::plot.compareFits |
| Plot a compareFits Object |
| nlme::plot.gls |
| Plot a gls Object |
| nlme::plot.intervals.lmList |
| Plot lmList Confidence Intervals |
| nlme::plot.lmList |
| Plot an lmList Object |
| nlme::plot.lme |
| Plot an lme or nls object |
| nlme::plot.nffGroupedData |
| Plot an nffGroupedData Object |
| nlme::plot.nfnGroupedData |
| Plot an nfnGroupedData Object |
| nlme::plot.nmGroupedData |
| Plot an nmGroupedData Object |
| nlme::plot.ranef.lmList |
| Plot a ranef.lmList Object |
| nlme::plot.ranef.lme |
| Plot a ranef.lme Object |
| nlme::pooledSD |
| Extract Pooled Standard Deviation |
| nlme::predict.gls |
| Predictions from a gls Object |
| nlme::predict.gnls |
| Predictions from a gnls Object |
| nlme::predict.lmList |
| Predictions from an lmList Object |
| nlme::predict.lme |
| Predictions from an lme Object |
| nlme::predict.nlme |
| Predictions from an nlme Object |
| nlme::print.summary.pdMat |
| Print a summary.pdMat Object |
| nlme::print.varFunc |
| Print a varFunc Object |
| nlme::qqnorm.gls |
| Normal Plot of Residuals from a gls Object |
| nlme::qqnorm.lm |
| Normal Plot of Residuals or Random Effects from an lme Object |
| nlme::quinModel |
| Model function for the Quinidine data |
| nlme::random.effects |
| Extract Random Effects |
| nlme::random.effects.lmList |
| Extract lmList Random Effects |
| nlme::ranef.lme |
| Extract lme Random Effects |
| nlme::reStruct |
| Random Effects Structure |
| nlme::recalc |
| Recalculate Condensed Linear Model Object |
| nlme::recalc.corStruct |
| Recalculate for corStruct Object |
| nlme::recalc.modelStruct |
| Recalculate for a modelStruct Object |
| nlme::recalc.reStruct |
| Recalculate for an reStruct Object |
| nlme::recalc.varFunc |
| Recalculate for varFunc Object |
| nlme::residuals.gls |
| Extract gls Residuals |
| nlme::residuals.glsStruct |
| Calculate glsStruct Residuals |
| nlme::residuals.gnlsStruct |
| Calculate gnlsStruct Residuals |
| nlme::residuals.lmList |
| Extract lmList Residuals |
| nlme::residuals.lme |
| Extract lme Residuals |
| nlme::residuals.lmeStruct |
| Calculate lmeStruct Residuals |
| nlme::residuals.nlmeStruct |
| Calculate nlmeStruct Residuals |
| nlme::simulate.lme |
| Simulate Results from 'lme' Models |
| nlme::solve.pdMat |
| Calculate Inverse of a Positive-Definite Matrix |
| nlme::solve.reStruct |
| Apply Solve to an reStruct Object |
| nlme::splitFormula |
| Split a Formula |
| nlme::summary.corStruct |
| Summarize a corStruct Object |
| nlme::summary.gls |
| Summarize a Generalized Least Squares 'gls' Object |
| nlme::summary.lmList |
| Summarize an lmList Object |
| nlme::summary.lme |
| Summarize an lme Object |
| nlme::summary.modelStruct |
| Summarize a modelStruct Object |
| nlme::summary.nlsList |
| Summarize an nlsList Object |
| nlme::summary.pdMat |
| Summarize a pdMat Object |
| nlme::summary.varFunc |
| Summarize "varFunc" Object |
| nlme::update.modelStruct |
| Update a modelStruct Object |
| nlme::update.varExp |
| Update varFunc Object |
| nlme::varClasses |
| Variance Function Classes |
| nlme::varComb |
| Combination of Variance Functions |
| nlme::varConstPower |
| Constant Plus Power Variance Function |
| nlme::varConstProp |
| Constant Plus Proportion Variance Function |
| nlme::varExp |
| Exponential Variance Function |
| nlme::varFixed |
| Fixed Variance Function |
| nlme::varFunc |
| Variance Function Structure |
| nlme::varIdent |
| Constant Variance Function |
| nlme::varPower |
| Power Variance Function |
| nlme::varWeights |
| Extract Variance Function Weights |
| nlme::varWeights.glsStruct |
| Variance Weights for glsStruct Object |
| nlme::varWeights.lmeStruct |
| Variance Weights for lmeStruct Object |
| nnet::class.ind |
| Generates Class Indicator Matrix from a Factor |
| nnet::multinom |
| Fit Multinomial Log-linear Models |
| nnet::nnetHess |
| Evaluates Hessian for a Neural Network |
| nnet::nnet |
| Fit Neural Networks |
| nnet::predict.nnet |
| Predict New Examples by a Trained Neural Net |
| nnet::which.is.max |
| Find Maximum Position in Vector |
| parallel::parallel-package |
| Support for Parallel Computation |
| parallel::nextRNGStream |
| Implementation of Pierre L'Ecuyer's RngStreams |
| parallel::splitIndices |
| Divide Tasks for Distribution in a Cluster |
| parallel::children |
| Low-level Functions for Management of Forked Processes |
| parallel::mcaffinity |
| Get or Set CPU Affinity Mask of the Current Process |
| parallel::mcfork |
| Fork a Copy of the Current R Process |
| parallel::mclapply |
| Parallel Versions of 'lapply' and 'mapply' using Forking |
| parallel::mccollect |
| Evaluate an R Expression Asynchronously in a Separate Process |
| parallel::pvec |
| Parallelize a Vector Map Function using Forking |
| rpart::car.test.frame |
| Automobile Data from 'Consumer Reports' 1990 |
| rpart::car90 |
| Automobile Data from 'Consumer Reports' 1990 |
| rpart::cu.summary |
| Automobile Data from 'Consumer Reports' 1990 |
| rpart::kyphosis |
| Data on Children who have had Corrective Spinal Surgery |
| rpart::labels.rpart |
| Create Split Labels For an Rpart Object |
| rpart::meanvar |
| Mean-Variance Plot for an Rpart Object |
| rpart::na.rpart |
| Handles Missing Values in an Rpart Object |
| rpart::path.rpart |
| Follow Paths to Selected Nodes of an Rpart Object |
| rpart::plot.rpart |
| Plot an Rpart Object |
| rpart::plotcp |
| Plot a Complexity Parameter Table for an Rpart Fit |
| rpart::post.rpart |
| PostScript Presentation Plot of an Rpart Object |
| rpart::predict.rpart |
| Predictions from a Fitted Rpart Object |
| rpart::print.rpart |
| Print an Rpart Object |
| rpart::printcp |
| Displays CP table for Fitted Rpart Object |
| rpart::prune.rpart |
| Cost-complexity Pruning of an Rpart Object |
| rpart::residuals.rpart |
| Residuals From a Fitted Rpart Object |
| rpart::rpart |
| Recursive Partitioning and Regression Trees |
| rpart::rpart.control |
| Control for Rpart Fits |
| rpart::rpart.exp |
| Initialization function for exponential fitting |
| rpart::rpart.object |
| Recursive Partitioning and Regression Trees Object |
| rpart::rsq.rpart |
| Plots the Approximate R-Square for the Different Splits |
| rpart::snip.rpart |
| Snip Subtrees of an Rpart Object |
| rpart::solder.balance |
| Soldering of Components on Printed-Circuit Boards |
| rpart::stagec |
| Stage C Prostate Cancer |
| rpart::summary.rpart |
| Summarize a Fitted Rpart Object |
| rpart::text.rpart |
| Place Text on a Dendrogram Plot |
| rpart::xpred.rpart |
| Return Cross-Validated Predictions |
| spatial::Kaver |
| Average K-functions from Simulations |
| spatial::Kenvl |
| Compute Envelope and Average of Simulations of K-fns |
| spatial::Kfn |
| Compute K-fn of a Point Pattern |
| spatial::Psim |
| Simulate Binomial Spatial Point Process |
| spatial::SSI |
| Simulates Sequential Spatial Inhibition Point Process |
| spatial::Strauss |
| Simulates Strauss Spatial Point Process |
| spatial::anova.trls |
| Anova tables for fitted trend surface objects |
| spatial::correlogram |
| Compute Spatial Correlograms |
| spatial::expcov |
| Spatial Covariance Functions |
| spatial::ppgetregion |
| Get Domain for Spatial Point Pattern Analyses |
| spatial::ppinit |
| Read a Point Process Object from a File |
| spatial::pplik |
| Pseudo-likelihood Estimation of a Strauss Spatial Point Process |
| spatial::ppregion |
| Set Domain for Spatial Point Pattern Analyses |
| spatial::predict.trls |
| Predict method for trend surface fits |
| spatial::prmat |
| Evaluate Kriging Surface over a Grid |
| spatial::semat |
| Evaluate Kriging Standard Error of Prediction over a Grid |
| spatial::surf.gls |
| Fits a Trend Surface by Generalized Least-squares |
| spatial::surf.ls |
| Fits a Trend Surface by Least-squares |
| spatial::trls.influence |
| Regression diagnostics for trend surfaces |
| spatial::trmat |
| Evaluate Trend Surface over a Grid |
| spatial::variogram |
| Compute Spatial Variogram |
| splines::asVector |
| Coerce an Object to a Vector |
| splines::backSpline |
| Monotone Inverse Spline |
| splines::bs |
| B-Spline Basis for Polynomial Splines |
| splines::interpSpline |
| Create an Interpolation Spline |
| splines::ns |
| Generate a Basis Matrix for Natural Cubic Splines |
| splines::periodicSpline |
| Create a Periodic Interpolation Spline |
| splines::polySpline |
| Piecewise Polynomial Spline Representation |
| splines::predict.bs |
| Evaluate a Spline Basis |
| splines::predict.bSpline |
| Evaluate a Spline at New Values of x |
| splines::splineDesign |
| Design Matrix for B-splines |
| splines::splineKnots |
| Knot Vector from a Spline |
| splines::splineOrder |
| Determine the Order of a Spline |
| splines::splines-package |
| Regression Spline Functions and Classes |
| splines::xyVector |
| Construct an 'xyVector' Object |
| stats::acf |
| Auto- and Cross- Covariance and -Correlation Function Estimation |
| stats::acf2AR |
| Compute an AR Process Exactly Fitting an ACF |
| stats::add1 |
| Add or Drop All Possible Single Terms to a Model |
| stats::addmargins |
| Puts Arbitrary Margins on Multidimensional Tables or Arrays |
| stats::aggregate |
| Compute Summary Statistics of Data Subsets |
| stats::AIC |
| Akaike's An Information Criterion |
| stats::alias |
| Find Aliases (Dependencies) in a Model |
| stats::anova.glm |
| Analysis of Deviance for Generalized Linear Model Fits |
| stats::anova.lm |
| ANOVA for Linear Model Fits |
| stats::anova.mlm |
| Comparisons between Multivariate Linear Models |
| stats::anova |
| Anova Tables |
| stats::ansari.test |
| Ansari-Bradley Test |
| stats::aov |
| Fit an Analysis of Variance Model |
| stats::approx |
| Interpolation Functions |
| stats::ar.ols |
| Fit Autoregressive Models to Time Series by OLS |
| stats::ar |
| Fit Autoregressive Models to Time Series |
| stats::arima |
| ARIMA Modelling of Time Series |
| stats::arima.sim |
| Simulate from an ARIMA Model |
| stats::arima0 |
| ARIMA Modelling of Time Series - Preliminary Version |
| stats::ARMAacf |
| Compute Theoretical ACF for an ARMA Process |
| stats::ARMAtoMA |
| Convert ARMA Process to Infinite MA Process |
| stats::as.hclust |
| Convert Objects to Class hclust |
| stats::asOneSidedFormula |
| Convert to One-Sided Formula |
| stats::ave |
| Group Averages Over Level Combinations of Factors |
| stats::bw.nrd0 |
| Bandwidth Selectors for Kernel Density Estimation |
| stats::bartlett.test |
| Bartlett Test of Homogeneity of Variances |
| stats::Beta |
| The Beta Distribution |
| stats::binom.test |
| Exact Binomial Test |
| stats::Binomial |
| The Binomial Distribution |
| stats::biplot.princomp |
| Biplot for Principal Components |
| stats::biplot |
| Biplot of Multivariate Data |
| stats::qbirthday |
| Probability of coincidences |
| stats::Box.test |
| Box-Pierce and Ljung-Box Tests |
| stats::cancor |
| Canonical Correlations |
| stats::case.names |
| Case and Variable Names of Fitted Models |
| stats::Cauchy |
| The Cauchy Distribution |
| stats::.checkMFClasses |
| Functions to Check the Type of Variables passed to Model Frames |
| stats::chisq.test |
| Pearson's Chi-squared Test for Count Data |
| stats::Chisquare |
| The (non-central) Chi-Squared Distribution |
| stats::cmdscale |
| Classical (Metric) Multidimensional Scaling |
| stats::coef |
| Extract Model Coefficients |
| stats::complete.cases |
| Find Complete Cases |
| stats::confint |
| Confidence Intervals for Model Parameters |
| stats::constrOptim |
| Linearly Constrained Optimization |
| stats::contr.helmert |
| (Possibly Sparse) Contrast Matrices |
| stats::contrasts |
| Get and Set Contrast Matrices |
| stats::convolve |
| Convolution of Sequences via FFT |
| stats::cophenetic |
| Cophenetic Distances for a Hierarchical Clustering |
| stats::var |
| Correlation, Variance and Covariance (Matrices) |
| stats::cor.test |
| Test for Association/Correlation Between Paired Samples |
| stats::cov.wt |
| Weighted Covariance Matrices |
| stats::cpgram |
| Plot Cumulative Periodogram |
| stats::cutree |
| Cut a Tree into Groups of Data |
| stats::decompose |
| Classical Seasonal Decomposition by Moving Averages |
| stats::reformulate |
| Modify Terms Objects |
| stats::dendrapply |
| Apply a Function to All Nodes of a Dendrogram |
| stats::dendrogram |
| General Tree Structures |
| stats::density |
| Kernel Density Estimation |
| stats::D |
| Symbolic and Algorithmic Derivatives of Simple Expressions |
| stats::deviance |
| Model Deviance |
| stats::df.residual |
| Residual Degrees-of-Freedom |
| stats::diffinv |
| Discrete Integration: Inverse of Differencing |
| stats::dist |
| Distance Matrix Computation |
| stats::distribution |
| Distributions in the stats package |
| stats::dummy.coef |
| Extract Coefficients in Original Coding |
| stats::ecdf |
| Empirical Cumulative Distribution Function |
| stats::eff.aovlist |
| Compute Efficiencies of Multistratum Analysis of Variance |
| stats::effects |
| Effects from Fitted Model |
| stats::embed |
| Embedding a Time Series |
| stats::expand.model.frame |
| Add new variables to a model frame |
| stats::Exponential |
| The Exponential Distribution |
| stats::extractAIC |
| Extract AIC from a Fitted Model |
| stats::factanal |
| Factor Analysis |
| stats::add.scope |
| Compute Allowed Changes in Adding to or Dropping from a Formula |
| stats::family |
| Family Objects for Models |
| stats::FDist |
| The F Distribution |
| stats::fft |
| Fast Discrete Fourier Transform (FFT) |
| stats::filter |
| Linear Filtering on a Time Series |
| stats::fisher.test |
| Fisher's Exact Test for Count Data |
| stats::fitted.values |
| Extract Model Fitted Values |
| stats::fivenum |
| Tukey Five-Number Summaries |
| stats::fligner.test |
| Fligner-Killeen Test of Homogeneity of Variances |
| stats::formula.nls |
| Extract Model Formula from nls Object |
| stats::formula |
| Model Formulae |
| stats::friedman.test |
| Friedman Rank Sum Test |
| stats::ftable.formula |
| Formula Notation for Flat Contingency Tables |
| stats::ftable |
| Flat Contingency Tables |
| stats::GammaDist |
| The Gamma Distribution |
| stats::Geometric |
| The Geometric Distribution |
| stats::getInitial |
| Get Initial Parameter Estimates |
| stats::glm.control |
| Auxiliary for Controlling GLM Fitting |
| stats::glm |
| Fitting Generalized Linear Models |
| stats::family.glm |
| Accessing Generalized Linear Model Fits |
| stats::hclust |
| Hierarchical Clustering |
| stats::heatmap |
| Draw a Heat Map |
| stats::HoltWinters |
| Holt-Winters Filtering |
| stats::Hypergeometric |
| The Hypergeometric Distribution |
| stats::identify.hclust |
| Identify Clusters in a Dendrogram |
| stats::influence.measures |
| Regression Deletion Diagnostics |
| stats::integrate |
| Integration of One-Dimensional Functions |
| stats::interaction.plot |
| Two-way Interaction Plot |
| stats::IQR |
| The Interquartile Range |
| stats::is.empty.model |
| Test if a Model's Formula is Empty |
| stats::isoreg |
| Isotonic / Monotone Regression |
| stats::KalmanLike |
| Kalman Filtering |
| stats::kernapply |
| Apply Smoothing Kernel |
| stats::kernel |
| Smoothing Kernel Objects |
| stats::kmeans |
| K-Means Clustering |
| stats::kruskal.test |
| Kruskal-Wallis Rank Sum Test |
| stats::ks.test |
| Kolmogorov-Smirnov Tests |
| stats::ksmooth |
| Kernel Regression Smoother |
| stats::lag.plot |
| Time Series Lag Plots |
| stats::lag |
| Lag a Time Series |
| stats::line |
| Robust Line Fitting |
| stats::lm.influence |
| Regression Diagnostics |
| stats::lm |
| Fitting Linear Models |
| stats::family.lm |
| Accessing Linear Model Fits |
| stats::lm.fit |
| Fitter Functions for Linear Models |
| stats::loadings |
| Print Loadings in Factor Analysis |
| stats::loess.control |
| Set Parameters for Loess |
| stats::loess |
| Local Polynomial Regression Fitting |
| stats::Logistic |
| The Logistic Distribution |
| stats::logLik |
| Extract Log-Likelihood |
| stats::loglin |
| Fitting Log-Linear Models |
| stats::Lognormal |
| The Log Normal Distribution |
| stats::lowess |
| Scatter Plot Smoothing |
| stats::ls.diag |
| Compute Diagnostics for 'lsfit' Regression Results |
| stats::ls.print |
| Print 'lsfit' Regression Results |
| stats::lsfit |
| Find the Least Squares Fit |
| stats::mad |
| Median Absolute Deviation |
| stats::mahalanobis |
| Mahalanobis Distance |
| stats::make.link |
| Create a Link for GLM Families |
| stats::makepredictcall |
| Utility Function for Safe Prediction |
| stats::manova |
| Multivariate Analysis of Variance |
| stats::mantelhaen.test |
| Cochran-Mantel-Haenszel Chi-Squared Test for Count Data |
| stats::mauchly.test |
| Mauchly's Test of Sphericity |
| stats::mcnemar.test |
| McNemar's Chi-squared Test for Count Data |
| stats::median |
| Median Value |
| stats::medpolish |
| Median Polish (Robust Twoway Decomposition) of a Matrix |
| stats::model.extract |
| Extract Components from a Model Frame |
| stats::model.frame |
| Extracting the Model Frame from a Formula or Fit |
| stats::model.matrix |
| Construct Design Matrices |
| stats::model.tables |
| Compute Tables of Results from an Aov Model Fit |
| stats::monthplot |
| Plot a Seasonal or other Subseries from a Time Series |
| stats::mood.test |
| Mood Two-Sample Test of Scale |
| stats::Multinomial |
| The Multinomial Distribution |
| stats::na.action |
| NA Action |
| stats::na.contiguous |
| Find Longest Contiguous Stretch of non-NAs |
| stats::na.fail |
| Handle Missing Values in Objects |
| stats::naresid |
| Adjust for Missing Values |
| stats::naprint |
| Adjust for Missing Values |
| stats::NegBinomial |
| The Negative Binomial Distribution |
| stats::nextn |
| Find Highly Composite Numbers |
| stats::nlm |
| Non-Linear Minimization |
| stats::nlminb |
| Optimization using PORT routines |
| stats::nls.control |
| Control the Iterations in nls |
| stats::nls |
| Nonlinear Least Squares |
| stats::NLSstAsymptotic |
| Fit the Asymptotic Regression Model |
| stats::NLSstClosestX |
| Inverse Interpolation |
| stats::NLSstLfAsymptote |
| Horizontal Asymptote on the Left Side |
| stats::NLSstRtAsymptote |
| Horizontal Asymptote on the Right Side |
| stats::nobs |
| Extract the Number of Observations from a Fit. |
| stats::Normal |
| The Normal Distribution |
| stats::numericDeriv |
| Evaluate Derivatives Numerically |
| stats::offset |
| Include an Offset in a Model Formula |
| stats::oneway.test |
| Test for Equal Means in a One-Way Layout |
| stats::optim |
| General-purpose Optimization |
| stats::optimize |
| One Dimensional Optimization |
| stats::order.dendrogram |
| Ordering or Labels of the Leaves in a Dendrogram |
| stats::p.adjust |
| Adjust P-values for Multiple Comparisons |
| stats::pairwise.prop.test |
| Pairwise comparisons for proportions |
| stats::pairwise.t.test |
| Pairwise t tests |
| stats::pairwise.table |
| Tabulate p values for pairwise comparisons |
| stats::pairwise.wilcox.test |
| Pairwise Wilcoxon Rank Sum Tests |
| stats::plot.acf |
| Plot Autocovariance and Autocorrelation Functions |
| stats::plot.density |
| Plot Method for Kernel Density Estimation |
| stats::plot.HoltWinters |
| Plot function for HoltWinters objects |
| stats::plot.isoreg |
| Plot Method for isoreg Objects |
| stats::plot.lm |
| Plot Diagnostics for an 'lm' Object |
| stats::plot.ppr |
| Plot Ridge Functions for Projection Pursuit Regression Fit |
| stats::plot.profile.nls |
| Plot a profile.nls Object |
| stats::plot.spec |
| Plotting Spectral Densities |
| stats::plot.stepfun |
| Plot Step Functions |
| stats::plot.ts |
| Plotting Time-Series Objects |
| stats::Poisson |
| The Poisson Distribution |
| stats::poisson.test |
| Exact Poisson tests |
| stats::poly |
| Compute Orthogonal Polynomials |
| stats::power.anova.test |
| Power Calculations for Balanced One-Way Analysis of Variance Tests |
| stats::power.prop.test |
| Power Calculations for Two-Sample Test for Proportions |
| stats::power |
| Create a Power Link Object |
| stats::power.t.test |
| Power calculations for one and two sample t tests |
| stats::PP.test |
| Phillips-Perron Test for Unit Roots |
| stats::ppoints |
| Ordinates for Probability Plotting |
| stats::ppr |
| Projection Pursuit Regression |
| stats::prcomp |
| Principal Components Analysis |
| stats::predict.Arima |
| Forecast from ARIMA fits |
| stats::predict.glm |
| Predict Method for GLM Fits |
| stats::predict.HoltWinters |
| Prediction Function for Fitted Holt-Winters Models |
| stats::predict.lm |
| Predict method for Linear Model Fits |
| stats::predict.loess |
| Predict Loess Curve or Surface |
| stats::predict.nls |
| Predicting from Nonlinear Least Squares Fits |
| stats::predict |
| Model Predictions |
| stats::predict.smooth.spline |
| Predict from Smoothing Spline Fit |
| stats::preplot |
| Pre-computations for a Plotting Object |
| stats::princomp |
| Principal Components Analysis |
| stats::print.htest |
| Print Methods for Hypothesis Tests and Power Calculation Objects |
| stats::.preformat.ts |
| Printing and Formatting of Time-Series Objects |
| stats::printCoefmat |
| Print Coefficient Matrices |
| stats::profile.nls |
| Method for Profiling nls Objects |
| stats::profile |
| Generic Function for Profiling Models |
| stats::proj |
| Projections of Models |
| stats::prop.test |
| Test of Equal or Given Proportions |
| stats::prop.trend.test |
| Test for trend in proportions |
| stats::qqnorm |
| Quantile-Quantile Plots |
| stats::quade.test |
| Quade Test |
| stats::quantile |
| Sample Quantiles |
| stats::r2dtable |
| Random 2-way Tables with Given Marginals |
| stats::read.ftable |
| Manipulate Flat Contingency Tables |
| stats::rect.hclust |
| Draw Rectangles Around Hierarchical Clusters |
| stats::relevel |
| Reorder Levels of Factor |
| stats::reorder.dendrogram |
| Reorder a Dendrogram |
| stats::reorder |
| Reorder Levels of a Factor |
| stats::replications |
| Number of Replications of Terms |
| stats::reshape |
| Reshape Grouped Data |
| stats::residuals |
| Extract Model Residuals |
| stats::runmed |
| Running Medians - Robust Scatter Plot Smoothing |
| stats::rWishart |
| Random Wishart Distributed Matrices |
| stats::scatter.smooth |
| Scatter Plot with Smooth Curve Fitted by Loess |
| stats::screeplot |
| Screeplots |
| stats::sd |
| Standard Deviation |
| stats::se.contrast |
| Standard Errors for Contrasts in Model Terms |
| stats::selfStart |
| Construct Self-starting Nonlinear Models |
| stats::setNames |
| Set the Names in an Object |
| stats::shapiro.test |
| Shapiro-Wilk Normality Test |
| stats::sigma |
| Extract Residual Standard Deviation 'Sigma' |
| stats::SignRank |
| Distribution of the Wilcoxon Signed Rank Statistic |
| stats::simulate |
| Simulate Responses |
| stats::smooth |
| Tukey's (Running Median) Smoothing |
| stats::smooth.spline |
| Fit a Smoothing Spline |
| stats::smoothEnds |
| End Points Smoothing (for Running Medians) |
| stats::sortedXyData |
| Create a 'sortedXyData' Object |
| stats::spec.ar |
| Estimate Spectral Density of a Time Series from AR Fit |
| stats::spec.pgram |
| Estimate Spectral Density of a Time Series by a Smoothed Periodogram |
| stats::spec.taper |
| Taper a Time Series by a Cosine Bell |
| stats::spectrum |
| Spectral Density Estimation |
| stats::spline |
| Interpolating Splines |
| stats::SSasymp |
| Self-Starting Nls Asymptotic Regression Model |
| stats::SSasympOff |
| Self-Starting Nls Asymptotic Regression Model with an Offset |
| stats::SSasympOrig |
| Self-Starting Nls Asymptotic Regression Model through the Origin |
| stats::SSbiexp |
| Self-Starting Nls Biexponential model |
| stats::SSD |
| SSD Matrix and Estimated Variance Matrix in Multivariate Models |
| stats::SSfol |
| Self-Starting Nls First-order Compartment Model |
| stats::SSfpl |
| Self-Starting Nls Four-Parameter Logistic Model |
| stats::SSgompertz |
| Self-Starting Nls Gompertz Growth Model |
| stats::SSlogis |
| Self-Starting Nls Logistic Model |
| stats::SSmicmen |
| Self-Starting Nls Michaelis-Menten Model |
| stats::SSweibull |
| Self-Starting Nls Weibull Growth Curve Model |
| stats::start |
| Encode the Terminal Times of Time Series |
| stats::stat.anova |
| GLM Anova Statistics |
| stats::stats-deprecated |
| Deprecated Functions in Package 'stats' |
| stats::stats-package |
| The R Stats Package |
| stats::step |
| Choose a model by AIC in a Stepwise Algorithm |
| stats::stepfun |
| Step Functions - Creation and Class |
| stats::stl |
| Seasonal Decomposition of Time Series by Loess |
| stats::plot.stl |
| Methods for STL Objects |
| stats::StructTS |
| Fit Structural Time Series |
| stats::summary.aov |
| Summarize an Analysis of Variance Model |
| stats::summary.glm |
| Summarizing Generalized Linear Model Fits |
| stats::summary.lm |
| Summarizing Linear Model Fits |
| stats::summary.manova |
| Summary Method for Multivariate Analysis of Variance |
| stats::summary.nls |
| Summarizing Non-Linear Least-Squares Model Fits |
| stats::summary.princomp |
| Summary method for Principal Components Analysis |
| stats::supsmu |
| Friedman's SuperSmoother |
| stats::symnum |
| Symbolic Number Coding |
| stats::t.test |
| Student's t-Test |
| stats::TDist |
| The Student t Distribution |
| stats::termplot |
| Plot Regression Terms |
| stats::terms.formula |
| Construct a terms Object from a Formula |
| stats::terms.object |
| Description of Terms Objects |
| stats::terms |
| Model Terms |
| stats::time |
| Sampling Times of Time Series |
| stats::toeplitz |
| Form Symmetric Toeplitz Matrix |
| stats::diff.ts |
| Methods for Time Series Objects |
| stats::ts.plot |
| Plot Multiple Time Series |
| stats::ts |
| Time-Series Objects |
| stats::ts.union |
| Bind Two or More Time Series |
| stats::tsdiag |
| Diagnostic Plots for Time-Series Fits |
| stats::tsp |
| Tsp Attribute of Time-Series-like Objects |
| stats::tsSmooth |
| Use Fixed-Interval Smoothing on Time Series |
| stats::Tukey |
| The Studentized Range Distribution |
| stats::TukeyHSD |
| Compute Tukey Honest Significant Differences |
| stats::Uniform |
| The Uniform Distribution |
| stats::uniroot |
| One Dimensional Root (Zero) Finding |
| stats::update.formula |
| Model Updating |
| stats::update |
| Update and Re-fit a Model Call |
| stats::var.test |
| F Test to Compare Two Variances |
| stats::promax |
| Rotation Methods for Factor Analysis |
| stats::vcov |
| Calculate Variance-Covariance Matrix for a Fitted Model Object |
| stats::Weibull |
| The Weibull Distribution |
| stats::weighted.mean |
| Weighted Arithmetic Mean |
| stats::weighted.residuals |
| Compute Weighted Residuals |
| stats::weights |
| Extract Model Weights |
| stats::wilcox.test |
| Wilcoxon Rank Sum and Signed Rank Tests |
| stats::Wilcoxon |
| Distribution of the Wilcoxon Rank Sum Statistic |
| stats::window |
| Time (Series) Windows |
| stats::xtabs |
| Cross Tabulation |
| stats::C |
| Sets Contrasts for a Factor |
| stats4::coef-methods |
| Methods for Function 'coef' in Package 'stats4' |
| stats4::confint-methods |
| Methods for Function 'confint' in Package 'stats4' |
| stats4::logLik-methods |
| Methods for Function 'logLik' in Package 'stats4' |
| stats4::mle-class |
| Class '"mle"' for Results of Maximum Likelihood Estimation |
| stats4::mle |
| Maximum Likelihood Estimation |
| stats4::plot-methods |
| Methods for Function 'plot' in Package 'stats4' |
| stats4::profile-methods |
| Methods for Function 'profile' in Package 'stats4' |
| stats4::profile.mle-class |
| Class '"profile.mle"'; Profiling information for '"mle"' object |
| stats4::show-methods |
| Methods for Function 'show' in Package 'stats4' |
| stats4::stats4-package |
| Statistical Functions using S4 Classes |
| stats4::summary-methods |
| Methods for Function 'summary' in Package 'stats4' |
| stats4::summary.mle-class |
| Class '"summary.mle"', Summary of '"mle"' Objects |
| stats4::update-methods |
| Methods for Function 'update' in Package 'stats4' |
| stats4::vcov-methods |
| Methods for Function 'vcov' in Package 'stats4' |
| survival::Surv |
| Create a Survival Object |
| survival::Surv2 |
| Create a survival object |
| survival::Surv2data |
| Convert data from timecourse to (time1,time2) style |
| survival::Math.Surv |
| Methods for Surv objects |
| survival::aareg |
| Aalen's additive regression model for censored data |
| survival::aeqSurv |
| Adjudicate near ties in a Surv object |
| survival::aggregate.survfit |
| Average survival curves |
| survival::agreg.fit |
| Cox model fitting functions |
| survival::aml |
| Acute Myelogenous Leukemia survival data |
| survival::anova.coxph |
| Analysis of Deviance for a Cox model. |
| survival::attrassign.default |
| Create new-style "assign" attribute |
| survival::basehaz |
| Alias for the survfit function |
| survival::bladder |
| Bladder Cancer Recurrences |
| survival::blogit |
| Bounded link functions |
| survival::cch |
| Fits proportional hazards regression model to case-cohort data |
| survival::cgd |
| Chronic Granulotamous Disease data |
| survival::cgd0 |
| Chronic Granulotomous Disease data |
| survival::clogit |
| Conditional logistic regression |
| survival::cluster |
| Identify clusters. |
| survival::colon |
| Chemotherapy for Stage B/C colon cancer |
| survival::concordance |
| Compute the concordance statistic for data or a model |
| survival::concordancefit |
| Compute the concordance |
| survival::cox.zph |
| Test the Proportional Hazards Assumption of a Cox Regression |
| survival::coxph |
| Fit Proportional Hazards Regression Model |
| survival::coxph.control |
| Ancillary arguments for controlling coxph fits |
| survival::coxph.detail |
| Details of a Cox Model Fit |
| survival::coxph.object |
| Proportional Hazards Regression Object |
| survival::coxph.wtest |
| Compute a quadratic form |
| survival::coxphms.object |
| Multi-state Proportional Hazards Regression Object |
| survival::coxsurv.fit |
| A direct interface to the 'computational engine' of survfit.coxph |
| survival::diabetic |
| Ddiabetic retinopathy |
| survival::dsurvreg |
| Distributions available in survreg. |
| survival::finegray |
| Create data for a Fine-Gray model |
| survival::flchain |
| Assay of serum free light chain for 7874 subjects. |
| survival::frailty |
| Random effects terms |
| survival::gbsg |
| Breast cancer data sets used in Royston and Altman (2013) |
| survival::jasa1 |
| Stanford Heart Transplant data |
| survival::is.ratetable |
| Verify that an object is of class ratetable. |
| survival::kidney |
| Kidney catheter data |
| survival::levels.Surv |
| Return the states of a multi-state Surv object |
| survival::lines.survfit |
| Add Lines or Points to a Survival Plot |
| survival::logLik.coxph |
| logLik method for a Cox model |
| survival::logan |
| Data from the 1972-78 GSS data used by Logan |
| survival::cancer |
| NCCTG Lung Cancer Data |
| survival::mgus |
| Monoclonal gammopathy data |
| survival::mgus2 |
| Monoclonal gammopathy data |
| survival::model.frame.coxph |
| Model.frame method for coxph objects |
| survival::model.matrix.coxph |
| Model.matrix method for coxph models |
| survival::myeloid |
| Acute myeloid leukemia |
| survival::myeloma |
| Survival times of patients with multiple myeloma |
| survival::nafld1 |
| Non-alcohol fatty liver disease |
| survival::neardate |
| Find the index of the closest value in data set 2, for each entry in data set one. |
| survival::nsk |
| Natural splines with knot heights as the basis. |
| survival::nwtco |
| Data from the National Wilm's Tumor Study |
| survival::ovarian |
| Ovarian Cancer Survival Data |
| survival::pbc |
| Mayo Clinic Primary Biliary Cholangitis Data |
| survival::pbcseq |
| Mayo Clinic Primary Biliary Cirrhosis, sequential data |
| survival::plot.cox.zph |
| Graphical Test of Proportional Hazards |
| survival::plot.survfit |
| Plot method for 'survfit' objects |
| survival::predict.coxph |
| Predictions for a Cox model |
| survival::predict.survreg |
| Predicted Values for a 'survreg' Object |
| survival::print.aareg |
| Print an aareg object |
| survival::print.summary.survexp |
| Print Survexp Summary |
| survival::print.summary.survfit |
| Print Survfit Summary |
| survival::print.survfit |
| Print a Short Summary of a Survival Curve |
| survival::pseudo |
| Pseudo values for survival. |
| survival::pspline |
| Smoothing splines using a pspline basis |
| survival::pyears |
| Person Years |
| survival::quantile.survfit |
| Quantiles from a survfit object |
| survival::ratetable |
| Allow ratetable() terms in a model |
| survival::ratetableDate |
| Convert date objects to ratetable form |
| survival::rats |
| Rat treatment data from Mantel et al |
| survival::rats2 |
| Rat data from Gail et al. |
| survival::reliability |
| Reliability data sets |
| survival::residuals.coxph.penal |
| Calculate Residuals for a 'coxph' Fit |
| survival::residuals.survreg |
| Compute Residuals for 'survreg' Objects |
| survival::retinopathy |
| Diabetic Retinopathy |
| survival::rhDNase |
| rhDNASE data set |
| survival::ridge |
| Ridge regression |
| survival::rotterdam |
| Breast cancer data set used in Royston and Altman (2013) |
| survival::royston |
| Compute Royston's D for a Cox model |
| survival::rttright |
| Compute redistribute-to-the-right weights |
| survival::solder |
| Data from a soldering experiment |
| survival::stanford2 |
| More Stanford Heart Transplant data |
| survival::statefig |
| Draw a state space figure. |
| survival::strata |
| Identify Stratification Variables |
| survival::summary.aareg |
| Summarize an aareg fit |
| survival::summary.coxph |
| Summary method for Cox models |
| survival::summary.pyears |
| Summary function for pyears objecs |
| survival::summary.survexp |
| Summary function for a survexp object |
| survival::summary.survfit |
| Summary of a Survival Curve |
| survival::survSplit |
| Split a survival data set at specified times |
| survival::survcheck |
| Checks of a survival data set |
| survival::survcondense |
| Shorten a (time1, time2) survival dataset |
| survival::survdiff |
| Test Survival Curve Differences |
| survival::survexp |
| Compute Expected Survival |
| survival::survexp.fit |
| Compute Expected Survival |
| survival::survexp.object |
| Expected Survival Curve Object |
| survival::survexp.us |
| Census Data Sets for the Expected Survival and Person Years Functions |
| survival::survfit |
| Create survival curves |
| survival::survfit.coxph |
| Compute a Survival Curve from a Cox model |
| survival::survfit.formula |
| Compute a Survival Curve for Censored Data |
| survival::survfit.matrix |
| Create Aalen-Johansen estimates of multi-state survival from a matrix of hazards. |
| survival::survfit.object |
| Survival Curve Object |
| survival::survfit0 |
| Convert the format of a survfit object. |
| survival::survfitcoxph.fit |
| A direct interface to the 'computational engine' of survfit.coxph |
| survival::survival-deprecated |
| Deprecated functions in package 'survival' |
| survival::survival-internal |
| Internal survival functions |
| survival::survobrien |
| O'Brien's Test for Association of a Single Variable with Survival |
| survival::survreg |
| Regression for a Parametric Survival Model |
| survival::survreg.control |
| Package options for survreg and coxph |
| survival::survreg.distributions |
| Parametric Survival Distributions |
| survival::survreg.object |
| Parametric Survival Model Object |
| survival::survregDtest |
| Verify a survreg distribution |
| survival::tcut |
| Factors for person-year calculations |
| survival::tmerge |
| Time based merge for survival data |
| survival::tobin |
| Tobin's Tobit data |
| survival::transplant |
| Liver transplant waiting list |
| survival::udca |
| Data from a trial of usrodeoxycholic acid |
| survival::untangle.specials |
| Help Process the 'specials' Argument of the 'terms' Function. |
| survival::uspop2 |
| Projected US Population |
| survival::vcov.coxph |
| Variance-covariance matrix |
| survival::veteran |
| Veterans' Administration Lung Cancer study |
| survival::xtfrm.Surv |
| Sorting order for Surv objects |
| survival::yates |
| Population prediction |
| survival::yates_setup |
| Method for adding new models to the 'yates' function. |
| tcltk::TclInterface |
| Low-level Tcl/Tk Interface |
| tcltk::tclServiceMode |
| Allow Tcl events to be serviced or not |
| tcltk::tcltk-package |
| Tcl/Tk Interface |
| tcltk::tk_choose.dir |
| Choose a Folder Interactively |
| tcltk::tk_choose.files |
| Choose a List of Files Interactively |
| tcltk::tk_messageBox |
| Tk Message Box |
| tcltk::tk_select.list |
| Select Items from a List |
| tcltk::TkCommands |
| Tk non-widget commands |
| tcltk::tkpager |
| Page file using Tk text widget |
| tcltk::tkProgressBar |
| Progress Bars via Tk |
| tcltk::tkStartGUI |
| Tcl/Tk GUI startup |
| tcltk::TkWidgetcmds |
| Tk widget commands |
| tcltk::TkWidgets |
| Tk widgets |
| tools::add_datalist |
| Add a 'datalist' File to a Source Package |
| tools::assertCondition |
| Asserting Error Conditions |
| tools::bibstyle |
| Select or Define a Bibliography Style |
| tools::buildVignette |
| Build One Vignette |
| tools::buildVignettes |
| List and Build Package Vignettes |
| tools::Adobe_glyphs |
| Conversion Tables between Character Sets |
| tools::check_packages_in_dir |
| Check Source Packages and Their Reverse Dependencies |
| tools::checkFF |
| Check Foreign Function Calls |
| tools::checkMD5sums |
| Check and Create MD5 Checksum Files |
| tools::checkPoFile |
| Check Translation Files for Inconsistent Format Strings |
| tools::checkRd |
| Check an Rd Object |
| tools::checkRdaFiles |
| Report on Details of Saved Images or Re-saves them |
| tools::checkTnF |
| Check R Packages or Code for T/F |
| tools::checkVignettes |
| Check Package Vignettes |
| tools::codoc |
| Check Code/Documentation Consistency |
| tools::compactPDF |
| Compact PDF Files |
| tools::delimMatch |
| Delimited Pattern Matching |
| tools::dependsOnPkgs |
| Find Reverse Dependencies |
| tools::encoded_text_to_latex |
| Translate non-ASCII Text to LaTeX Escapes |
| tools::file_ext |
| File Utilities |
| tools::getVignetteInfo |
| Get Information on Installed Vignettes |
| tools::HTMLheader |
| Generate a Standard HTML Header for R Help |
| tools::findHTMLlinks |
| Collect HTML Links from Package Documentation |
| tools::loadRdMacros |
| Load User-defined Rd Help System Macros |
| tools::make_translations_pkg |
| Package the Current Translations in the R Sources |
| tools::makeLazyLoading |
| Lazy Loading of Packages |
| tools::makevars_user |
| User and Site Compilation Variables |
| tools::md5sum |
| Compute MD5 Checksums |
| tools::package_dependencies |
| Computations on the Dependency Hierarchy of Packages |
| tools::parse_Rd |
| Parse an Rd File |
| tools::parseLatex |
| Experimental Functions to Work with LaTeX Code |
| tools::.print.via.format |
| Printing Utilities |
| tools::pskill |
| Kill a Process |
| tools::psnice |
| Get or Set the Priority (Niceness) of a Process |
| tools::QC |
| QC Checks for R Code and/or Documentation |
| tools::Rcmd |
| R CMD Interface |
| tools::Rd2txt |
| Rd Converters |
| tools::Rd2txt_options |
| Set Formatting Options for Text Help |
| tools::Rdiff |
| Difference R Output Files |
| tools::Rdindex |
| Generate Index from Rd Files |
| tools::RdTextFilter |
| Select Text in an Rd File |
| tools::Rd_db |
| Rd Utilities |
| tools::read.00Index |
| Read 00Index-style Files |
| tools::showNonASCII |
| Pick Out Non-ASCII Characters |
| tools::startDynamicHelp |
| Start the Dynamic HTML Help System |
| tools::SweaveTeXFilter |
| Strip R Code out of Sweave File |
| tools::testInstalledPackage |
| Test Installed Packages |
| tools::texi2dvi |
| Compile LaTeX Files |
| tools::toHTML |
| Display an Object in HTML |
| tools::tools-deprecated |
| Deprecated Objects in Package 'tools' |
| tools::tools-package |
| Tools for Package Development |
| tools::toRd |
| Generic Function to Convert Object to a Fragment of Rd Code |
| tools::undoc |
| Find Undocumented Objects |
| tools::update_pkg_po |
| Prepare Translations for a Package |
| tools::update_PACKAGES |
| Update Existing PACKAGES Files |
| tools::vignetteEngine |
| Set or Get a Vignette Processing Engine |
| tools::vignetteInfo |
| Basic Information about a Vignette |
| tools::write_PACKAGES |
| Generate PACKAGES Files |
| tools::xgettext |
| Extract Translatable Messages from R Files in a Package |
| utils::adist |
| Approximate String Distances |
| utils::alarm |
| Alert the User |
| utils::apropos |
| Find Objects by (Partial) Name |
| utils::aregexec |
| Approximate String Match Positions |
| utils::arrangeWindows |
| Rearrange Windows on MS Windows |
| utils::askYesNo |
| Ask a Yes/No Question |
| utils::aspell-utils |
| Spell Check Utilities |
| utils::aspell |
| Spell Check Interface |
| utils::available.packages |
| List Available Packages at CRAN-like Repositories |
| utils::BATCH |
| Batch Execution of R |
| utils::bibentry |
| Bibliography Entries |
| utils::browseEnv |
| Browse Objects in Environment |
| utils::browseURL |
| Load URL into an HTML Browser |
| utils::browseVignettes |
| List Vignettes in an HTML Browser |
| utils::bug.report |
| Send a Bug Report |
| utils::capture.output |
| Send Output to a Character String or File |
| utils::fileSnapshot |
| Detect which Files Have Changed |
| utils::choose.dir |
| Choose a Folder Interactively on MS Windows |
| utils::choose.files |
| Choose a List of Files Interactively on MS Windows |
| utils::chooseBioCmirror |
| Select a Bioconductor Mirror |
| utils::chooseCRANmirror |
| Select a CRAN Mirror |
| utils::CITATION |
| Citing R and R Packages in Publications |
| utils::cite |
| Cite a Bibliography Entry |
| utils::citEntry |
| Bibliography Entries (Older Interface) |
| utils::getClipboardFormats |
| Read/Write to/from the Clipboard in MS Windows |
| utils::close.socket |
| Close a Socket |
| utils::combn |
| Generate All Combinations of n Elements, Taken m at a Time |
| utils::compareVersion |
| Compare Two Package Version Numbers |
| utils::COMPILE |
| Compile Files for Use with R on Unix-alikes |
| utils::contrib.url |
| Find Appropriate Paths in CRAN-like Repositories |
| utils::count.fields |
| Count the Number of Fields per Line |
| utils::create.post |
| Ancillary Function for Preparing Emails and Postings |
| utils::data |
| Data Sets |
| utils::data.entry |
| Spreadsheet Interface for Entering Data |
| utils::debugcall |
| Debug a Call |
| utils::debugger |
| Post-Mortem Debugging |
| utils::demo |
| Demonstrations of R Functionality |
| utils::DLL.version |
| DLL Version Information on MS Windows |
| utils::download.file |
| Download File from the Internet |
| utils::download.packages |
| Download Packages from CRAN-like Repositories |
| utils::edit.data.frame |
| Edit Data Frames and Matrices |
| utils::edit |
| Invoke a Text Editor |
| utils::example |
| Run an Examples Section from the Online Help |
| utils::file.edit |
| Edit One or More Files |
| utils::file_test |
| Shell-style Tests on Files |
| utils::findCRANmirror |
| Find CRAN Mirror Preference |
| utils::findLineNum |
| Find the Location of a Line of Source Code, or Set a Breakpoint There |
| utils::fix |
| Fix an Object |
| utils::flush.console |
| Flush Output to a Console |
| utils::formatUL |
| Format Unordered and Ordered Lists |
| utils::getAnywhere |
| Retrieve an R Object, Including from a Namespace |
| utils::assignInNamespace |
| Utility Functions for Developing Namespaces |
| utils::getParseData |
| Get Detailed Parse Information from Object |
| utils::getS3method |
| Get an S3 Method |
| utils::getWindowsHandle |
| Get a Windows Handle |
| utils::getWindowsHandles |
| Get handles of Windows in the MS Windows RGui |
| utils::glob2rx |
| Change Wildcard or Globbing Pattern into Regular Expression |
| utils::globalVariables |
| Declarations Used in Checking a Package |
| utils::hashtab |
| Hash Tables (Experimental) |
| utils::hasName |
| Check for Name |
| utils::head |
| Return the First or Last Parts of an Object |
| utils::help |
| Documentation |
| utils::help.request |
| Send a Post to R-help |
| utils::help.search |
| Search the Help System |
| utils::help.start |
| Hypertext Documentation |
| utils::hsearch_db |
| Help Search Utilities |
| utils::install.packages |
| Install Packages from Repositories or Local Files |
| utils::INSTALL |
| Install Add-on Packages |
| utils::installed.packages |
| Find Installed Packages |
| utils::isS3method |
| Is 'method' the Name of an S3 Method? |
| utils::isS3stdGeneric |
| Check if a Function Acts as an S3 Generic |
| utils::LINK |
| Create Executable Programs on Unix-alikes |
| utils::localeToCharset |
| Select a Suitable Encoding Name from a Locale Name |
| utils::ls.str |
| List Objects and their Structure |
| utils::maintainer |
| Show Package Maintainer |
| utils::make.packages.html |
| Update HTML Package List |
| utils::make.socket |
| Create a Socket Connection |
| utils::memory.size |
| Report on Memory Allocation (no longer supported) |
| utils::menu |
| Menu Interaction Function |
| utils::.S3methods |
| List Methods for S3 Generic Functions or Classes |
| utils::mirrorAdmin |
| Managing Repository Mirrors |
| utils::modifyList |
| Recursively Modify Elements of a List |
| utils::nsl |
| Look up the IP Address by Hostname (on Unix-alikes) |
| utils::object.size |
| Report the Space Allocated for an Object |
| utils::package.skeleton |
| Create a Skeleton for a New Source Package |
| utils::packageDescription |
| Package Description |
| utils::packageName |
| Find Package Associated with an Environment |
| utils::packageStatus |
| Package Management Tools |
| utils::page |
| Invoke a Pager on an R Object |
| utils::person |
| Persons |
| utils::build |
| Utilities for Building and Checking Add-on Packages |
| utils::process.events |
| Trigger Event Handling |
| utils::prompt |
| Produce Prototype of an R Documentation File |
| utils::promptData |
| Generate Outline Documentation for a Data Set |
| utils::promptPackage |
| Generate a Shell for Documentation of a Package |
| utils::Question |
| Documentation Shortcuts |
| utils::rcompgen |
| A Completion Generator for R |
| utils::Rconsole |
| R for Windows Configuration |
| utils::read.DIF |
| Data Input from Spreadsheet |
| utils::read.fortran |
| Read Fixed-Format Data in a Fortran-like Style |
| utils::read.fwf |
| Read Fixed Width Format Files |
| utils::read.socket |
| Read from or Write to a Socket |
| utils::read.table |
| Data Input |
| utils::readRegistry |
| Read a Windows Registry Hive |
| utils::recover |
| Browsing after an Error |
| utils::relist |
| Allow Re-Listing an unlist()ed Object |
| utils::remove.packages |
| Remove Installed Packages |
| utils::REMOVE |
| Remove Add-on Packages |
| utils::removeSource |
| Remove Stored Source from a Function or Language Object |
| utils::RHOME |
| R Home Directory |
| utils::as.roman |
| Roman Numerals |
| utils::Rprof |
| Enable Profiling of R's Execution |
| utils::Rprofmem |
| Enable Profiling of R's Memory Use |
| utils::Rscript |
| Scripting Front-End for R |
| utils::RShowDoc |
| Show R Manuals and Other Documentation |
| utils::RSiteSearch |
| Search for Key Words or Phrases in Documentation |
| utils::rtags |
| An Etags-like Tagging Utility for R |
| utils::Rtangle |
| R Driver for Stangle |
| utils::RweaveLatex |
| R/LaTeX Driver for Sweave |
| utils::loadhistory |
| Load or Save or Display the Commands History |
| utils::select.list |
| Select Items from a List |
| utils::sessionInfo |
| Collect Information About the Current R Session |
| utils::setRepositories |
| Select Package Repositories |
| utils::setWindowTitle |
| Set the Window Title or the Statusbar of the RGui in Windows |
| utils::SHLIB |
| Build Shared Object/DLL for Dynamic Loading |
| utils::shortPathName |
| Express File Paths in Short Form on Windows |
| utils::getSrcFilename |
| Source Reference Utilities |
| utils::stack |
| Stack or Unstack Vectors from a Data Frame or List |
| utils::str |
| Compactly Display the Structure of an Arbitrary R Object |
| utils::strcapture |
| Capture String Tokens into a data.frame |
| utils::summaryRprof |
| Summarise Output of R Sampling Profiler |
| utils::Sweave |
| Automatic Generation of Reports |
| utils::SweaveSyntConv |
| Convert Sweave Syntax |
| utils::RtangleWritedoc |
| Sweave Driver Utilities |
| utils::tar |
| Create a Tar Archive |
| utils::toLatex |
| Converting R Objects to BibTeX or LaTeX |
| utils::txtProgressBar |
| Text Progress Bar |
| utils::type.convert |
| Convert Data to Appropriate Type |
| utils::untar |
| Extract or List Tar Archives |
| utils::unzip |
| Extract or List Zip Archives |
| utils::update.packages |
| Compare Installed Packages with CRAN-like Repositories |
| utils::url.show |
| Display a Text URL |
| utils::URLencode |
| Encode or Decode (partial) URLs |
| utils::utils-deprecated |
| Deprecated Functions in Package 'utils' |
| utils::utils-package |
| The R Utils Package |
| utils::View |
| Invoke a Data Viewer |
| utils::vignette |
| View, List or Get R Source of Package Vignettes |
| utils::warnErrList |
| Collect and Summarize Errors From List |
| utils::winDialog |
| Dialog Boxes under Windows |
| utils::win.version |
| Get Windows Version |
| utils::winMenuAdd |
| User Menus under MS Windows (Rgui) |
| utils::winProgressBar |
| Progress Bars under MS Windows |
| utils::write.table |
| Data Output |
| utils::zip |
| Create Zip Archives |
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